Literature DB >> 31253634

The RNA-binding protein DND1 acts sequentially as a negative regulator of pluripotency and a positive regulator of epigenetic modifiers required for germ cell reprogramming.

Victor A Ruthig1, Matthew B Friedersdorf2, Jason A Garness1, Steve C Munger3, Corey Bunce1, Jack D Keene2, Blanche Capel4.   

Abstract

The adult spermatogonial stem cell population arises from pluripotent primordial germ cells (PGCs) that enter the fetal testis around embryonic day (E)10.5. PGCs undergo rapid mitotic proliferation, then enter prolonged cell cycle arrest (G1/G0), during which they transition to pro-spermatogonia. In mice homozygous for the Ter mutation in the RNA-binding protein Dnd1 (Dnd1Ter/Ter ), many male germ cells (MGCs) fail to enter G1/G0 and instead form teratomas: tumors containing many embryonic cell types. To investigate the origin of these tumors, we sequenced the MGC transcriptome in Dnd1Ter/Ter mutants at E12.5, E13.5 and E14.5, immediately prior to teratoma formation, and correlated this information with DO-RIP-Seq-identified DND1 direct targets. Consistent with previous results, we found DND1 controls downregulation of many genes associated with pluripotency and active cell cycle, including mTor, Hippo and Bmp/Nodal signaling pathway elements. However, DND1 targets also include genes associated with male differentiation, including a large group of chromatin regulators activated in wild-type but not mutant MGCs during the E13.5 and E14.5 transition. Results suggest multiple DND1 functions and link DND1 to initiation of epigenetic modifications in MGCs.
© 2019. Published by The Company of Biologists Ltd.

Entities:  

Keywords:  DO-RIP-Seq; Dnd1; Germ cells; RNAseq; Teratoma

Mesh:

Substances:

Year:  2019        PMID: 31253634      PMCID: PMC6803376          DOI: 10.1242/dev.175950

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  58 in total

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4.  The Ter mutation in the dead end gene causes germ cell loss and testicular germ cell tumours.

Authors:  Kirsten K Youngren; Douglas Coveney; Xiaoning Peng; Chitralekha Bhattacharya; Laura S Schmidt; Michael L Nickerson; Bruce T Lamb; Jian Min Deng; Richard R Behringer; Blanche Capel; Edward M Rubin; Joseph H Nadeau; Angabin Matin
Journal:  Nature       Date:  2005-05-19       Impact factor: 49.962

5.  RNA-binding protein Dnd1 inhibits microRNA access to target mRNA.

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6.  Ultrafast and memory-efficient alignment of short DNA sequences to the human genome.

Authors:  Ben Langmead; Cole Trapnell; Mihai Pop; Steven L Salzberg
Journal:  Genome Biol       Date:  2009-03-04       Impact factor: 13.583

7.  The pluripotency-associated gene Dppa4 is dispensable for embryonic stem cell identity and germ cell development but essential for embryogenesis.

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Journal:  Mol Cell Biol       Date:  2009-03-30       Impact factor: 4.272

8.  Mitotic arrest in teratoma susceptible fetal male germ cells.

Authors:  Patrick S Western; Rachael A Ralli; Stephanie I Wakeling; Camden Lo; Jocelyn A van den Bergen; Denise C Miles; Andrew H Sinclair
Journal:  PLoS One       Date:  2011-06-02       Impact factor: 3.240

9.  Transcripts that associate with the RNA binding protein, DEAD-END (DND1), in embryonic stem (ES) cells.

Authors:  Rui Zhu; Michelina Iacovino; Elisabeth Mahen; Michael Kyba; Angabin Matin
Journal:  BMC Mol Biol       Date:  2011-08-18       Impact factor: 2.946

10.  DND1 maintains germline stem cells via recruitment of the CCR4-NOT complex to target mRNAs.

Authors:  Masashi Yamaji; Miki Jishage; Cindy Meyer; Hemant Suryawanshi; Evan Der; Misaki Yamaji; Aitor Garzia; Pavel Morozov; Sudhir Manickavel; Hannah L McFarland; Robert G Roeder; Markus Hafner; Thomas Tuschl
Journal:  Nature       Date:  2017-03-15       Impact factor: 49.962

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2.  Single-cell RNA sequencing of mitotic-arrested prospermatogonia with DAZL::GFP chickens and revealing unique epigenetic reprogramming of chickens.

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4.  Heading towards a dead end: The role of DND1 in germ line differentiation of human iPSCs.

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Review 5.  Early Gonadal Development and Sex Determination in Mammal.

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6.  The solution structure of Dead End bound to AU-rich RNA reveals an unusual mode of tandem RRM-RNA recognition required for mRNA regulation.

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7.  A homozygous missense variant in DND1 causes non-obstructive azoospermia in humans.

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8.  A transgenic DND1GFP fusion allele reports in vivo expression and RNA-binding targets in undifferentiated mouse germ cells†.

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9.  Mouse dead end1 acts with Nanos2 and Nanos3 to regulate testicular teratoma incidence.

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Review 10.  The Role of DND1 in Cancers.

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  10 in total

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