Literature DB >> 3015766

The human ribosomal RNA genes: structure and organization of the complete repeating unit.

J E Sylvester, D A Whiteman, R Podolsky, J M Pozsgay, J Respess, R D Schmickel.   

Abstract

The complete repeating unit of the human ribosomal RNA gene has been reconstructed by the cloning of approximately 27 kilobases (kb) of non-transcribed spacer. The structure of this tandemly repeated gene can now be studied in its entirety. We report the analysis of spacer DNA by molecular cloning and its organization in the genome by Southern transfer analysis. These studies reveal both length and sequence variation of the spacer. Sequence variations are distributed throughout the spacer while the length variations exist near the 5' end of the transcript and just beyond the 3' end. The human spacer shares extensive homology with primates but little with other mammals. Within the primates the degree of homology reflects the rapid evolutionary changes characteristic of the primate group.

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Year:  1986        PMID: 3015766     DOI: 10.1007/bf00401226

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  26 in total

1.  A molecular basis for discrete size variation in human ribosomal DNA.

Authors:  J M Erickson; R D Schmickel
Journal:  Am J Hum Genet       Date:  1985-03       Impact factor: 11.025

2.  Packaging recombinant DNA molecules into bacteriophage particles in vitro.

Authors:  B Hohn; K Murray
Journal:  Proc Natl Acad Sci U S A       Date:  1977-08       Impact factor: 11.205

3.  Characterization of rat ribosomal DNA II. identification of the highly repetitive DNA in the 3' non-transcribed spacer.

Authors:  H F Yang-Yen; C S Subrahmanyam; B Cassidy; L I Rothblum
Journal:  J Mol Biol       Date:  1985-08-05       Impact factor: 5.469

4.  Variation among human 28S ribosomal RNA genes.

Authors:  I L Gonzalez; J L Gorski; T J Campen; D J Dorney; J M Erickson; J E Sylvester; R D Schmickel
Journal:  Proc Natl Acad Sci U S A       Date:  1985-11       Impact factor: 11.205

5.  Dual pathways for ribonucleic acid turnover in WI-38 but not in I-cell human diploid fibroblasts.

Authors:  M Sameshima; S A Liebhaber; D Schlessinger
Journal:  Mol Cell Biol       Date:  1981-01       Impact factor: 4.272

6.  Organization of ribosomal RNA gene repeats of the mouse.

Authors:  R Kominami; Y Urano; Y Mishima; M Muramatsu
Journal:  Nucleic Acids Res       Date:  1981-07-24       Impact factor: 16.971

7.  Structure and variation of human ribosomal DNA: molecular analysis of cloned fragments.

Authors:  J M Erickson; C L Rushford; D J Dorney; G N Wilson; R D Schmickel
Journal:  Gene       Date:  1981-12       Impact factor: 3.688

8.  Identification of the in vivo and in vitro origin of transcription in human rDNA.

Authors:  R Miesfeld; N Arnheim
Journal:  Nucleic Acids Res       Date:  1982-07-10       Impact factor: 16.971

9.  Individual and evolutionary variation of primate ribosomal DNA transcription initiation regions.

Authors:  G N Wilson; M Knoller; L L Szura; R D Schmickel
Journal:  Mol Biol Evol       Date:  1984-04       Impact factor: 16.240

10.  Human ribosomal RNA gene spacer sequences are found interspersed elsewhere in the genome.

Authors:  R Higuchi; H D Stang; J K Browne; M O Martin; M Huot; J Lipeles; W Salser
Journal:  Gene       Date:  1981-11       Impact factor: 3.688

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  30 in total

1.  A high-resolution physical map of human chromosome 21p using yeast artificial chromosomes.

Authors:  S Y Wang; M Cruts; J Del-Favero; Y Zhang; F Tissir; M C Potier; D Patterson; D Nizetic; A Bosch; H Chen; L Bennett; X Estivill; A Kessling; S E Antonarakis; C van Broeckhoven
Journal:  Genome Res       Date:  1999-11       Impact factor: 9.043

2.  Initiation of nucleolar assembly is independent of RNA polymerase I transcription.

Authors:  T Dousset; C Wang; C Verheggen; D Chen; D Hernandez-Verdun; S Huang
Journal:  Mol Biol Cell       Date:  2000-08       Impact factor: 4.138

3.  Detection of recombinant products during PCR amplification of DNA containing direct alu repeats.

Authors:  D V Shibalev; A S Voronov; V N Bashkirov; N S Kupriyanova; A P Ryskov
Journal:  Dokl Biochem Biophys       Date:  2003 Jan-Feb       Impact factor: 0.788

Review 4.  Nucleolar DNA: the host and the guests.

Authors:  E Smirnov; D Cmarko; T Mazel; M Hornáček; I Raška
Journal:  Histochem Cell Biol       Date:  2016-02-04       Impact factor: 4.304

5.  In vivo sequencing of camptothecin-induced topoisomerase I cleavage sites in human colon carcinoma cells.

Authors:  C Pondarré; D Strumberg; A Fujimori; R Torres-León; Y Pommier
Journal:  Nucleic Acids Res       Date:  1997-10-15       Impact factor: 16.971

6.  Evidence for involvement of TRE-2 (USP6) oncogene, low-copy repeat and acrocentric heterochromatin in two families with chromosomal translocations.

Authors:  Zhishuo Ou; Małgorzata Jarmuz; Steven P Sparagana; Jacques Michaud; Jean-Claude Décarie; Svetlana A Yatsenko; Beata Nowakowska; Patti Furman; Chad A Shaw; Lisa G Shaffer; James R Lupski; A Craig Chinault; Sau W Cheung; Paweł Stankiewicz
Journal:  Hum Genet       Date:  2006-06-22       Impact factor: 4.132

7.  Extreme variant of the short arm of chromosome 15.

Authors:  U Friedrich; M Caprani; E Niebuhr; A J Therkelsen; A L Jørgensen
Journal:  Hum Genet       Date:  1996-06       Impact factor: 4.132

8.  Cloning of a polymorphic sequence from the nontranscribed spacer of horse rDNA.

Authors:  M Anglana; L Bertoni; E Giulotto
Journal:  Mamm Genome       Date:  1996-07       Impact factor: 2.957

9.  Replication initiation and elongation fork rates within a differentially expressed human multicopy locus in early S phase.

Authors:  R S Scott; K Y Truong; J M Vos
Journal:  Nucleic Acids Res       Date:  1997-11-15       Impact factor: 16.971

10.  Telomere disruption results in non-random formation of de novo dicentric chromosomes involving acrocentric human chromosomes.

Authors:  Kaitlin M Stimpson; Ihn Young Song; Anna Jauch; Heidi Holtgreve-Grez; Karen E Hayden; Joanna M Bridger; Beth A Sullivan
Journal:  PLoS Genet       Date:  2010-08-12       Impact factor: 5.917

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