Literature DB >> 34742545

Current and Future Perspectives of Noncoding RNAs in Brain Function and Neuropsychiatric Disease.

Evan J Kyzar1, John Peyton Bohnsack2, Subhash C Pandey3.   

Abstract

Noncoding RNAs (ncRNAs) represent the majority of the transcriptome and play important roles in regulating neuronal functions. ncRNAs are exceptionally diverse in both structure and function and include enhancer RNAs, long ncRNAs, and microRNAs, all of which demonstrate specific temporal and regional expression in the brain. Here, we review recent studies demonstrating that ncRNAs modulate chromatin structure, act as chaperone molecules, and contribute to synaptic remodeling and behavior. In addition, we discuss ncRNA function within the context of neuropsychiatric diseases, particularly focusing on addiction and schizophrenia, and the recent methodological developments that allow for better understanding of ncRNA function in the brain. Overall, ncRNAs represent an underrecognized molecular contributor to complex neuronal processes underlying neuropsychiatric disorders. Published by Elsevier Inc.

Entities:  

Keywords:  Addiction; Epigenetics; Psychiatric disorders; eRNA; lncRNA; miRNA; ncRNA

Mesh:

Substances:

Year:  2021        PMID: 34742545      PMCID: PMC8959010          DOI: 10.1016/j.biopsych.2021.08.013

Source DB:  PubMed          Journal:  Biol Psychiatry        ISSN: 0006-3223            Impact factor:   13.382


  138 in total

1.  Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets.

Authors:  Evan Z Macosko; Anindita Basu; Rahul Satija; James Nemesh; Karthik Shekhar; Melissa Goldman; Itay Tirosh; Allison R Bialas; Nolan Kamitaki; Emily M Martersteck; John J Trombetta; David A Weitz; Joshua R Sanes; Alex K Shalek; Aviv Regev; Steven A McCarroll
Journal:  Cell       Date:  2015-05-21       Impact factor: 41.582

2.  Coexpression networks identify brain region-specific enhancer RNAs in the human brain.

Authors:  Pu Yao; Peijie Lin; Akira Gokoolparsadh; Amelia Assareh; Mike W C Thang; Irina Voineagu
Journal:  Nat Neurosci       Date:  2015-07-13       Impact factor: 24.884

3.  Peripheral blood microRNA levels in females with cocaine use disorder.

Authors:  Thiago Wendt Viola; Bernardo Aguzzoli Heberle; Aline Zaparte; Breno Sanvicente-Vieira; Leonardo Mendes Wainer; Gabriel Rodrigo Fries; Consuelo Walss-Bass; Rodrigo Grassi-Oliveira
Journal:  J Psychiatr Res       Date:  2019-04-02       Impact factor: 4.791

4.  RIC-seq for global in situ profiling of RNA-RNA spatial interactions.

Authors:  Zhaokui Cai; Changchang Cao; Lei Ji; Rong Ye; Di Wang; Cong Xia; Sui Wang; Zongchang Du; Naijing Hu; Xiaohua Yu; Juan Chen; Lei Wang; Xianguang Yang; Shunmin He; Yuanchao Xue
Journal:  Nature       Date:  2020-05-06       Impact factor: 49.962

5.  The Potential Role of Amygdaloid MicroRNA-494 in Alcohol-Induced Anxiolysis.

Authors:  Tara L Teppen; Harish R Krishnan; Huaibo Zhang; Amul J Sakharkar; Subhash C Pandey
Journal:  Biol Psychiatry       Date:  2015-11-26       Impact factor: 13.382

6.  Loss of a mammalian circular RNA locus causes miRNA deregulation and affects brain function.

Authors:  Monika Piwecka; Petar Glažar; Luis R Hernandez-Miranda; Sebastian Memczak; Susanne A Wolf; Agnieszka Rybak-Wolf; Andrei Filipchyk; Filippos Klironomos; Cledi Alicia Cerda Jara; Pascal Fenske; Thorsten Trimbuch; Vera Zywitza; Mireya Plass; Luisa Schreyer; Salah Ayoub; Christine Kocks; Ralf Kühn; Christian Rosenmund; Carmen Birchmeier; Nikolaus Rajewsky
Journal:  Science       Date:  2017-08-10       Impact factor: 47.728

7.  An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles.

Authors:  Christine M Clemson; John N Hutchinson; Sergio A Sara; Alexander W Ensminger; Archa H Fox; Andrew Chess; Jeanne B Lawrence
Journal:  Mol Cell       Date:  2009-02-12       Impact factor: 17.970

Review 8.  MiR-137: an important player in neural development and neoplastic transformation.

Authors:  E Mahmoudi; M J Cairns
Journal:  Mol Psychiatry       Date:  2016-09-13       Impact factor: 15.992

9.  Enhancer RNAs predict enhancer-gene regulatory links and are critical for enhancer function in neuronal systems.

Authors:  Nancy V N Carullo; Robert A Phillips Iii; Rhiana C Simon; Salomon A Roman Soto; Jenna E Hinds; Aaron J Salisbury; Jasmin S Revanna; Kendra D Bunner; Lara Ianov; Faraz A Sultan; Katherine E Savell; Charles A Gersbach; Jeremy J Day
Journal:  Nucleic Acids Res       Date:  2020-09-25       Impact factor: 16.971

10.  Dysregulation of the histone demethylase KDM6B in alcohol dependence is associated with epigenetic regulation of inflammatory signaling pathways.

Authors:  Andrea L Johnstone; Nadja S Andrade; Estelle Barbier; Bohdan B Khomtchouk; Christopher A Rienas; Kenneth Lowe; Derek J Van Booven; Esi Domi; Rustam Esanov; Samara Vilca; Jenica D Tapocik; Keli Rodriguez; Danielle Maryanski; Michael Christopher Keogh; Marcus W Meinhardt; Wolfgang H Sommer; Markus Heilig; Zane Zeier; Claes Wahlestedt
Journal:  Addict Biol       Date:  2019-08-01       Impact factor: 4.280

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  3 in total

Review 1.  Epigenetic Studies for Evaluation of NPS Toxicity: Focus on Synthetic Cannabinoids and Cathinones.

Authors:  Leila Mazdai; Matteo Fabbri; Micaela Tirri; Giorgia Corli; Raffaella Arfè; Beatrice Marchetti; Sabrine Bilel; Eva Bergamin; Rosa Maria Gaudio; Michele Rubini; Fabio De-Giorgio; Matteo Marti
Journal:  Biomedicines       Date:  2022-06-13

2.  HIV-1 Tat and cocaine impact astrocytic energy reservoirs and epigenetic regulation by influencing the LINC01133-hsa-miR-4726-5p-NDUFA9 axis.

Authors:  Mayur Doke; Jay P McLaughlin; James J Cai; Gurudutt Pendyala; Fatah Kashanchi; Mansoor A Khan; Thangavel Samikkannu
Journal:  Mol Ther Nucleic Acids       Date:  2022-07-06       Impact factor: 10.183

3.  Identifying potential therapeutic targets for ischemic stroke through immune infiltration analysis and construction of a programmed cell death‑related ceRNA network.

Authors:  Yiteng Cui; Xin Zhou; Pingping Meng; Shanshan Dong; Ziwei Wang; Tongye Liu; Xiaomin Liu; Yunteng Cui; Yuyang Wang; Qiang Wang
Journal:  Exp Ther Med       Date:  2022-09-21       Impact factor: 2.751

  3 in total

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