Literature DB >> 30190598

Structural basis of mitochondrial transcription.

Hauke S Hillen1, Dmitry Temiakov2,3, Patrick Cramer4.   

Abstract

The mitochondrial genome is transcribed by a single-subunit DNA-dependent RNA polymerase (mtRNAP) and its auxiliary factors. Structural studies have elucidated how mtRNAP cooperates with its dedicated transcription factors to direct RNA synthesis: initiation factors TFAM and TFB2M assist in promoter-DNA binding and opening by mtRNAP while the elongation factor TEFM increases polymerase processivity to the levels required for synthesis of long polycistronic mtRNA transcripts. Here, we review the emerging body of structural and functional studies of human mitochondrial transcription, provide a molecular movie that can be used for teaching purposes and discuss the open questions to guide future directions of investigation.

Entities:  

Mesh:

Substances:

Year:  2018        PMID: 30190598      PMCID: PMC6583890          DOI: 10.1038/s41594-018-0122-9

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  129 in total

1.  Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution.

Authors:  A L Gnatt; P Cramer; J Fu; D A Bushnell; R D Kornberg
Journal:  Science       Date:  2001-04-19       Impact factor: 47.728

2.  A unified polymerase mechanism for nonhomologous DNA and RNA polymerases.

Authors:  T A Steitz; S J Smerdon; J Jäger; C M Joyce
Journal:  Science       Date:  1994-12-23       Impact factor: 47.728

3.  Initiation of transcription from each of the two human mitochondrial promoters requires unique nucleotides at the transcriptional start sites.

Authors:  J E Hixson; D A Clayton
Journal:  Proc Natl Acad Sci U S A       Date:  1985-05       Impact factor: 11.205

4.  tRNA punctuation model of RNA processing in human mitochondria.

Authors:  D Ojala; J Montoya; G Attardi
Journal:  Nature       Date:  1981-04-09       Impact factor: 49.962

5.  Human Mitochondrial Transcription Factor B2 Is Required for Promoter Melting during Initiation of Transcription.

Authors:  Viktor Posse; Claes M Gustafsson
Journal:  J Biol Chem       Date:  2016-12-27       Impact factor: 5.157

6.  Human mitochondrial transcription factor B1 methylates ribosomal RNA at a conserved stem-loop.

Authors:  Bonnie L Seidel-Rogol; Vicki McCulloch; Gerald S Shadel
Journal:  Nat Genet       Date:  2002-12-23       Impact factor: 38.330

7.  Purification and characterization of human mitochondrial transcription factor 1.

Authors:  R P Fisher; D A Clayton
Journal:  Mol Cell Biol       Date:  1988-08       Impact factor: 4.272

8.  Addition of a 29 residue carboxyl-terminal tail converts a simple HMG box-containing protein into a transcriptional activator.

Authors:  D J Dairaghi; G S Shadel; D A Clayton
Journal:  J Mol Biol       Date:  1995-05-26       Impact factor: 5.469

9.  Structures of transcription pre-initiation complex with TFIIH and Mediator.

Authors:  S Schilbach; M Hantsche; D Tegunov; C Dienemann; C Wigge; H Urlaub; P Cramer
Journal:  Nature       Date:  2017-11-01       Impact factor: 49.962

10.  PPR (pentatricopeptide repeat) proteins in mammals: important aids to mitochondrial gene expression.

Authors:  Robert N Lightowlers; Zofia M A Chrzanowska-Lightowlers
Journal:  Biochem J       Date:  2008-11-15       Impact factor: 3.857

View more
  22 in total

1.  Novel paradigms of mitochondrial biology and function: potential clinical significance in the era of precision medicine.

Authors:  Liyang Li; Ajay Goel; Xiangdong Wang
Journal:  Cell Biol Toxicol       Date:  2022-06       Impact factor: 6.691

2.  Phase separation drives the self-assembly of mitochondrial nucleoids for transcriptional modulation.

Authors:  Qi Long; Yanshuang Zhou; Hao Wu; Shiwei Du; Mingli Hu; Juntao Qi; Wei Li; Jingyi Guo; Yi Wu; Liang Yang; Ge Xiang; Liang Wang; Shouhua Ye; Jiayuan Wen; Heng Mao; Junwei Wang; Hui Zhao; Wai-Yee Chan; Jinsong Liu; Yonglong Chen; Pilong Li; Xingguo Liu
Journal:  Nat Struct Mol Biol       Date:  2021-10-28       Impact factor: 15.369

3.  Mesoscale structure-function relationships in mitochondrial transcriptional condensates.

Authors:  Marina Feric; Azadeh Sarfallah; Furqan Dar; Dmitry Temiakov; Rohit V Pappu; Tom Misteli
Journal:  Proc Natl Acad Sci U S A       Date:  2022-10-03       Impact factor: 12.779

4.  Function moves biomolecular condensates in phase space.

Authors:  Marina Feric; Tom Misteli
Journal:  Bioessays       Date:  2022-03-03       Impact factor: 4.653

5.  Mitochondrial transcription factor B1 promotes the progression of hepatocellular carcinoma via enhancing aerobic glycolysis.

Authors:  Jiao Mu; Yiyuan Tian; Fengzhou Liu; Zijun Wang; Rui Tan; Bei Zhang; Penghe Quan; Hongxin Zhang; Jingyue Yang; Peng Yuan
Journal:  J Cell Commun Signal       Date:  2021-11-25       Impact factor: 5.908

Review 6.  Organization and regulation of gene transcription.

Authors:  Patrick Cramer
Journal:  Nature       Date:  2019-08-28       Impact factor: 49.962

Review 7.  Mechanisms and regulation of protein synthesis in mitochondria.

Authors:  Eva Kummer; Nenad Ban
Journal:  Nat Rev Mol Cell Biol       Date:  2021-02-16       Impact factor: 94.444

8.  High expression of the TEFM gene predicts poor prognosis in hepatocellular carcinoma.

Authors:  Zai-Yi Fei; Wei-Si Wang; Su-Fen Li; Jia-Ji Zi; Li Yang; Ting Liu; Song Ao; Qian-Qian Liu; Qing-Hua Cui; Min Yu; Wei Xiong
Journal:  J Gastrointest Oncol       Date:  2020-12

9.  Small-molecule inhibitors of human mitochondrial DNA transcription.

Authors:  Nina A Bonekamp; Bradley Peter; Hauke S Hillen; Andrea Felser; Tim Bergbrede; Axel Choidas; Moritz Horn; Anke Unger; Raffaella Di Lucrezia; Ilian Atanassov; Xinping Li; Uwe Koch; Sascha Menninger; Joanna Boros; Peter Habenberger; Patrick Giavalisco; Patrick Cramer; Martin S Denzel; Peter Nussbaumer; Bert Klebl; Maria Falkenberg; Claes M Gustafsson; Nils-Göran Larsson
Journal:  Nature       Date:  2020-12-16       Impact factor: 49.962

10.  Cryo-EM Structures Reveal Transcription Initiation Steps by Yeast Mitochondrial RNA Polymerase.

Authors:  Brent De Wijngaert; Shemaila Sultana; Anupam Singh; Chhaya Dharia; Hans Vanbuel; Jiayu Shen; Daniel Vasilchuk; Sergio E Martinez; Eaazhisai Kandiah; Smita S Patel; Kalyan Das
Journal:  Mol Cell       Date:  2020-12-04       Impact factor: 17.970

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.