Literature DB >> 30132212

Decision Tree Based Classification of Abdominal Aortic Aneurysms Using Geometry Quantification Measures.

Shalin A Parikh1, Raymond Gomez2, Mirunalini Thirugnanasambandam1, Sathyajeeth S Chauhan1, Victor De Oliveira3, Satish C Muluk4, Mark K Eskandari5, Ender A Finol6,7.   

Abstract

Abdominal aortic aneurysm (AAA) is an asymptomatic aortic disease with a survival rate of 20% after rupture. It is a vascular degenerative condition different from occlusive arterial diseases. The size of the aneurysm is the most important determining factor in its clinical management. However, other measures of the AAA geometry that are currently not used clinically may also influence its rupture risk. With this in mind, the objectives of this work are to develop an algorithm to calculate the AAA wall thickness and abdominal aortic diameter at planes orthogonal to the vessel centerline, and to quantify the effect of geometric indices derived from this algorithm on the overall classification accuracy of AAA based on whether they were electively or emergently repaired. Such quantification was performed based on a retrospective review of existing medical records of 150 AAA patients (75 electively repaired and 75 emergently repaired). Using an algorithm implemented within the MATLAB computing environment, 10 diameter- and wall thickness-related indices had a significant difference in their means when calculated relative to the AAA centerline compared to calculating them relative to the medial axis. Of these 10 indices, nine were wall thickness-related while the remaining one was the maximum diameter (Dmax). Dmax calculated with respect to the medial axis is over-estimated for both electively and emergently repaired AAA compared to its counterpart with respect to the centerline. C5.0 decision trees, a machine learning classification algorithm implemented in the R environment, were used to construct a statistical classifier. The decision trees were built by splitting the data into 70% for training and 30% for testing, and the properties of the classifier were estimated based on 1000 random combinations of the 70/30 data split. The ensuing model had average and maximum classification accuracies of 81.0 and 95.6%, respectively, and revealed that the three most significant indices in classifying AAA are, in order of importance: AAA centerline length, L2-norm of the Gaussian curvature, and AAA wall surface area. Therefore, we infer that the aforementioned three geometric indices could be used in a clinical setting to assess the risk of AAA rupture by means of a decision tree classifier. This work provides support for calculating cross-sectional diameters and wall thicknesses relative to the AAA centerline and using size and surface curvature based indices in classification studies of AAA.

Entities:  

Keywords:  Aneurysm; Decision trees; Geometric modeling; Machine learning

Mesh:

Year:  2018        PMID: 30132212      PMCID: PMC6249073          DOI: 10.1007/s10439-018-02116-w

Source DB:  PubMed          Journal:  Ann Biomed Eng        ISSN: 0090-6964            Impact factor:   3.934


  27 in total

1.  Biomechanical rupture risk assessment of abdominal aortic aneurysms: model complexity versus predictability of finite element simulations.

Authors:  T C Gasser; M Auer; F Labruto; J Swedenborg; J Roy
Journal:  Eur J Vasc Endovasc Surg       Date:  2010-05-05       Impact factor: 7.069

2.  Quantitative assessment of abdominal aortic aneurysm geometry.

Authors:  Judy Shum; Giampaolo Martufi; Elena Di Martino; Christopher B Washington; Joseph Grisafi; Satish C Muluk; Ender A Finol
Journal:  Ann Biomed Eng       Date:  2010-10-02       Impact factor: 3.934

3.  Biomechanical properties of ruptured versus electively repaired abdominal aortic aneurysm wall tissue.

Authors:  Elena S Di Martino; Ajay Bohra; Jonathan P Vande Geest; Navyash Gupta; Michel S Makaroun; David A Vorp
Journal:  J Vasc Surg       Date:  2006-03       Impact factor: 4.268

4.  An approach for patient-specific multi-domain vascular mesh generation featuring spatially varying wall thickness modeling.

Authors:  Samarth S Raut; Peng Liu; Ender A Finol
Journal:  J Biomech       Date:  2015-04-16       Impact factor: 2.712

5.  Correlation between transversal and orthogonal maximal diameters of abdominal aortic aneurysms and alternative rupture risk predictors.

Authors:  Kamil Novak; Stanislav Polzer; Tomas Krivka; Robert Vlachovsky; Robert Staffa; Lubos Kubicek; Lukas Lambert; Jiri Bursa
Journal:  Comput Biol Med       Date:  2017-03-06       Impact factor: 4.589

6.  Local wall thickness in finite element models improves prediction of abdominal aortic aneurysm growth.

Authors:  Eric K Shang; Derek P Nathan; Edward Y Woo; Ronald M Fairman; Grace J Wang; Robert C Gorman; Joseph H Gorman; Benjamin M Jackson
Journal:  J Vasc Surg       Date:  2013-10-03       Impact factor: 4.268

7.  Three-dimensional geometrical characterization of abdominal aortic aneurysms: image-based wall thickness distribution.

Authors:  Giampaolo Martufi; Elena S Di Martino; Cristina H Amon; Satish C Muluk; Ender A Finol
Journal:  J Biomech Eng       Date:  2009-06       Impact factor: 2.097

8.  Abdominal aortic aneurysm diameter: a comparison of ultrasound measurements with those from standard and three-dimensional computed tomography reconstruction.

Authors:  Brian J Manning; Thorarinn Kristmundsson; Björn Sonesson; Timothy Resch
Journal:  J Vasc Surg       Date:  2009-08       Impact factor: 4.268

9.  Stress distributions in vascular aneurysms: factors affecting risk of aneurysm rupture.

Authors:  W R Mower; L J Baraff; J Sneyd
Journal:  J Surg Res       Date:  1993-08       Impact factor: 2.192

10.  Surface curvature as a classifier of abdominal aortic aneurysms: a comparative analysis.

Authors:  Kibaek Lee; Junjun Zhu; Judy Shum; Yongjie Zhang; Satish C Muluk; Ankur Chandra; Mark K Eskandari; Ender A Finol
Journal:  Ann Biomed Eng       Date:  2012-11-22       Impact factor: 3.934

View more
  9 in total

1.  A Comparative Classification Analysis of Abdominal Aortic Aneurysms by Machine Learning Algorithms.

Authors:  Balaji Rengarajan; Wei Wu; Crystal Wiedner; Daijin Ko; Satish C Muluk; Mark K Eskandari; Prahlad G Menon; Ender A Finol
Journal:  Ann Biomed Eng       Date:  2020-01-24       Impact factor: 3.934

2.  Predicting abdominal aortic aneurysm growth using patient-oriented growth models with two-step Bayesian inference.

Authors:  Emrah Akkoyun; Sebastian T Kwon; Aybar C Acar; Whal Lee; Seungik Baek
Journal:  Comput Biol Med       Date:  2020-01-13       Impact factor: 4.589

3.  Development of Machine-Learning Model to Predict COVID-19 Mortality: Application of Ensemble Model and Regarding Feature Impacts.

Authors:  Seung-Min Baik; Miae Lee; Kyung-Sook Hong; Dong-Jin Park
Journal:  Diagnostics (Basel)       Date:  2022-06-14

4.  Use of Machine Learning for Prediction of Patient Risk of Postoperative Complications After Liver, Pancreatic, and Colorectal Surgery.

Authors:  Katiuscha Merath; J Madison Hyer; Rittal Mehta; Ayesha Farooq; Fabio Bagante; Kota Sahara; Diamantis I Tsilimigras; Eliza Beal; Anghela Z Paredes; Lu Wu; Aslam Ejaz; Timothy M Pawlik
Journal:  J Gastrointest Surg       Date:  2019-08-05       Impact factor: 3.452

5.  High-frequency murine ultrasound provides enhanced metrics of BAPN-induced AAA growth.

Authors:  Daniel J Romary; Alycia G Berman; Craig J Goergen
Journal:  Am J Physiol Heart Circ Physiol       Date:  2019-09-27       Impact factor: 4.733

6.  The Association Between Curvature and Rupture in a Murine Model of Abdominal Aortic Aneurysm and Dissection.

Authors:  B A Lane; M J Uline; X Wang; T Shazly; N R Vyavahare; J F Eberth
Journal:  Exp Mech       Date:  2020-09-15       Impact factor: 2.808

7.  Discovering Panel of Autoantibodies for Early Detection of Lung Cancer Based on Focused Protein Array.

Authors:  Di Jiang; Xue Zhang; Man Liu; Yulin Wang; Tingting Wang; Lu Pei; Peng Wang; Hua Ye; Jianxiang Shi; Chunhua Song; Kaijuan Wang; Xiao Wang; Liping Dai; Jianying Zhang
Journal:  Front Immunol       Date:  2021-04-23       Impact factor: 7.561

8.  Development of machine learning model for diagnostic disease prediction based on laboratory tests.

Authors:  Dong Jin Park; Min Woo Park; Homin Lee; Young-Jin Kim; Yeongsic Kim; Young Hoon Park
Journal:  Sci Rep       Date:  2021-04-07       Impact factor: 4.379

9.  Defining a master curve of abdominal aortic aneurysm growth and its potential utility of clinical management.

Authors:  Emrah Akkoyun; Hamidreza Gharahi; Sebastian T Kwon; Byron A Zambrano; Akshay Rao; Aybar C Acar; Whal Lee; Seungik Baek
Journal:  Comput Methods Programs Biomed       Date:  2021-06-25       Impact factor: 7.027

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.