| Literature DB >> 30221233 |
Dinabandhu Sar1,2, Indrajit Srivastava1,2, Santosh K Misra1,2, Fatemeh Ostadhossein1,2, Parinaz Fathi1,2, Dipanjan Pan1,1,1,2.
Abstract
Tubulin polymerization is critical in mitosis process, which regulates uncontrolled cell divisions. Here, we report a new class of pyrene-pyrazolen> pharmacophore (PPP) for targeting microtubules. Syntheses of sevenEntities:
Year: 2018 PMID: 30221233 PMCID: PMC6130796 DOI: 10.1021/acsomega.8b00320
Source DB: PubMed Journal: ACS Omega ISSN: 2470-1343
Scheme 1Synthesis of Pyrene-Pyrazole Pharmacophore 2a–f,
Reaction conditions: substrate (0.5 mmol), Cu(OTf)2 (10 mol %), toluene (3 mL), 80 °C, air, 2 h.
Isolated yield.
Scheme 2Synthesis of 1-Phenyl-5-(pyren-1-yl)-1H-pyrazole-3-carboxylic Acid 2g
Figure 1In vitro microtubule polymerization assay. Assays were conducted using purified tubulins to form polymerized tubules in presence of various PPPs. An increase in relative fluorescence intensity (RFU) was obtained for paclitaxel (PTXL), along with PPP1 to PPP7, barring PPP5, suggesting that the later supports microtubule formation. RFU decreased for PPP5 with time, suggesting that it inhibits microtubule formation.
Figure 2(a) Coomassie-stained gel lanes for tubulin–dye mixtures, showing two migrating populations, polymerized tubulin (∼130 kDa MW), and α-, β-tubulin (∼50 kDa MW). A representative molecular weight standard lane is also shown across the sample lanes for comparison. (b) Comparison of optical intensity of polymerized tubulin for different mixtures was calculated using FIJI and (c) corresponding fold change was calculated with respect to PPP5–tubulin mixture, which showed the least optical intensity.
Figure 3(a) Structure of α- and β-tubulin, highlighting the different active sites present, namely, GDP, TAX, and GTP; (b) side view of the α-, β-tubulin protein. (c–j) Docking studies were performed to see the binding location of PPP1, PPP4, PPP6, and PPP7 in α-, β-tubulin; and corresponding surface representation was used to show the binding pocket of the docked molecule in α-, β-tubulin.
Different PPP Molecules along with Their ΔG Values and Binding Location after the Docking Studies Were Performed Using Chimeraa
| sample | Δ | binding site |
|---|---|---|
| PPP1 | –7.97 | GDP |
| PPP2 | –7.90 | TAX |
| PPP3 | –8.09 | GDP |
| PPP4 | –8.14 | TAX |
| PPP5 | –7.64 | TAX |
| PPP6 | –6.97 | TAX |
| PPP7 | –8.16 | TAX |
Abbreviation: GDP: guanosine-5′-diphosphate, GTP: guanosine-5′-triphosphate; TAX: taxotere.
Figure 4Functional activity of PPPs in ER (+) breast cancer cells MCF-7. (a) MTT assay results from 48 h treatment of MCF-7 cells at different concentrations. (b) Comparison of cell growth inhibition for different formulations at 10 μM incubation.
Figure 5Functional activity of PPPs in breast cancer cells MDA-MB231 and human melanoma C32 cells. (A) MTT assay results from 48 h treatment of MDA-MB231 cells at different concentrations and (B) comparison of cell growth inhibition for different formulations at 10 μM incubation. (C) MTT assay results from 48 h treatment of C32 cells at 10 and 100 μM and (D) comparison of cell growth inhibition for different formulations at 10 μM incubation. (E) Lower functional activity of PPPs in breast cells MCF-10A of noncancerous origin at 10 μM concentration of representative PPPs for 48 h.
IC50 Values of All of the PPP Analogues across MCF-7, MDA-MB231, and C32 Cell Lines
| PPP1 (μM) | PPP2 (μM) | PPP3 (μM) | PPP4 (μM) | PPP5 (μM) | PPP6 (μM) | PPP7 (μM) | |
|---|---|---|---|---|---|---|---|
| MCF-7 | 60 ± 10 | 34 ± 4 | >100 | 1 ± 0.5 | >100 | 43 ± 5 | 8 ± 2 |
| MDA-MB231 | >100 | 15 ± 5 | >100 | 0.5 ± 0.2 | >100 | >100 | 10 ± 2.0 |
| C32 | >100 | >100 | >100 | 5.0 ± 2.0 | >100 | >100 | 14 ± 2.0 |