Literature DB >> 30220026

Selection of aptamers against pathogenic bacteria and their diagnostics application.

Lijun Wang1,2, Ronghui Wang2, Hua Wei3, Yanbin Li4,5.   

Abstract

Aptamers are short nucleotide sequences which can specifically bind to a variety of targets with high affinity. They are identified and selected via systematic evolution of ligands by exponential enrichment (SELEX). Compared to antibodies, aptamers offer several advantages including easy labeling, high stability and lower cost. Those advantages make it possible to be a potential for use as a recognition probe to replace antibody in the diagnostic field. This article is intended to provide a comprehensive review, which is focused on systemizing recent advancements concerning SELEX procedures, with special emphasis on the key steps in SELEX procedures. The principles of various aptamer-based detections of pathogenic bacteria and their application are discussed in detail, including colorimetric detection, fluorescence detection, electrochemical detection, lateral flow strip test, mass sensitive detection and PCR-based aptasensor. By discussing recent research and future trends based on many excellent publications and reviews, we attempt to give the readers a comprehensive view in the field of aptamer selection against pathogenic bacteria and their diagnostics application. Authors hope that this review will promote lively and valuable discussions in order to generate new ideas and approaches towards the development of aptamer-based methods for application in pathogenic bacteria diagnosis.

Keywords:  Aptamer; Diagnostic detection; Pathogenic bacteria; Recognition elements; SELEX

Mesh:

Substances:

Year:  2018        PMID: 30220026     DOI: 10.1007/s11274-018-2528-2

Source DB:  PubMed          Journal:  World J Microbiol Biotechnol        ISSN: 0959-3993            Impact factor:   3.312


  42 in total

1.  Aptamer-conjugated silver nanoparticles for electrochemical dual-aptamer-based sandwich detection of staphylococcus aureus.

Authors:  Abdolkarim Abbaspour; Fatemeh Norouz-Sarvestani; Abolhassan Noori; Noushin Soltani
Journal:  Biosens Bioelectron       Date:  2014-12-18       Impact factor: 10.618

2.  Dual-color upconversion fluorescence and aptamer-functionalized magnetic nanoparticles-based bioassay for the simultaneous detection of Salmonella Typhimurium and Staphylococcus aureus.

Authors:  Nuo Duan; Shijia Wu; Changqing Zhu; Xiaoyuan Ma; Zhouping Wang; Ye Yu; Yuan Jiang
Journal:  Anal Chim Acta       Date:  2012-02-15       Impact factor: 6.558

3.  Pathogen detection in complex samples by quartz crystal microbalance sensor coupled to aptamer functionalized core-shell type magnetic separation.

Authors:  Veli C Ozalp; Gulay Bayramoglu; Zehra Erdem; M Yakup Arica
Journal:  Anal Chim Acta       Date:  2014-10-16       Impact factor: 6.558

4.  A new aptamer/graphene interdigitated gold electrode piezoelectric sensor for rapid and specific detection of Staphylococcus aureus.

Authors:  Yan Lian; Fengjiao He; Huan Wang; Feifei Tong
Journal:  Biosens Bioelectron       Date:  2014-10-16       Impact factor: 10.618

5.  An aptamer-based PCR method coupled with magnetic immunoseparation for sensitive detection of Salmonella Typhimurium in ground turkey.

Authors:  Lijun Wang; Ronghui Wang; Hong Wang; Michael Slavik; Hua Wei; Yanbin Li
Journal:  Anal Biochem       Date:  2017-06-20       Impact factor: 3.365

6.  Bridged Rebar Graphene functionalized aptasensor for pathogenic E. coli O78:K80:H11 detection.

Authors:  Harmanjit Kaur; Munish Shorie; Manju Sharma; Ashok K Ganguli; Priyanka Sabherwal
Journal:  Biosens Bioelectron       Date:  2017-07-05       Impact factor: 10.618

7.  Aptamer cocktails: enhancement of sensing signals compared to single use of aptamers for detection of bacteria.

Authors:  Yeon Seok Kim; Jinyang Chung; Min Young Song; Jongsoo Jurng; Byoung Chan Kim
Journal:  Biosens Bioelectron       Date:  2013-11-12       Impact factor: 10.618

8.  A sensitive method to detect Escherichia coli based on immunomagnetic separation and real-time PCR amplification of aptamers.

Authors:  Hye-Jin Lee; Byoung Chan Kim; Kyung-Woo Kim; Young Keun Kim; Jungbae Kim; Min-Kyu Oh
Journal:  Biosens Bioelectron       Date:  2009-05-18       Impact factor: 10.618

9.  A sensitive gold nanoparticle-based colorimetric aptasensor for Staphylococcus aureus.

Authors:  Jinglei Yuan; Shijia Wu; Nuo Duan; Xiaoyuan Ma; Yu Xia; Jie Chen; Zhansheng Ding; Zhouping Wang
Journal:  Talanta       Date:  2014-04-13       Impact factor: 6.057

Review 10.  Aptamer-Based Technologies in Foodborne Pathogen Detection.

Authors:  Jun Teng; Fang Yuan; Yingwang Ye; Lei Zheng; Li Yao; Feng Xue; Wei Chen; Baoguang Li
Journal:  Front Microbiol       Date:  2016-09-12       Impact factor: 5.640

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  7 in total

Review 1.  Recent advances on aptamer-based biosensors for detection of pathogenic bacteria.

Authors:  Danliang Li; Luyao Liu; Qiaoling Huang; Ting Tong; You Zhou; Zhongyu Li; Qinqin Bai; Hao Liang; Lili Chen
Journal:  World J Microbiol Biotechnol       Date:  2021-02-08       Impact factor: 3.312

2.  Inhibitory effects of aptamer targeted teicoplanin encapsulated PLGA nanoparticles for Staphylococcus aureus strains.

Authors:  Samet Ucak; Mert Sudagidan; Baris A Borsa; Banu Mansuroglu; Veli C Ozalp
Journal:  World J Microbiol Biotechnol       Date:  2020-04-25       Impact factor: 3.312

Review 3.  Chemical Modification of Aptamers for Increased Binding Affinity in Diagnostic Applications: Current Status and Future Prospects.

Authors:  Jan P Elskens; Joke M Elskens; Annemieke Madder
Journal:  Int J Mol Sci       Date:  2020-06-25       Impact factor: 5.923

4.  Rapid Detection of Escherichia coli Antibiotic Susceptibility Using Live/Dead Spectrometry for Lytic Agents.

Authors:  Julia Robertson; Cushla McGoverin; Joni R White; Frédérique Vanholsbeeck; Simon Swift
Journal:  Microorganisms       Date:  2021-04-26

Review 5.  Regulation Mechanism of ssDNA Aptamer in Nanozymes and Application of Nanozyme-Based Aptasensors in Food Safety.

Authors:  Lijun Wang; Hong Zhou; Haixia Hu; Qin Wang; Xianggui Chen
Journal:  Foods       Date:  2022-02-14

6.  Selective Capture and Identification of Methicillin-Resistant Staphylococcus aureus by Combining Aptamer-Modified Magnetic Nanoparticles and Mass Spectrometry.

Authors:  Yu-Chen Liu; Katragunta Kumar; Cheng-Hsiu Wu; Kai-Chih Chang; Cheng-Kang Chiang; Yen-Peng Ho
Journal:  Int J Mol Sci       Date:  2021-06-18       Impact factor: 5.923

Review 7.  Electrochemical Immuno- and Aptamer-Based Assays for Bacteria: Pros and Cons over Traditional Detection Schemes.

Authors:  Rimsha Binte Jamal; Stepan Shipovskov; Elena E Ferapontova
Journal:  Sensors (Basel)       Date:  2020-09-28       Impact factor: 3.576

  7 in total

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