Literature DB >> 3018668

The ribosomal spacer in Xenopus laevis is transcribed as part of the primary ribosomal RNA.

R F De Winter, T Moss.   

Abstract

S1 mapping of Xenopus laevis ribosomal RNA transcripts, both in oocyte microinjection experiments and in vivo, shows that all but 212 bp of the so-called "non-transcribed" spacer (NTS) of the ribosomal DNA repeat is transcribed as part of the primary ribosomal transcript. The 40S pre-ribosomal RNA (pre-rRNA) is therefore a processing intermediate. The primary ribosomal transcript co-terminates with the previously described spacer transcripts [Moss], at a site 213 bp upstream of the 40S pre-rRNA initiation site. This mode of transcription suggests a simple mechanism for the recently proposed phenomenon of "readthrough-enhancement", [Moss et al, Moss], where readthrough transcription from an upstream gene may enhance transcription of a gene immediately downstream in the tandem ribosomal repeat.

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Year:  1986        PMID: 3018668      PMCID: PMC311620          DOI: 10.1093/nar/14.15.6041

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  16 in total

1.  Spacer sequences downstream of the 28S RNA coding region are part of the mouse rDNA transcription unit.

Authors:  I Grummt; H Sorbaz; A Hofmann; E Roth
Journal:  Nucleic Acids Res       Date:  1985-04-11       Impact factor: 16.971

Review 2.  The promotion of ribosomal transcription in eukaryotes.

Authors:  T Moss; K Mitchelson; R de Winter
Journal:  Oxf Surv Eukaryot Genes       Date:  1985

3.  Extrachromosomal nucleolar genes in amphibian oocytes.

Authors:  O L Miller; B R Beatty
Journal:  Genetics       Date:  1969       Impact factor: 4.562

4.  Transcription of cloned Xenopus ribosomal genes visualised after injection into oocyte nuclei.

Authors:  M F Trendelenburg; J B Gurdon
Journal:  Nature       Date:  1978-11-16       Impact factor: 49.962

5.  Transcription of mouse rDNA terminates downstream of the 3' end of 28S RNA and involves interaction of factors with repeated sequences in the 3' spacer.

Authors:  I Grummt; U Maier; A Ohrlein; N Hassouna; J P Bachellerie
Journal:  Cell       Date:  1985-12       Impact factor: 41.582

Review 6.  The ribosomal RNA cistrons.

Authors:  M L Birnstiel; M Chipchase; J Speirs
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1971

7.  Chromatin structure of Xenopus rDNA transcription termination sites. Evidence for a two-step process of transcription termination.

Authors:  M F Trendelenburg
Journal:  Chromosoma       Date:  1982       Impact factor: 4.316

8.  Sites of transcription initiation in vivo on Xenopus laevis ribosomal DNA.

Authors:  R H Reeder; B Sollner-Webb; H L Wahn
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

9.  Characterization of three sites of RNA 3' end formation in the Xenopus ribosomal gene spacer.

Authors:  P Labhart; R H Reeder
Journal:  Cell       Date:  1986-05-09       Impact factor: 41.582

10.  Transcription of cloned Xenopus laevis ribosomal DNA microinjected into Xenopus oocytes, and the identification of an RNA polymerase I promoter.

Authors:  T Moss
Journal:  Cell       Date:  1982-10       Impact factor: 41.582

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  24 in total

Review 1.  Nucleolar DNA: the host and the guests.

Authors:  E Smirnov; D Cmarko; T Mazel; M Hornáček; I Raška
Journal:  Histochem Cell Biol       Date:  2016-02-04       Impact factor: 4.304

2.  Termination of transcription by yeast RNA polymerase I.

Authors:  C A van der Sande; T Kulkens; A B Kramer; I J de Wijs; H van Heerikhuizen; J Klootwijk; R J Planta
Journal:  Nucleic Acids Res       Date:  1989-11-25       Impact factor: 16.971

3.  Sequences within the spacer region of yeast rRNA cistrons that stimulate 35S rRNA synthesis in vivo mediate RNA polymerase I-dependent promoter and terminator activities.

Authors:  R Mestel; M Yip; J P Holland; E Wang; J Kang; M J Holland
Journal:  Mol Cell Biol       Date:  1989-03       Impact factor: 4.272

4.  Ribosomal RNA genes in plants: variability in copy number and in the intergenic spacer.

Authors:  S O Rogers; A J Bendich
Journal:  Plant Mol Biol       Date:  1987-09       Impact factor: 4.076

5.  The Xenopus 9 bp ribosomal terminator (T3 box) is a pause signal for the RNA polymerase I elongation complex.

Authors:  P Labhart
Journal:  Nucleic Acids Res       Date:  1995-06-25       Impact factor: 16.971

6.  Mapping of ribosomal RNA transcripts in wheat.

Authors:  M Vincentz; R B Flavell
Journal:  Plant Cell       Date:  1989-06       Impact factor: 11.277

7.  High initiation rates at the ribosomal gene promoter do not depend upon spacer transcription.

Authors:  P Labhart; R H Reeder
Journal:  Proc Natl Acad Sci U S A       Date:  1989-05       Impact factor: 11.205

8.  Replication fork barriers in the Xenopus rDNA.

Authors:  B Wiesendanger; R Lucchini; T Koller; J M Sogo
Journal:  Nucleic Acids Res       Date:  1994-11-25       Impact factor: 16.971

Review 9.  Synthesis of ribosomes in Saccharomyces cerevisiae.

Authors:  J R Warner
Journal:  Microbiol Rev       Date:  1989-06

10.  Characterization of factors that direct transcription of rat ribosomal DNA.

Authors:  S D Smith; E Oriahi; D Lowe; H F Yang-Yen; D O'Mahony; K Rose; K Chen; L I Rothblum
Journal:  Mol Cell Biol       Date:  1990-06       Impact factor: 4.272

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