Literature DB >> 30220504

Insights into the Evolution of Multicellularity from the Sea Lettuce Genome.

Olivier De Clerck1, Shu-Min Kao2, Kenny A Bogaert3, Jonas Blomme4, Fatima Foflonker5, Michiel Kwantes6, Emmelien Vancaester2, Lisa Vanderstraeten7, Eylem Aydogdu2, Jens Boesger6, Gianmaria Califano6, Benedicte Charrier8, Rachel Clewes9, Andrea Del Cortona10, Sofie D'Hondt3, Noe Fernandez-Pozo11, Claire M Gachon12, Marc Hanikenne13, Linda Lattermann6, Frederik Leliaert14, Xiaojie Liu3, Christine A Maggs15, Zoë A Popper16, John A Raven17, Michiel Van Bel2, Per K I Wilhelmsson11, Debashish Bhattacharya5, Juliet C Coates9, Stefan A Rensing11, Dominique Van Der Straeten7, Assaf Vardi18, Lieven Sterck2, Klaas Vandepoele19, Yves Van de Peer20, Thomas Wichard6, John H Bothwell21.   

Abstract

We report here the 98.5 Mbp haploid genome (12,924 protein coding genes) of Ulva mutabilis, a ubiquitous and iconic representative of the Ulvophyceae or green seaweeds. Ulva's rapid and abundant growth makes it a key contributor to coastal biogeochemical cycles; its role in marine sulfur cycles is particularly important because it produces high levels of dimethylsulfoniopropionate (DMSP), the main precursor of volatile dimethyl sulfide (DMS). Rapid growth makes Ulva attractive biomass feedstock but also increasingly a driver of nuisance "green tides." Ulvophytes are key to understanding the evolution of multicellularity in the green lineage, and Ulva morphogenesis is dependent on bacterial signals, making it an important species with which to study cross-kingdom communication. Our sequenced genome informs these aspects of ulvophyte cell biology, physiology, and ecology. Gene family expansions associated with multicellularity are distinct from those of freshwater algae. Candidate genes, including some that arose following horizontal gene transfer from chromalveolates, are present for the transport and metabolism of DMSP. The Ulva genome offers, therefore, new opportunities to understand coastal and marine ecosystems and the fundamental evolution of the green lineage.
Copyright © 2018 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  DMS; DMSP; Ulva; green seaweeds; multicellularity; phytohormones

Mesh:

Year:  2018        PMID: 30220504     DOI: 10.1016/j.cub.2018.08.015

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  29 in total

1.  Changes in Alternative Splicing in Response to Domestication and Polyploidization in Wheat.

Authors:  Kuohai Yu; Man Feng; Guanghui Yang; Lv Sun; Zhen Qin; Jie Cao; Jingjing Wen; Haoran Li; Yan Zhou; Xiangping Chen; Huiru Peng; Yingyin Yao; Zhaorong Hu; Weilong Guo; Qixin Sun; Zhongfu Ni; Keith Adams; Mingming Xin
Journal:  Plant Physiol       Date:  2020-10-13       Impact factor: 8.340

2.  Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds.

Authors:  Andrea Del Cortona; Christopher J Jackson; François Bucchini; Michiel Van Bel; Sofie D'hondt; Pavel Škaloud; Charles F Delwiche; Andrew H Knoll; John A Raven; Heroen Verbruggen; Klaas Vandepoele; Olivier De Clerck; Frederik Leliaert
Journal:  Proc Natl Acad Sci U S A       Date:  2020-01-07       Impact factor: 11.205

3.  Molecular cloning and transcriptional regulation of two γ-carbonic anhydrase genes in the green macroalga Ulva prolifera.

Authors:  Yu Wang; Feng Liu; Manman Liu; Shitao Shi; Yuping Bi; Nansheng Chen
Journal:  Genetica       Date:  2021-01-15       Impact factor: 1.082

4.  Convergence of sphingolipid desaturation across over 500 million years of plant evolution.

Authors:  Hanno Christoph Resemann; Cornelia Herrfurth; Kirstin Feussner; Ellen Hornung; Anna K Ostendorf; Jasmin Gömann; Jennifer Mittag; Nico van Gessel; Jan de Vries; Jutta Ludwig-Müller; Jennifer Markham; Ralf Reski; Ivo Feussner
Journal:  Nat Plants       Date:  2021-01-25       Impact factor: 15.793

5.  Genome Sequence of the Edible Green Alga Ulva prolifera, Originating from the Yoshinogawa River in Japan.

Authors:  Keita Tamura; Hidemasa Bono
Journal:  Microbiol Resour Announc       Date:  2022-08-29

6.  Standard Candles for Dating Microbial Lineages.

Authors:  Gregory P Fournier; Chris W Parsons; Elise M Cutts; Erik Tamre
Journal:  Methods Mol Biol       Date:  2022

Review 7.  Old Town Roads: routes of auxin biosynthesis across kingdoms.

Authors:  Nicholas Morffy; Lucia C Strader
Journal:  Curr Opin Plant Biol       Date:  2020-03-19       Impact factor: 7.834

8.  A siphonous macroalgal genome suggests convergent functions of homeobox genes in algae and land plants.

Authors:  Asuka Arimoto; Koki Nishitsuji; Yoshimi Higa; Nana Arakaki; Kanako Hisata; Chuya Shinzato; Noriyuki Satoh; Eiichi Shoguchi
Journal:  DNA Res       Date:  2019-04-01       Impact factor: 4.458

9.  Asexual thalli originated from sporophytic thalli via apomeiosis in the green seaweed Ulva.

Authors:  Kensuke Ichihara; Tomokazu Yamazaki; Shinichi Miyamura; Masanori Hiraoka; Shigeyuki Kawano
Journal:  Sci Rep       Date:  2019-09-18       Impact factor: 4.379

Review 10.  Insights into the Regulation of Algal Proteins and Bioactive Peptides Using Proteomic and Transcriptomic Approaches.

Authors:  Lucie Beaulieu
Journal:  Molecules       Date:  2019-05-02       Impact factor: 4.411

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