Literature DB >> 30230100

Combined functions of two RRMs in Dead-end1 mimic helicase activity to promote nanos1 translation in the germline.

Tristan Aguero1, Zhigang Jin2, Dawn Owens1, Arun Malhotra3, Karen Newman1, Jing Yang2, Mary Lou King1.   

Abstract

Dead-end1 (Dnd1) expression is restricted to the vertebrate germline where it is believed to activate translation of messenger RNAs (mRNAs) required to protect and promote that unique lineage. Nanos1 is one such germline mRNA whose translation is blocked by a secondary mRNA structure within the open reading frame (ORF). Dnd1 contains a canonical RNA recognition motif (RRM1) in its N-terminus but also contains a less conserved RRM2. Here we provide a mechanistic picture of the nanos1 mRNA-Dnd1 interaction in the Xenopus germline. We show that RRM1, but not RRM2, is required for binding nanos1. Similar to the zebrafish homolog, Xenopus Dnd1 possesses ATPase activity. Surprisingly, this activity appears to be within the RRM2, different from the C-terminal region where it is found in zebrafish. More importantly, we show that RRM2 is required for nanos1 translation and germline survival. Further, Dnd1 functions as a homodimer and binds nanos1 mRNA just downstream of the secondary structure required for nanos1 repression. We propose a model in which the RRM1 is required to bind nanos1 mRNA while the RRM2 is required to promote translation through the action of ATPase. Dnd1 appears to use RRMs to mimic the function of helicases.
© 2018 Wiley-Liss, Inc.

Entities:  

Keywords:  Dead-end1; Xenopus; germline development; nanos1; translational regulation

Mesh:

Substances:

Year:  2018        PMID: 30230100      PMCID: PMC6294668          DOI: 10.1002/mrd.23062

Source DB:  PubMed          Journal:  Mol Reprod Dev        ISSN: 1040-452X            Impact factor:   2.609


  41 in total

1.  Xenopus Nanos1 is required to prevent endoderm gene expression and apoptosis in primordial germ cells.

Authors:  Fangfang Lai; Amar Singh; Mary Lou King
Journal:  Development       Date:  2012-03-07       Impact factor: 6.868

Review 2.  The DEAD-box protein family of RNA helicases.

Authors:  Olivier Cordin; Josette Banroques; N Kyle Tanner; Patrick Linder
Journal:  Gene       Date:  2005-12-07       Impact factor: 3.688

3.  A dead end for microRNAs.

Authors:  René F Ketting
Journal:  Cell       Date:  2007-12-28       Impact factor: 41.582

4.  Regulation of hub mRNA stability and translation by miR430 and the dead end protein promotes preferential expression in zebrafish primordial germ cells.

Authors:  Michaela Mickoleit; Torsten U Banisch; Erez Raz
Journal:  Dev Dyn       Date:  2011-03       Impact factor: 3.780

Review 5.  RRM-RNA recognition: NMR or crystallography…and new findings.

Authors:  Gerrit M Daubner; Antoine Cléry; Frédéric H-T Allain
Journal:  Curr Opin Struct Biol       Date:  2012-12-14       Impact factor: 6.809

6.  Modulation of the helicase activity of eIF4A by eIF4B, eIF4H, and eIF4F.

Authors:  G W Rogers; N J Richter; W F Lima; W C Merrick
Journal:  J Biol Chem       Date:  2001-06-19       Impact factor: 5.157

7.  Microinjection of Xenopus Oocytes.

Authors:  Tristan Aguero; Karen Newman; Mary Lou King
Journal:  Cold Spring Harb Protoc       Date:  2018-02-01

Review 8.  DEAD-box proteins as RNA helicases and chaperones.

Authors:  Inga Jarmoskaite; Rick Russell
Journal:  Wiley Interdiscip Rev RNA       Date:  2011 Jan-Feb       Impact factor: 9.957

9.  Molecular cloning and expression of dead end homologue in chicken primordial germ cells.

Authors:  Shinya Aramaki; Fuminori Sato; Takako Kato; Tomoki Soh; Yukio Kato; Masa-Aki Hattori
Journal:  Cell Tissue Res       Date:  2007-07-04       Impact factor: 5.249

10.  Control of Dead end localization and activity--implications for the function of the protein in antagonizing miRNA function.

Authors:  Krasimir Slanchev; Juerg Stebler; Mehdi Goudarzi; Vlad Cojocaru; Gilbert Weidinger; Erez Raz
Journal:  Mech Dev       Date:  2008-10-25       Impact factor: 1.882

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  7 in total

1.  Novel functions of the ubiquitin-independent proteasome system in regulating Xenopus germline development.

Authors:  Hyojeong Hwang; Zhigang Jin; Vishnu Vardhan Krishnamurthy; Anumita Saha; Peter S Klein; Benjamin Garcia; Wenyan Mei; Mary Lou King; Kai Zhang; Jing Yang
Journal:  Development       Date:  2019-04-23       Impact factor: 6.868

2.  Biochemical and subcellular characterization of a squid hnRNPA/B-like protein 2 in osmotic stress activated cells reflects molecular properties conserved in this protein family.

Authors:  Gabriel S Lopes; Diego T P Lico
Journal:  Mol Biol Rep       Date:  2022-02-22       Impact factor: 2.742

3.  The RNA-binding protein DND1 acts sequentially as a negative regulator of pluripotency and a positive regulator of epigenetic modifiers required for germ cell reprogramming.

Authors:  Victor A Ruthig; Matthew B Friedersdorf; Jason A Garness; Steve C Munger; Corey Bunce; Jack D Keene; Blanche Capel
Journal:  Development       Date:  2019-07-25       Impact factor: 6.868

4.  Human DND1-RRM2 forms a non-canonical domain swapped dimer.

Authors:  Pooja Kumari; Neel Sarovar Bhavesh
Journal:  Protein Sci       Date:  2021-04-26       Impact factor: 6.993

5.  MC4R mutant mice develop ovarian teratomas.

Authors:  Abdullah An Naser; Takehiro Miyazaki; Jun Wang; Shuji Takabayashi; Theeranukul Pachoensuk; Toshinobu Tokumoto
Journal:  Sci Rep       Date:  2021-02-10       Impact factor: 4.379

6.  In silico analysis of DND1 and its co-expressed genes in human cancers.

Authors:  Yun Zhang; Yafang Li; Dhruv Chachad; Bin Liu; Jyotsna D Godavarthi; Abie Williams-Villalobo; Latifat Lasisi; Shunbin Xiong; Angabin Matin
Journal:  Biochem Biophys Rep       Date:  2022-01-13

Review 7.  The Role of DND1 in Cancers.

Authors:  Yun Zhang; Jyotsna D Godavarthi; Abie Williams-Villalobo; Shahrazad Polk; Angabin Matin
Journal:  Cancers (Basel)       Date:  2021-07-22       Impact factor: 6.639

  7 in total

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