Literature DB >> 2535511

Mapping of ribosomal RNA transcripts in wheat.

M Vincentz1, R B Flavell.   

Abstract

Ribosomal RNA transcripts in wheat have been studied by RNA gel blotting and their termini determined from electrophoretic analysis of S1 nuclease-resistant RNA/DNA hybrids and also of hybrids created by primer extension. A major putative transcription initiation site has been localized 1132 base pairs upstream from the 5' end of the 18S RNA sequence. A major putative processing site occurs 640 base pairs from the 5' end of the 18S RNA. Transcripts extending at least 750 base pairs beyond the 3' end of the 25S rRNA sequence into the array of intergenic repeats are present, as are transcripts covering the principal initiation sequence. This suggests that some transcripts extend through the intergenic DNA from one repeat unit into the next.

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Year:  1989        PMID: 2535511      PMCID: PMC159793          DOI: 10.1105/tpc.1.6.579

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  29 in total

1.  Mass isolation of viable wheat embryos.

Authors:  F B JOHNSTON; H STERN
Journal:  Nature       Date:  1957-01-19       Impact factor: 49.962

2.  Occurrence of 9 homologous repeat units in the external spacer region of a nuclear maize rRNA gene unit.

Authors:  C Toloczyki; G Feix
Journal:  Nucleic Acids Res       Date:  1986-06-25       Impact factor: 16.971

3.  The ribosomal spacer in Xenopus laevis is transcribed as part of the primary ribosomal RNA.

Authors:  R F De Winter; T Moss
Journal:  Nucleic Acids Res       Date:  1986-08-11       Impact factor: 16.971

4.  A transcriptional terminator is a novel element of the promoter of the mouse ribosomal RNA gene.

Authors:  S Henderson; B Sollner-Webb
Journal:  Cell       Date:  1986-12-26       Impact factor: 41.582

5.  A complex array of sequences enhances ribosomal transcription in Xenopus laevis.

Authors:  R F De Winter; T Moss
Journal:  J Mol Biol       Date:  1987-08-20       Impact factor: 5.469

Review 6.  Transcription of cloned eukaryotic ribosomal RNA genes.

Authors:  B Sollner-Webb; J Tower
Journal:  Annu Rev Biochem       Date:  1986       Impact factor: 23.643

7.  Multiple Pol I initiation sequences in rDNA spacers of Drosophila melanogaster.

Authors:  E S Coen; G A Dover
Journal:  Nucleic Acids Res       Date:  1982-11-11       Impact factor: 16.971

8.  Nontranscribed spacer sequences promote in vitro transcription of Drosophila ribosomal DNA.

Authors:  B D Kohorn; P M Rae
Journal:  Nucleic Acids Res       Date:  1982-11-11       Impact factor: 16.971

9.  A transcription terminator located upstream of the mouse rDNA initiation site affects rRNA synthesis.

Authors:  I Grummt; A Kuhn; I Bartsch; H Rosenbauer
Journal:  Cell       Date:  1986-12-26       Impact factor: 41.582

10.  A termination site for Xenopus RNA polymerase I also acts as an element of an adjacent promoter.

Authors:  B McStay; R H Reeder
Journal:  Cell       Date:  1986-12-26       Impact factor: 41.582

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  15 in total

1.  Characterization of nucleotide sequences that interact with a nuclear protein fraction in rRNA gene of Vicia faba.

Authors:  T Nakajima; A Suzůki; S Tanifuji; A Kato
Journal:  Plant Mol Biol       Date:  1992-12       Impact factor: 4.076

2.  Protein-binding to reiterated motifs within the wheat rRNA gene promoter and upstream repeats.

Authors:  S D Jackson; R B Flavell
Journal:  Plant Mol Biol       Date:  1992-12       Impact factor: 4.076

3.  Transcription and tyranny in the nucleolus: the organization, activation, dominance and repression of ribosomal RNA genes.

Authors:  Craig S Pikaard
Journal:  Arabidopsis Book       Date:  2002-08-12

4.  The structure of the large spacer region of the rDNA in Vicia faba and Pisum sativum.

Authors:  A Kato; T Nakajima; J Yamashita; K Yakura; S Tanifuji
Journal:  Plant Mol Biol       Date:  1990-06       Impact factor: 4.076

5.  The complete nucleotide sequence of the intergenic spacer between 25S and 17S rDNAs in rice.

Authors:  F Takaiwa; S Kikuchi; K Oono
Journal:  Plant Mol Biol       Date:  1990-12       Impact factor: 4.076

6.  The nucleotide sequence of the rDNA spacer region between the 25S and 18S rRNA genes in a species of the genus Vicia, V. hirsuta.

Authors:  K Yakura; K Nishikawa
Journal:  Plant Mol Biol       Date:  1992-06       Impact factor: 4.076

7.  Length heterogeneity of the rRNA precursor in cucumber (Cucumis sativus).

Authors:  U Zentgraf; M Ganal; V Hemleben
Journal:  Plant Mol Biol       Date:  1990-09       Impact factor: 4.076

Review 8.  Small nucleolar RNAs and pre-rRNA processing in plants.

Authors:  J W Brown; P J Shaw
Journal:  Plant Cell       Date:  1998-05       Impact factor: 11.277

9.  Analysis of the ribosomal RNA gene repeat from the moss Funaria hygrometrica.

Authors:  I Capesius
Journal:  Plant Mol Biol       Date:  1997-02       Impact factor: 4.076

10.  Functional analysis of Arabidopsis thaliana rRNA gene and spacer promoters in vivo and by transient expression.

Authors:  J H Doelling; R J Gaudino; C S Pikaard
Journal:  Proc Natl Acad Sci U S A       Date:  1993-08-15       Impact factor: 11.205

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