Literature DB >> 30168205

A comparison of coil combination strategies in 3D multi-channel MRSI reconstruction for patients with brain tumors.

Maryam Vareth1,2, Janine Lupo1,2, Peder Larson1,2, Sarah Nelson1,2.   

Abstract

The goal of this study was to find the most robust algorithm for a phase-sensitive coil combination of 3D single-cycle and lactate-edited, multi-channel H-1 point-resolved spectroscopy (PRESS) localized echo planar spectroscopic imaging (EPSI) data for clinical applications in the brain. Data were acquired over 5-10 minutes at 3T using 8- or 32-channel array coils. Peak referencing with residual water and N-acetyl-aspartate, first-point phasing, generalized least squared (GLS) and whitened singular-value decomposition (WSVD) combination algorithms were evaluated relative to unsuppressed water with data from a phantom, six volunteers and 55 patients with brain tumors. Comparison metrics were signal-to-noise ratio, coefficient of variance and percent signal increase. Where residual water was present, using it as a reference peak for phasing and weighting factors from an imaging calibration scan gave the best overall performance. Greater improvement was seen for large selected volumes (>720 cm3 ) and for the 32-channel array (25%) compared with the 8-channel array (19%). Applying voxel-by-voxel phase corrections produced a larger increase in performance for the 32- versus 8-channel coil. We conclude that, for clinically relevant 3D H-1 PRESS localized EPSI studies, the most robust technique employed individual phase maps generated from high residual water and individual amplitude maps generated from calibration scans.
© 2018 John Wiley & Sons, Ltd.

Entities:  

Keywords:  GLS; PRESS localization; WSVD; coil combination techniques; first-point phasing; lactate editing; multichannel EPSI; peak referencing

Mesh:

Substances:

Year:  2018        PMID: 30168205      PMCID: PMC6290901          DOI: 10.1002/nbm.3929

Source DB:  PubMed          Journal:  NMR Biomed        ISSN: 0952-3480            Impact factor:   4.044


  47 in total

1.  Dualband spectral-spatial RF pulses for prostate MR spectroscopic imaging.

Authors:  A A Schricker; J M Pauly; J Kurhanewicz; M G Swanson; D B Vigneron
Journal:  Magn Reson Med       Date:  2001-12       Impact factor: 4.668

2.  Improved optimization for the robust and accurate linear registration and motion correction of brain images.

Authors:  Mark Jenkinson; Peter Bannister; Michael Brady; Stephen Smith
Journal:  Neuroimage       Date:  2002-10       Impact factor: 6.556

3.  Time-domain combination of MR spectroscopy data acquired using phased-array coils.

Authors:  Mark A Brown
Journal:  Magn Reson Med       Date:  2004-11       Impact factor: 4.668

4.  Optimal phased-array combination for spectroscopy.

Authors:  Mark Bydder; Gavin Hamilton; Takeshi Yokoo; Claude B Sirlin
Journal:  Magn Reson Imaging       Date:  2008-05-16       Impact factor: 2.546

5.  Proton spectroscopic imaging of the human brain using phased array detectors.

Authors:  L L Wald; S E Moyher; M R Day; S J Nelson; D B Vigneron
Journal:  Magn Reson Med       Date:  1995-09       Impact factor: 4.668

6.  Use of tissue water as a concentration reference for proton spectroscopic imaging.

Authors:  Charles Gasparovic; Tao Song; Deidre Devier; H Jeremy Bockholt; Arvind Caprihan; Paul G Mullins; Stefan Posse; Rex E Jung; Leslie A Morrison
Journal:  Magn Reson Med       Date:  2006-06       Impact factor: 4.668

7.  Reduced lipid contamination in in vivo 1H MRSI using time-domain fitting and neural network classification.

Authors:  R de Beer; F Michels; D van Ormondt; B P van Tongeren; P R Luyten; H van Vroonhoven
Journal:  Magn Reson Imaging       Date:  1993       Impact factor: 2.546

8.  Implementation of 3 T lactate-edited 3D 1H MR spectroscopic imaging with flyback echo-planar readout for gliomas patients.

Authors:  Ilwoo Park; Albert P Chen; Matthew L Zierhut; Esin Ozturk-Isik; Daniel B Vigneron; Sarah J Nelson
Journal:  Ann Biomed Eng       Date:  2010-07-23       Impact factor: 3.934

9.  (1)H spectroscopic imaging of human brain at 3 Tesla: comparison of fast three-dimensional magnetic resonance spectroscopic imaging techniques.

Authors:  Matthew L Zierhut; Esin Ozturk-Isik; Albert P Chen; Ilwoo Park; Daniel B Vigneron; Sarah J Nelson
Journal:  J Magn Reson Imaging       Date:  2009-09       Impact factor: 4.813

10.  Methodology for improved detection of low concentration metabolites in MRS: optimised combination of signals from multi-element coil arrays.

Authors:  Emma L Hall; Mary C Stephenson; Darren Price; Peter G Morris
Journal:  Neuroimage       Date:  2013-04-29       Impact factor: 6.556

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  8 in total

1.  Tensor image enhancement and optimal multichannel receiver combination analyses for human hyperpolarized 13 C MRSI.

Authors:  Hsin-Yu Chen; Adam W Autry; Jeffrey R Brender; Shun Kishimoto; Murali C Krishna; Maryam Vareth; Robert A Bok; Galen D Reed; Lucas Carvajal; Jeremy W Gordon; Mark van Criekinge; David E Korenchan; Albert P Chen; Duan Xu; Yan Li; Susan M Chang; John Kurhanewicz; Peder E Z Larson; Daniel B Vigneron
Journal:  Magn Reson Med       Date:  2020-06-05       Impact factor: 4.668

Review 2.  Methodological consensus on clinical proton MRS of the brain: Review and recommendations.

Authors:  Martin Wilson; Ovidiu Andronesi; Peter B Barker; Robert Bartha; Alberto Bizzi; Patrick J Bolan; Kevin M Brindle; In-Young Choi; Cristina Cudalbu; Ulrike Dydak; Uzay E Emir; Ramon G Gonzalez; Stephan Gruber; Rolf Gruetter; Rakesh K Gupta; Arend Heerschap; Anke Henning; Hoby P Hetherington; Petra S Huppi; Ralph E Hurd; Kejal Kantarci; Risto A Kauppinen; Dennis W J Klomp; Roland Kreis; Marijn J Kruiskamp; Martin O Leach; Alexander P Lin; Peter R Luijten; Małgorzata Marjańska; Andrew A Maudsley; Dieter J Meyerhoff; Carolyn E Mountford; Paul G Mullins; James B Murdoch; Sarah J Nelson; Ralph Noeske; Gülin Öz; Julie W Pan; Andrew C Peet; Harish Poptani; Stefan Posse; Eva-Maria Ratai; Nouha Salibi; Tom W J Scheenen; Ian C P Smith; Brian J Soher; Ivan Tkáč; Daniel B Vigneron; Franklyn A Howe
Journal:  Magn Reson Med       Date:  2019-03-28       Impact factor: 4.668

Review 3.  Application of 7T MRS to High-Grade Gliomas.

Authors:  L McCarthy; G Verma; G Hangel; A Neal; B A Moffat; J P Stockmann; O C Andronesi; P Balchandani; C G Hadjipanayis
Journal:  AJNR Am J Neuroradiol       Date:  2022-05-26       Impact factor: 4.966

4.  First hyperpolarized [2-13C]pyruvate MR studies of human brain metabolism.

Authors:  Brian T Chung; Hsin-Yu Chen; Jeremy Gordon; Daniele Mammoli; Renuka Sriram; Adam W Autry; Lydia M Le Page; Myriam M Chaumeil; Peter Shin; James Slater; Chou T Tan; Chris Suszczynski; Susan Chang; Yan Li; Robert A Bok; Sabrina M Ronen; Peder E Z Larson; John Kurhanewicz; Daniel B Vigneron
Journal:  J Magn Reson       Date:  2019-10-08       Impact factor: 2.229

5.  Accelerated J-resolved 1 H-MRSI with limited and sparse sampling of ( k , t 1 , t 2 -space.

Authors:  Lihong Tang; Yibo Zhao; Yudu Li; Rong Guo; Bryan Clifford; Georges El Fakhri; Chao Ma; Zhi-Pei Liang; Jie Luo
Journal:  Magn Reson Med       Date:  2020-07-29       Impact factor: 4.668

Review 6.  Developments in proton MR spectroscopic imaging of prostate cancer.

Authors:  Angeliki Stamatelatou; Tom W J Scheenen; Arend Heerschap
Journal:  MAGMA       Date:  2022-04-20       Impact factor: 2.533

7.  Hyperpolarized 13 C MRI data acquisition and analysis in prostate and brain at University of California, San Francisco.

Authors:  Jason C Crane; Jeremy W Gordon; Hsin-Yu Chen; Adam W Autry; Yan Li; Marram P Olson; John Kurhanewicz; Daniel B Vigneron; Peder E Z Larson; Duan Xu
Journal:  NMR Biomed       Date:  2020-03-19       Impact factor: 4.044

8.  Coil Combination of Multichannel Single Voxel Magnetic Resonance Spectroscopy with Repeatedly Sampled In Vivo Data.

Authors:  Wanqi Hu; Huiting Liu; Dicheng Chen; Tianyu Qiu; Hongwei Sun; Chunyan Xiong; Jianzhong Lin; Di Guo; Hao Chen; Xiaobo Qu
Journal:  Molecules       Date:  2021-06-25       Impact factor: 4.411

  8 in total

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