| Literature DB >> 30150565 |
Boyang Liu1, Xiang Gao2, Jun Ma3, Zhihui Jiao4, Jianhua Xiao5, Hongbin Wang6.
Abstract
Culex tritaeniorhynchus is an important vector that transmits a variety of human and animal diseases. Japanese encephalitis (JE), an endemic disease in the Asia-Pacific region, is primarily transmitted by Cx. tritaeniorhynchus. Insufficient monitoring of vector mosquitoes has led to a poor understanding of the distribution of Cx. tritaeniorhynchus in China. To delineate the habitat of Cx. tritaeniorhynchus and any host and environmental factors that affect its distribution, we used a maximum entropy modeling method to predict its distribution in China. Our models provided high resolution predictions on the potential distribution of Cx. tritaeniorhynchus. The predicted suitable habitats of the JE vector were correlated with areas of high JE incidence in parts of China. Factors driving the distribution of Cx. tritaeniorhynchus in China were also revealed by our models. Furthermore, human population density and the maximum NDVI were the most important predictors in our models. Bioclimate factors and elevation also significantly impacted the distribution of Cx. tritaeniorhynchus. Our findings may serve as a reference for vector and disease control.Entities:
Keywords: Culex tritaeniorhynchus; Japanese encephalitis; environmental factors; host; maximum entropy model; mosquito-borne zoonosis
Mesh:
Year: 2018 PMID: 30150565 PMCID: PMC6165309 DOI: 10.3390/ijerph15091848
Source DB: PubMed Journal: Int J Environ Res Public Health ISSN: 1660-4601 Impact factor: 3.390
Variables used in the modeling.
| Variable | Description | Date | Resolution | Source |
|---|---|---|---|---|
| Bio1 | Annual mean temperature | 1970–2000 | 30 arc sec | WorldClim a |
| Bio2 | Mean diurnal range | 1970–2000 | 30 arc sec | WorldClim a |
| Bio3 | Isothermality | 1970–2000 | 30 arc sec | WorldClim a |
| Bio4 | Temperature seasonality | 1970–2000 | 30 arc sec | WorldClim a |
| Bio5 | Maximum temperature of the warmest month | 1970–2000 | 30 arc sec | WorldClim a |
| Bio6 | Minimum temperature of the coldest month | 1970–2000 | 30 arc sec | WorldClim a |
| Bio7 | Temperature annual range | 1970–2000 | 30 arc sec | WorldClim a |
| Bio8 | Mean temperature of the wettest quarter | 1970–2000 | 30 arc sec | WorldClim a |
| Bio9 | Mean temperature of the driest quarter | 1970–2000 | 30 arc sec | WorldClim a |
| Bio10 | Mean temperature of the warmest quarter | 1970–2000 | 30 arc sec | WorldClim a |
| Bio11 | Mean temperature of the coldest quarter | 1970–2000 | 30 arc sec | WorldClim a |
| Bio12 | Annual precipitation | 1970–2000 | 30 arc sec | WorldClim a |
| Bio13 | Precipitation of the wettest month | 1970–2000 | 30 arc sec | WorldClim a |
| Bio14 | Precipitation of the driest month | 1970–2000 | 30 arc sec | WorldClim a |
| Bio15 | Precipitation seasonality | 1970–2000 | 30 arc sec | WorldClim a |
| Bio16 | Precipitation of the wettest quarter | 1970–2000 | 30 arc sec | WorldClim a |
| Bio17 | Precipitation of the driest quarter | 1970–2000 | 30 arc sec | WorldClim a |
| Bio18 | Precipitation of the warmest quarter | 1970–2000 | 30 arc sec | WorldClim a |
| Bio19 | Precipitation of the coldest quarter | 1970–2000 | 30 arc sec | WorldClim a |
| NDVIMAX | Maximum NDVI | 2010 | 250 m | MODIS b |
| NDVIMIN | Minimum NDVI | 2010 | 250 m | MODIS b |
| NDVIMEAN | Average NDVI | 2010 | 250 m | MODIS b |
| Elevation | Elevation above sea level | 2017 | 250 m | STRM c |
| Slope | Slope | 2017 | 250 m | STRM c |
| Aspect | Aspect ratio | 2017 | 250 m | STRM c |
| Human | Human population density | 2010 | 1 km | CAS d |
| Pig | Pig density | 2006 | 1 km | Geo-Wiki e |
a WorldClim Global Climate database version 2, available at: http://worldclim.org/version2; b Moderate Resolution Imaging Spectrometer (MODIS), available at: https://lpdaac.usgs.gov/; c Shuttle Radar Topography Mission (SRTM) 250 m digital elevation data version 4.1, available at: http://srtm.csi.cgiar.org//; d Human population density grid data of China, obtained from the Chinese Academy of Sciences (CAS); e Global Pig density grid data, available at: http://www.livestock.geo-wiki.org.
Figure 1Cx. tritaeniorhynchus existence records. Cx. tritaeniorhynchus existence records in China collected by literature retrieval.
Figure 2Distribution prediction map of Cx. tritaeniorhynchus based on the “Host” model. Prediction of habitat suitability of Cx. tritaeniorhynchus by using layers including human population density and pig density (the “Host” model, n = 14).
Figure 3Distribution prediction map of Cx. tritaeniorhynchus based on the “Without Host” model. Prediction of habitat suitability of Cx. tritaeniorhynchus by using layers excluding human population density and pig density (the “Without Host” model, n = 12).
Model evaluation indicators.
| Model | Variables | Training AUC | Test AUC | Standard Deviation | Threshold | Test Omission Rate | Exposed Area (Million km2) | Exposed Population (Million) |
|---|---|---|---|---|---|---|---|---|
|
| 14 | 0.967 | 0.950 | 0.012 | 0.169 | 0.174 | 1.237 | 670.165 |
|
| 12 | 0.957 | 0.942 | 0.026 | 0.196 | 0.174 | 1.523 | 681.775 |
Figure 4Results of the jackknife test for the “Host” model. A longer blue bar indicates a greater importance of that variable when it was used alone. A shorter green bar indicates a greater reduction in training gain when that variable was omitted.
Figure 5Results of the jackknife test for the “Without Host” model. A longer blue bar indicates a greater importance of that variable when it was used alone. A shorter green bar indicates a greater reduction in training gain when that variable was omitted.
The percent contribution of each variable in two models.
| Variables | Contribution in “Host” Model | Contribution in “Without Host” Model | Rank in “Host” Model | Rank in “Without Host” Model |
|---|---|---|---|---|
| Bio 03 | 1.33 | 0.47 | 7 | 10 |
| Bio 05 | 0.61 | 0.84 | 8 | 8 |
| Bio 11 | 4.53 | 3.56 | 4 | 5 |
| Bio 14 | 10.58 | 32.21 | 2 | 2 |
| Bio 15 | 0.48 | 0.55 | 10 | 9 |
| Bio 18 | 2.83 | 12.85 | 5 | 3 |
| NDVI MAX | 10.31 | 35.28 | 3 | 1 |
| NDVI MEAN | 0.47 | 2.61 | 11 | 6 |
| NDVI MIN | 0.10 | 0.09 | 14 | 12 |
| Elevation | 1.42 | 9.82 | 6 | 4 |
| Slope | 0.17 | 1.39 | 13 | 7 |
| Aspect | 0.57 | 0.33 | 9 | 11 |
| Human density | 66.20 | 1 | ||
| Pig density | 0.41 | 12 |
Figure 6Response curves for representative variables.