| Literature DB >> 30184304 |
Nasrollah Rezaei-Ghaleh1, Giacomo Parigi2, Andrea Soranno3,4, Andrea Holla4, Stefan Becker5, Benjamin Schuler4, Claudio Luchinat2, Markus Zweckstetter1.
Abstract
Intrinsically disordered proteins (IDPs) experience a diverse spectrum of motions that are difficult to characterize with a single experimental technique. Herein we combine high- and low-field nuclear spin relaxation, nanosecond fluorescence correlation spectroscopy (nsFCS), and long molecular dynamics simulations of alpha-synuclein, an IDP involved in Parkinson disease, to obtain a comprehensive picture of its conformational dynamics. The combined analysis shows that fast motions below 2 ns caused by local dihedral angle fluctuations and conformational sampling within and between Ramachandran substates decorrelate most of the backbone N-H orientational memory. However, slow motions with correlation times of up to ca. 13 ns from segmental dynamics are present throughout the alpha-synuclein chain, in particular in its C-terminal domain, and global chain reconfiguration occurs on a timescale of ca. 60 ns. Our study demonstrates a powerful strategy to determine residue-specific protein dynamics in IDPs at different time and length scales.Entities:
Keywords: NMR spectroscopy; intrinsically disordered proteins; protein dynamics
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Year: 2018 PMID: 30184304 DOI: 10.1002/anie.201808172
Source DB: PubMed Journal: Angew Chem Int Ed Engl ISSN: 1433-7851 Impact factor: 15.336