Literature DB >> 30213503

Cross-species molecular dissection across alcohol behavioral domains.

Sean P Farris1, Brien P Riley2, Robert W Williams3, Megan K Mulligan3, Michael F Miles3, Marcelo F Lopez3, Robert Hitzemann4, Ovidiu D Iancu4, Alexander Colville4, Nicole A R Walter4, Priscila Darakjian4, Denesa L Oberbeck4, James B Daunais5, Christina L Zheng4, Robert P Searles4, Shannon K McWeeney4, Kathleen A Grant4, R Dayne Mayfield6.   

Abstract

This review summarizes the proceedings of a symposium presented at the "Alcoholism and Stress: A Framework for Future Treatment Strategies" conference held in Volterra, Italy on May 9-12, 2017. Psychiatric diseases, including alcohol-use disorders (AUDs), are influenced through complex interactions of genes, neurobiological pathways, and environmental influences. A better understanding of the common neurobiological mechanisms underlying an AUD necessitates an integrative approach, involving a systematic assessment of diverse species and phenotype measures. As part of the World Congress on Stress and Alcoholism, this symposium provided a detailed account of current strategies to identify mechanisms underlying the development and progression of AUDs. Dr. Sean Farris discussed the integration and organization of transcriptome and postmortem human brain data to identify brain regional- and cell type-specific differences related to excessive alcohol consumption that are conserved across species. Dr. Brien Riley presented the results of a genome-wide association study of DSM-IV alcohol dependence; although replication of genetic associations with alcohol phenotypes in humans remains challenging, model organism studies show that COL6A3, KLF12, and RYR3 affect behavioral responses to ethanol, and provide substantial evidence for their role in human alcohol-related traits. Dr. Rob Williams expanded upon the systematic characterization of extensive genetic-genomic resources for quantifying and clarifying phenotypes across species that are relevant to precision medicine in human disease. The symposium concluded with Dr. Robert Hitzemann's description of transcriptome studies in a mouse model selectively bred for high alcohol ("binge-like") consumption and a non-human primate model of long-term alcohol consumption. Together, the different components of this session provided an overview of systems-based approaches that are pioneering the experimental prioritization and validation of novel genes and gene networks linked with a range of behavioral phenotypes associated with stress and AUDs.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Alcohol-use disorder; Co-expression networks; Genome-wide association study; RNA-Seq; Recombinant inbred mice; Species conservation; Systems biology; Transcriptome

Mesh:

Substances:

Year:  2017        PMID: 30213503      PMCID: PMC6309876          DOI: 10.1016/j.alcohol.2017.11.036

Source DB:  PubMed          Journal:  Alcohol        ISSN: 0741-8329            Impact factor:   2.405


  117 in total

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Journal:  Neurosci Lett       Date:  2013-09-08       Impact factor: 3.046

Review 2.  Basic neuroscience research with nonhuman primates: a small but indispensable component of biomedical research.

Authors:  Pieter R Roelfsema; Stefan Treue
Journal:  Neuron       Date:  2014-06-18       Impact factor: 17.173

Review 3.  Exploring the neurotransmitter labyrinth in nematodes.

Authors:  D J Brownlee; I Fairweather
Journal:  Trends Neurosci       Date:  1999-01       Impact factor: 13.837

4.  Effects of selection for ethanol preference on gene expression in the nucleus accumbens of HS-CC mice.

Authors:  A M Colville; O D Iancu; D L Oberbeck; P Darakjian; C L Zheng; N A R Walter; C A Harrington; R P Searles; S McWeeney; R J Hitzemann
Journal:  Genes Brain Behav       Date:  2017-02-09       Impact factor: 3.449

5.  The Washington University Twin Study of alcoholism.

Authors:  Carol A Prescott; Constance B Caldwell; Gregory Carey; George P Vogler; Susan L Trumbetta; Irving I Gottesman
Journal:  Am J Med Genet B Neuropsychiatr Genet       Date:  2005-04-05       Impact factor: 3.568

6.  Localization of genes affecting alcohol drinking in mice.

Authors:  T J Phillips; J C Crabbe; P Metten; J K Belknap
Journal:  Alcohol Clin Exp Res       Date:  1994-08       Impact factor: 3.455

7.  Polygenic and single-gene determination of responses to ethanol in BXD/Ty recombinant inbred mouse strains.

Authors:  J C Crabbe; A Kosobud; E R Young; J S Janowsky
Journal:  Neurobehav Toxicol Teratol       Date:  1983 Mar-Apr

8.  Genome-wide association study of alcohol dependence:significant findings in African- and European-Americans including novel risk loci.

Authors:  J Gelernter; H R Kranzler; R Sherva; L Almasy; R Koesterer; A H Smith; R Anton; U W Preuss; M Ridinger; D Rujescu; N Wodarz; P Zill; H Zhao; L A Farrer
Journal:  Mol Psychiatry       Date:  2013-10-29       Impact factor: 15.992

9.  Meta-analysis of RNA-seq expression data across species, tissues and studies.

Authors:  Peter H Sudmant; Maria S Alexis; Christopher B Burge
Journal:  Genome Biol       Date:  2015-12-22       Impact factor: 13.583

10.  L1000CDS2: LINCS L1000 characteristic direction signatures search engine.

Authors:  Qiaonan Duan; St Patrick Reid; Neil R Clark; Zichen Wang; Nicolas F Fernandez; Andrew D Rouillard; Ben Readhead; Sarah R Tritsch; Rachel Hodos; Marc Hafner; Mario Niepel; Peter K Sorger; Joel T Dudley; Sina Bavari; Rekha G Panchal; Avi Ma'ayan
Journal:  NPJ Syst Biol Appl       Date:  2016-08-04
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Review 1.  Current and Future Perspectives of Noncoding RNAs in Brain Function and Neuropsychiatric Disease.

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Journal:  Biol Psychiatry       Date:  2021-08-24       Impact factor: 13.382

2.  Do gene expression findings from mouse models of cocaine use recapitulate human cocaine use disorder in reward circuitry?

Authors:  Spencer B Huggett; Jason A Bubier; Elissa J Chesler; Rohan H C Palmer
Journal:  Genes Brain Behav       Date:  2020-09-15       Impact factor: 3.449

3.  Chronic Voluntary Ethanol Drinking in Cynomolgus Macaques Elicits Gene Expression Changes in Prefrontal Cortical Area 46.

Authors:  Nicole A R Walter; Christina L Zheng; Robert P Searles; Shannon K McWeeney; Kathleen A Grant; Robert Hitzemann
Journal:  Alcohol Clin Exp Res       Date:  2020-01-25       Impact factor: 3.455

Review 4.  Alcohol Sensitivity as an Endophenotype of Alcohol Use Disorder: Exploring Its Translational Utility between Rodents and Humans.

Authors:  Clarissa C Parker; Ryan Lusk; Laura M Saba
Journal:  Brain Sci       Date:  2020-10-13

Review 5.  Using BXD mouse strains in vision research: A systems genetics approach.

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Journal:  Mol Vis       Date:  2020-03-06       Impact factor: 2.367

  5 in total

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