Literature DB >> 30123669

Phylogenetic position and taxonomy of Kusaghiporia usambarensis gen. et sp. nov. (Polyporales).

Juma Mahmud Hussein1,2, Donatha Damian Tibuhwa2, Sanja Tibell1.   

Abstract

A large polyporoid mushroom from the West Usambara Mountains in North-eastern Tanzania produces dark brown, up to 60-cm large fruiting bodies that at maturity may weigh more than 10 kg. It has a high rate of mycelial growth and regeneration and was found growing on both dry and green leaves of shrubs; attached to the base of living trees, and it was also observed to degrade dead snakes and insects accidentally coming into contact with it. Phylogenetic analyses based on individual and concatenated data sets of nrLSU, nrSSU and the RPB2 and TEF1 genes showed it, together with Laetiporus, Phaeolus, Pycnoporellus and Wolfiporia, to form a monophyletic group in Polyporales. Based on morphological features and molecular data, it is described as Kusaghiporia usambarensis.

Entities:  

Keywords:  Kusaghiporia; Tanzania; Usambara; molecular phylogeny; polyporales; taxonomy

Year:  2018        PMID: 30123669      PMCID: PMC6059158          DOI: 10.1080/21501203.2018.1461142

Source DB:  PubMed          Journal:  Mycology        ISSN: 2150-1203


Introduction

Polyporales is an order of fungi in Basidiomycota containing more than 1800 species in 216 genera and 13 families (Kirk et al. 2008). However, Justo et al. (2017) recognised 37 families in Polyporales. Seven clades have been recognised in Polyporales: the “antrodia”; “core polyporoid”; “residual polyporoid”; “phlebioid”; “tyromyces”; “gelatoporia” and “fragiliporia” clades (Binder et al. 2013; Zhao et al. 2015). The “antrodia clade” was first identified by Hibbett and Donoghue (2001) and currently more than 26 genera are recognised in this clade (Ortiz-Santana et al. 2013). Members in the “antrodia clade” are of economic importance as a source of food, and also of pharmaceutical and biotechnological products. However, it also contains species that are plant pathogens detrimental to forests and forest plantations (Dai et al. 2007; Banik et al. 2010). The “antodia clade” is morphologically diverse and includes species that have resupinate, stipitate or pileatebasidiomata that are either annual or perennial; the hyphal system is monomitic, dimitic or trimitic; the basidiospores are hyaline thin- to thick-walled, subglobose to cylindricaland they cause brown rots (Ryvarden and Melo 2014). The “antrodia clade” has been widely studied and additional genera have been suggested to belong there. Recent taxonomic and phylogenetic studies, including that of Lindner and Banik (2008), have presented molecular phylogenies of the clade. In a study of Laetiporus and other polypores, Banik et al. (2010) inferred relationships among North American and Japanese Laetiporus isolates; Ortiz-Santana et al. (2013) presented a phylogenetic overview of the “antrodia clade” and Binder et al. (2013) used genomic data and a six-gene data set for evaluating phylogenetic relationships in Polyporales. Further studies include those of Han et al. (2014) in which two new species of Fomitopsis from China were described, and Zhao et al. (2015) used a multi-gene dataset to support the recognition of Fragiliporiaceae, a new family of Polyporales. Han et al. (2016) offered a study of the phylogeny of the brown-rot fungi, including Fomitopsis and related genera, while Justo et al. (2017) revised the phylogeny of Polyporales at family-level. A mushroom locally known as “Kusaghizi” has a long tradition of being used as food by local communities in the Usambara mountains as first reported by Powell et al. (2013). In a study by Juma et al. (2016), which assessed antioxidant activities of saprobic mushrooms from Tanzania, “Kusaghizi” was included, but neither the study by Powell et al. nor that of Juma et al. reported a scientific name for “Kusaghizi”. Here we aim to describe this species and infer its phylogenetic position.

Material and methods

Material

Material of the fungus locally named “Kusaghizi” was collected during the rainy seasons in February 2016 and March 2017 close to the villages Bungu, Buti and Makuri in the Usambara Mountains. These villages are located in the Korogwe District of the Tanga region, Tanzania. The west Usambara Mountains are part of the “Eastern Arc” of ranges in eastern Tanzania, from the Taita Hills in Kenya to the Udzungwa Mountains in southern Tanzania. The samples were examined in a fresh condition for macro-morphological features including colour changes upon cut, bruising and exposure to air. A fruit body was divided into two parts; one was sun dried for 5 days while the remaining part was stored in a freezer at −20°C for further investigations.

Morphological characterisation

Basidioma colours of the holotype were indicated according to Kornerup and Wanschern (1967). Photographs of the fruit body were taken before and after removing it from its substrate. Microscopic characterisation was done from preparations of a rehydrated specimen sectioned with a freezing microtome and stained with Lactic Blue, or treated with 10% KOH and Melzer’s reagent. A total of 40 mature basidiospores were randomly selected and measured. Statistical averages were used to estimate the observed features as follows: AL = mean spore length (arithmetic mean of the length of spores); AW = mean spore width (arithmetic mean of the width of spores); Q = AL/AW ratio; n (a/b) = number of spores (a) measured from given number (b) of specimen. Melzer’s reagent was used where IKI+ = Melzer’s reagent positive; IKI− = both inamyloid and indextrinoid.

DNA extraction, amplification and sequencing

Total genomic DNA was extracted from both fresh and dried material and kept at −20°C following the protocol of the plant Genomic DNA extraction kit (E.Z.N.A. Fungal DNA Mini Kit Protocols). Diluted samples (10–1) of DNA were used for PCR amplification of the nrLSU, nrSSU, RPB2 and TEF1. Primers LR0R, LR7, LR5 were used for nrLSU (Vilgalys and Hester 1990), and PNS1 and NS41 for nrSSU (Hibbett 1996). PCR conditions for nrLSU and nrSSU were: initial denaturation for 4 min at 95°C, followed by 35 cycles of 1 min at 94°C, 1 min at 54°C, 45 s at 72°C, and a final elongation for 5 min at 72°C. The RPB2 region was amplified using degenerated primers fRPB2-5f and RPB2-7.1R (Matheny 2005). For amplification of TEF1the EF1-983Fand EF1-1567R primers were used (Rehner and Buckley 2005). Touchdown PCR was used with an initial annealing temperature of 66°C following the protocol of Rehner and Buckley (2005). The PCR products were visualised by electrophoresis on 1.5% agarose gels. Products were purified using Illustra™ ExoStar buffer diluted 10×, following the manufacturer’s protocol. Sequencing was carried out by Macrogen.

Data analyses

Sequences from GenBank were selected based on their quality and with an intention of wide coverage of Polyporales and the “antrodia clade” as in Zhao et al. (2015) and Han et al. (2016) respectively. The sequences produced in this study were aligned along with those downloaded from GenBank (Table 1) using MAFFT v. 7 (http://mafft.cbrc.jp/alignment/server/) and manually adjusted using AliView (Larsson 2014). Ambiguously aligned regions were excluded from the analyses. For RPB2 and TEF1 only coding parts of the sequences were used for the analyses. The concatenated data matrix of Polyporalesand the “antrodia clade” contained 4940 and 3760 unambiguously aligned sites respectively. All alignments were based on the nucleotide sequences with each gene analysed separately.
Table 1.

Species, collection and GenBank accession number of sequences used in this study. New sequences in bold.

GenBank accession
Species nameCollection numbernrLSUnrSSUtef1rpb2References
Albatrellus higanensisAFTOL-ID 774AY684166AY707091DQ059049AY780935Matheny et al. (2007)
Amyloporia carbonicaCui 12212KR605755KR605917KR610745Han et al. (2016)
A. xanthaCui 11677KR605757KR605919KR610747KR610837Han et al. (2016)
Antrodia albidaFP 105979EU232272AY336777DQ491387Kim et al. (2007)
A. heteromorphaDai 12755KP715322KR605908KP715336KR610828Chen and Cui (2016)
A. macraEriksson 1967R605749KR605909KR610739Han et al. (2016)
A. serialisCui 10519KP715323KR605911KP715337KR610830Han et al. (2016)
A. serpensDai 7465KR605752KR605913KR610742KR610832Han et al. (2016)
A. tanakaeCui 9743KR605753KR605914KR610743KR610833Han et al. (2016)
A. variiformisCBS 309.82AY515344JF972578DQ491391Kim et al. (2007)
Bjerkandera adustaHHB-12826-SpMF115840DQ060085KP134913Floudas and Hibbett (2015)
Buglossoporus eucalipticolaDai 13660KR605747KR605906KR610736KR610825Han et al. (2016)
B. quercinusJV 1406/1KR605740KR605899KR610730KR610820Han et al. (2016)
Climacodon septentrionalisAFTOL-ID 767AY684165AY705964AY885151AY780941 
Coriolopsis polyzonaCui 11040KR605767KR605932KR610760KR610849Han et al. (2016)
Crustoderma flavescensHHB-9359-SpKC585150Ortiz-Santana et al. (2013)
C. longicystidia AY219388 
C. resinosumL-10631-SpKC585155Ortiz-Santana et al. (2013)
Daedalea africanaO 15372KP171216KR605871KR610704KR610795Han et al. (2015)
D. allantoideaDai 13612AKR605734KR605892KR610723KR610813Han et al. (2016)
D. radiataCui 8575KP171233KR605888KR610720KR610811Han et al. (2015)
D. quercinaDai 12152KP171229KR605886KR610717KR610809Han et al. (2015)
Fibroporia albicansDai 10595KR605759Chen et al. (2016)
F. radiculosaCui 11404KR605760KR605922KR610750KR610840Chen et al. (2016)
Fomitopsis durescensO 10796KF937294KR605834KR610669KR610766Han et al. (2014)
F. ibericusO 10810KR605710KR605842KR610676KR610771Han et al. (2016)
F. palustrisCui 7597KP171236KR605854KR610687KR610778Han et al. (2015)
F. pinicolaCui 10312KR605720KR605856KR610689KR610780Han et al. (2016)
Fragifomes niveomarginataCui 10108KR605717KR605851KR610684KR610776Han et al. (2016)
Fragiliporia fragilisDai 13559
KJ734265KJ790246KJ790249Zhao et al. (2015)
F. fragilisiDai 13080
KJ734264KJ790245KJ790248Zhao et al. (2015)
Ganoderma lucidumBEOFB434X78776KY464926KX371599KX371601 
G. tsugaeAFTOL-ID 771AY684163AY705969DQ059048DQ408116Matheny et al. (2007)
Heterobasidion annosum06129/6KJ583225U59072AB472644KJ651728Chen et al. (2016)
Junghuhnia nitidaKHL 11903EU118638AF082685JN710721KP134964Larsson (2007)
Kusaghiporia usambarensisJMH 01J. Hussein 01/16MH010044MH010046MH048871MH048870This study
K. usambarensisJMH 02J. Hussein 01/17MH010045MH048869This study
Laetiporus cincinnatusJV 0709/168JKF951305KX354517KY886787KY886801Song et al. (2014)
L. persicinusHHB9564EU402513Lindner and Banik (2008)
L. persicinusRLG14725EU402512Lindner and Banik (2008)
L. sulphureusDai 12154KF951302KR605924KR610752KR610841Song et al. (2014)
Laricifomes officinalisJV 0309/49-JKR605764KR605929KR610757KR610846Han et al. (2016)
Phaeolus schweinitzii AFTOL 702AFTOL-ID 702AY629319AY705961DQ028602DQ408119Matheny et al. (2007)
P. schweinitzii Dai 8025Dai 8025KC585197KX354553KX354686LN714690Song and Cui (2017)
Phanerochaete chrysosporiumBKM-F-1767GQ470643KJ606692HQ188380KP134954Wu et al. (2010)
Phlebia radiataAFTOL-ID 484AF287885AY946267AY885156AY218502Hibbett et al. (2000)
Piptoporellus hainanensisDai 13714KR605745KR605904KR610735KR610824Han et al. (2016)
P. soloniensisLY BR 5463KR605744KR605903KR610734KR610823Han et al. (2016)
Polyporus arculariusDSH92132KP283522KX549013AB368139Seelan et al. (2015)
P. squamosusAFTOL-ID 704AF135181AY705963DQ028601DQ408120Matheny et al. (2007)
Polyporales sp. Kusaghizi IJV 01IJV40-1KM593894 
Polyporales sp. Kusaghizi IJV 02IJV40-2KM593895 
Postia duplicataDai 13411KJ684976KR605928KR610844Ll and Bk (2014)
Pycnoporellus alboluteusHHB-17598-SpKC585216Ortiz-Santana et al. (2013)
P. fulgensCA-20KC585218 Ortiz-Santana et al. (2013)
Pycnoporus sp.ZW02.30AY684160GU182936DQ028600DQ408121Matheny et al. (2007)
Steccherinum ochraceum EU118670JX109893JN710738Larsson (2007)
Stereum hirsutumFP-91666AY039330AF026588XM007298185AY218520Wu et al. (2001)
Trametes suaveolensCui 11586KR605766KR605931KR610759KR610848Han et al. (2016)
Trametes versicolorDai10998KC848354KR261697JN164878DQ408125Justo and Hibbett (2011)
Ungulidaedalea fragilisCui 10919KF937290KR605840KR610674KR610770Han et al. (2014)
Wolfiporia cocos EF 39759918176KC585233Ortiz-Santana et al. (2013)
W. cocos voucher CBK 1CBK-1KX354689KX354690KX354688KX354685Song and Cui (2017)
W. cartilaginea13121KC585405Ortiz-Santana et al. (2013)
W. dilatohyphaFP-72162-RKC585235Ortiz-Santana et al. (2013)
Species, collection and GenBank accession number of sequences used in this study. New sequences in bold. Single-gene analyses were performed to detect significant conflicts among datasets. A conflict among single-locus datasets (nrLSU, nrSSU, RPB1, TEF1) was considered significant if a well-supported monophyletic group, for example posterior probability (PP) ≥ 0.95, was found to be well supported as non-monophyletic when different loci were used. No significant incongruence among the single-gene trees was detected (Supplementary Figures S1A, S1B S1C and S1D), hence the four matrices were concatenated. Further analyses were carried out after concatenation using Sequence Matrix (Vaidya et al. 2011). The best-fit model of DNA evolution for the analyses, for both individual codon positions and genes, was obtained using the Akaike Information Criterion as implemented in MrModeltest 2.3 (Nylander 2004). For the Polyporales dataset the GTR+I + G model was employed across sites for nrLSU, nrSSU, and for the 1st and 2nd codon for RPB2. For the 1st and the 2nd codon for TEF1 the model F81 + I + G was applied, while GTR + G was implemented for both the 3rd codon of RPB2 and TEF1. For the “antrodia clade” dataset the GTR+I + G model was employed across sites for nrLSU, nrSSU, for all three codons for RPB2, and the 2nd codon for TEF1. For the 1st codon for TEF1 the F81 + I model was applied while the HKY + I + G model was implemented for the 3rd codon for TEF1. Bayesian Inference was conducted with MrBayes 3.2.6, and branch support was estimated by PP (Ronquist and Huelsenbeck 2003). Four Markov chains were run for 2 runs from random starting trees for 10 million generations, trees were sampled every 100 generations and 25% were discarded as burn-in. Maximum likelihood estimates were carried out by RAxML v.8.2.10 using the GTR +G + I model of site substitution (Stamatakis 2014). The branch support was obtained by maximum likelihood bootstrapping (MLbs) of 1000 replicates (Hillis and Bull 1993). Bayesian PPs ≥ 0.95 (Alfaro et al. 2003), and MLb ≥ 70% were considered to be significant. Sequence alignments and phylogenetic trees were deposited in TreeBase, submission ID: (http://purl.org/phylo/treebase/phylows/study/TB2:S223838).

Results

Phylogenetic analyses

Analyses were based on a total of 209 sequences representing 201 species of Polyporales, with two russuloid species as out-group. The phylogeny of the Polyporales and the position of the “Kusaghizi” was inferred from four datasets: 36 nrLSU sequences, 25 nrSSU sequences, 26 RPB2 sequences and 22 TEF1 sequences. The Polyporales concatenated dataset (Figure 1) contained 100 sequences of 34 nrLSU, 21 nrSSU, 23 RPB2 and 22 TEF1. Further analyses included members of the “antrodia clade” (Figure 2) containing 145 concatenated sequences of 46 nrLSU, 33 nrSSU, 32 RPB2 and 35 TEF1. Maximum likelihood and Bayesian analyses of these datasets were undertaken, first separately and then also of the concatenated dataset. The analysis of the concatenated Polyporales dataset retrieved a phylogeny with five distinct clades (Figure 1) in addition to Stereum hirsutum and Heterobasidion annosum, as outgroup. Clade annotations follow Zhao et al. (2015). Kusaghiporia usambarensis was found to belong in the “antrodia clade”. The annotation of the concatenated phylogeny of the “antrodia clade” (Figure 2) follows Han et al. (2016).
Figure 1.

Phylogenetic relationships among Kusaghiporia usambarensis and allied taxa in Polyporales, based on Bayesian and ML analyses of concatenated nrLSU, nrSSU, RPB1 and TEF1 datasets. The tree was rooted using two species from Russulales (Heterobasidion annosum and Stereum hirsutum). The two support values associated with each internal branch correspond to PPs and MLbs proportions, respectively. Branches in bold indicate a support of PP ≥ 0.95 and MLbs ≥ 70%. An asterisk on a bold branch indicates that this node has a support of PP = 1.0 and MLbs = 100. The branch with double-slash is shortened. Clade names follow Zhao et al. (2015).

Figure 2.

Phylogenetic relationships among Kusaghiporia usambarensis and allied taxa in the “antrodia clade”, based on Bayesian and ML analyses of concatenated nrLSU, nrSSU, RPB1 and TEF1 datasets. The tree was rooted using two species from the “core polyporoid clade” (Coriolopsis polyzona and Trametes suaveolens). The two support values associated with each internal branch correspond to PPs and MLbs proportions, respectively. Branches in bold indicate a support of PP ≥ 0.95 and MLbs ≥ 70%. An asterisk on a bold branch indicates that this node has a support of PP = 1.0 and MLbs = 100. The branch with double-slash is shortened. Clade names follow Han et al. (2016).

Phylogenetic relationships among Kusaghiporia usambarensis and allied taxa in Polyporales, based on Bayesian and ML analyses of concatenated nrLSU, nrSSU, RPB1 and TEF1 datasets. The tree was rooted using two species from Russulales (Heterobasidion annosum and Stereum hirsutum). The two support values associated with each internal branch correspond to PPs and MLbs proportions, respectively. Branches in bold indicate a support of PP ≥ 0.95 and MLbs ≥ 70%. An asterisk on a bold branch indicates that this node has a support of PP = 1.0 and MLbs = 100. The branch with double-slash is shortened. Clade names follow Zhao et al. (2015). Phylogenetic relationships among Kusaghiporia usambarensis and allied taxa in the “antrodia clade”, based on Bayesian and ML analyses of concatenated nrLSU, nrSSU, RPB1 and TEF1 datasets. The tree was rooted using two species from the “core polyporoid clade” (Coriolopsis polyzona and Trametes suaveolens). The two support values associated with each internal branch correspond to PPs and MLbs proportions, respectively. Branches in bold indicate a support of PP ≥ 0.95 and MLbs ≥ 70%. An asterisk on a bold branch indicates that this node has a support of PP = 1.0 and MLbs = 100. The branch with double-slash is shortened. Clade names follow Han et al. (2016).

Taxonomy

Kusaghiporia usambarensis Hussein J., Tibell S. & Tibuhwa, gen. et sp. nov. MycoBank no.: MB824538 [Figures 3, 4, 5.]
Figure 3.

(a) Basidiocarp of Kusaghiziporia usambarensis(holotype). (b) Vertical section of basidiocarp. (c) Lower part of basidiocarp. (d) Bruise reaction, the creamy pores (5A2) turned brown (5D6).

Figure 4.

Microscopic structures of Kusaghiziporia usambarensis (holotype). (a) Skeletal hyphae (sk) with Y-shaped branches; gloeplerous hyphae (gl). (b) Septate generative hyphae (gen). (c) Basidia. (d) Basidia with spores attached to sterigmata. (e) Globular to subglobular basidiospores.

Figure 5.

(a) Picture of basidia with spores attached to sterigmata. (b) Globular to subglobular basidiospores.

(a) Basidiocarp of Kusaghiziporia usambarensis(holotype). (b) Vertical section of basidiocarp. (c) Lower part of basidiocarp. (d) Bruise reaction, the creamy pores (5A2) turned brown (5D6). Microscopic structures of Kusaghiziporia usambarensis (holotype). (a) Skeletal hyphae (sk) with Y-shaped branches; gloeplerous hyphae (gl). (b) Septate generative hyphae (gen). (c) Basidia. (d) Basidia with spores attached to sterigmata. (e) Globular to subglobular basidiospores. (a) Picture of basidia with spores attached to sterigmata. (b) Globular to subglobular basidiospores. Basidioma annual, spathulate, viscid when young, at maturity saucer-shaped, bumpy, and with a spongy surface. Upper surface mottled dark brown with creamy patches. Hyphal system dimitic, with generative and skeletal hyphae. Gloeplerous hyphae present.

Holotype TANZANIA

Korogwe district, Tanga, Bungu, 18 February 2016, J. Hussein 01/16 (UPS); GenBank MH010044, MH010046, MH048871, MH048870.

Additional material examined

TANZANIA, Korogwe district, Tanga, Buti, 21 March 2017, J. Hussein 01/17 (UPS); GenBank MH010045, MH048869; Tanga, Makuri, 21 March 2017, J. Hussein 02/17 (UPS).

Etymology

Kusaghiporia refers to the sambaa name of the mushroom “Kusaghizi”, which means the collector or accumulator, and –poria (Lat.): with pores; usambarensis (Lat.): referring to the Usambara mountain range.

Fruitbody

Basidioma annual, spathulate, when young viscid, when mature depressed saucer-shaped, up to 60 cm in diameter with an uneven, velvety surface, surface dark brown at the centre (5E8), eroded (wrinkled), dark brown (5E8) to creamy (5A2); basidioma margin fleshy, up to 6-cm thick, dark brown (5E6) with pale brown (5C3) stripes. Stipe central, c. 12-cm high, c. 10 cm in diameter at the base, clavate, with creamy small dots (5A2), tough/woody, dark brown (5F8) in the inner part, without ring. The pores are creamy (5A2), turning brown (5D6) upon bruising. Cap in section dark brown (5E8) with creamy stripes (5A2), not changing upon exposure to air. Spore print whitish to creamy (5A2).

Hyphal structure

Hyphal system dimitic; generative hyphae with simple septa, hyaline, thin-walled 2.7–10.9 µm in diam (Figure 4(b)); skeletal hyphae hyaline, thick-walled, with Y-shaped branches 2.7–6.3 µm in diam (Figure 4(a)); gloeplerous hyphae present 3.6–11.8 µm in diam (Figure 4(a)).

Basidia and basidiospores

Basidia thin-walled, hyaline, tetrasterigmatic, 2.7–5.4 µm in diam (Figures 4(c, d) and 5(a)). Basidiospores hyaline, globose to subglobose, thin-walled, smooth, IKI-, 2.7–8.1 × 2.7–7.2 µm, AL = 5.9 µm, AW = 5.7 µm, Q = 1.04 (n = 40/1) (Figures 4(d, e) and 5(b)).

Rot type

Brown rot.

Host

Found growing at the base of the trees Maesopsis eminii and Ficus natalensis.

Discussion

In earlier studies (Binder et al. 2013; Zhao et al. 2015), seven clades were found in Polyporales: the “core polyporoid clade”; the “residual polyporoid clade”; the “antrodia clade”; the “gelatoporia clade”; the “phlebioid clade”; the “tyromyces clade” and the “fragiliporia clade”. Justo et al. (2017) recognised six clades, excluding the “fragiliporia clade” reported by Zhao et al. (2015). We found Kusaghiporia to be nested within the “antrodia clade” in all analyses; concatenated dataset (Figure 1), and nrLSU, nrSSU, TEF1, RPB2 (Fig S1A, S1B, S1C; S1D). Analyses of Kusaghiporia and related taxa in the “antrodia clade” grouped Kusaghiporia with Laetiporus and Wolfiporia, a clade receiving strong support (Figure 2; 1 PP, 91% MLbs). Despite the strong support of Laetiporaceae Jülich (Figure 2) K. usambarensis, L. persicinus, W. cocos, Phaoelus, and Crustoderma together with Pycnoporellus displayed long branches indicating a high genetic divergence. A high genetic divergence of L. persicinus has previously been reported (Binder et al. 2013; Ortiz-Santana et al. 2013; Han et al. 2016; Justo et al. 2017). Lindner and Banik (2008) suggested placing L. persicinus in a separate genus due to its genetic remoteness as compared to other species of Laetiporus. Justo et al. (2017) suggested further studies to be needed for the delimitation of Wolfiporia and Laetiporus. However, a detailed discussion of L. persicinus and W. cocos is beyond the scope of this study. Kusaghiporia usambarensis is morphologically similar to Crustoderma, Pycnoporellus, Phaeolus, Wolfiporia and Laetiporus, insofar that they all have hyphae with simple septa, produce annual polyporoid fruiting bodies with hyaline spores and cause brown rots (Lindner and Banik 2008). Crustoderma (Eriksson and Ryvarden 1975) differs from K. usambarensis in having resupinate basidio carps and a monomitic hyphal system. Pycnoporellus (Ryvarden and Melo 2014) differs from K. usambarensis in having yellow to orange basidiocarps and a monomitic hyphal system. Phaeolus (Lindner and Banik 2008) differs from K. usambarensis in having a monomitic hyphal system and producing hymenial cystidia. Wolfiporia and Laetiporus, like K. usambarensis, have dimitic hyphal systems. Wolfiporia, however, has resupinate basidiocarps and oblong-ellipsoid basidiospores (Zmitrovich et al. 2006). With the exception of L. persicinus, other Laetiporus species produce brightly coloured basidiocarps (Lindner and Banik 2008). Kusaghiporia usambarensis is different from L. persicinus in basidioma morphology (up to 60 cm) and the basiodiospores being globose to subglobose, while broadly ovoid in L. persicinus. The BLAST results from GeneBank (NCBI, from 2017-10-16), using blastn with the program “discontiguous megablast” (for cross-species comparison, searching with coding sequences) with Kusaghiporia sequences, showed a highest sequence similarity for all four genes with Laetiporus sulphureus. Based on RPB2 and TEF1 they were: Query cover 99% and Ident. 87%, and Query cover 99%, Ident. 84% respectively. For nrSSU the highest similarity has a Query cover of 91% and Ident. 87%; while for nrLSU the Query cover was 100% and the Ident. 86%. Among the five top scores “Polyporales sp. Kusaghizi”, voucher IJV40-2 was found: Query cover only 60% and Ident. 100%. In our opinion the genetic isolation of K. usambarensis as compared to Laetiporus justifies the proposal of a new genus to accommodate the species investigated. The monophyly and strong support of the clade containing K. usambarensis, Laetiporus, Wolfiporia, Crustoderma, Pycnoporellus, and Phaeolus as shown in our phylogeny (Figure 2), also justifies the incorporation of K. usambarensis in Laetiporaceae.

Conclusion

The new genus Kusaghiporia was described based on morphological characters and phylogenetic analyses based on concatenated sequence data from four genes. Kusaghiporia produces large fruit bodies. Together with Laetiporus, Pycnoporellus, Phaeolus, and Wolfiporia it formed a strongly supported clade (Figure 1) belonging in Laetiporaceae, which is nested in the “antrodia clade”. Kusaghiporia is a resource in the local communities of the Usambaras, where it is collected and eaten.
  24 in total

1.  Analysis of character correlations among wood decay mechanisms, mating systems, and substrate ranges in homobasidiomycetes.

Authors:  D S Hibbett; M J Donoghue
Journal:  Syst Biol       Date:  2001-04       Impact factor: 15.683

2.  MrBayes 3: Bayesian phylogenetic inference under mixed models.

Authors:  Fredrik Ronquist; John P Huelsenbeck
Journal:  Bioinformatics       Date:  2003-08-12       Impact factor: 6.937

3.  Phylogenetic relationships and morphological evolution in Lentinus, Polyporellus and Neofavolus, emphasizing southeastern Asian taxa.

Authors:  Jaya Seelan Sathiya Seelan; Alfredo Justo; Laszlo G Nagy; Edward A Grand; Scott A Redhead; David Hibbett
Journal:  Mycologia       Date:  2015-02-06       Impact factor: 2.696

4.  Re-thinking the classification of corticioid fungi.

Authors:  Karl-Henrik Larsson
Journal:  Mycol Res       Date:  2007-08-16

5.  Morphological and molecular evidence for two new species of Laetiporus (Basidiomycota, Polyporales) from southwestern China.

Authors:  Jie Song; Yuanyuan Chen; Baokai Cui; Honggao Liu; Yuanzhong Wang
Journal:  Mycologia       Date:  2014-07-01       Impact factor: 2.696

6.  A Beauveria phylogeny inferred from nuclear ITS and EF1-alpha sequences: evidence for cryptic diversification and links to Cordyceps teleomorphs.

Authors:  Stephen A Rehner; Ellen Buckley
Journal:  Mycologia       Date:  2005 Jan-Feb       Impact factor: 2.696

7.  Bayes or bootstrap? A simulation study comparing the performance of Bayesian Markov chain Monte Carlo sampling and bootstrapping in assessing phylogenetic confidence.

Authors:  Michael E Alfaro; Stefan Zoller; François Lutzoni
Journal:  Mol Biol Evol       Date:  2003-02       Impact factor: 16.240

8.  Revisiting the taxonomy of Phanerochaete (Polyporales, Basidiomycota) using a four gene dataset and extensive ITS sampling.

Authors:  Dimitrios Floudas; David S Hibbett
Journal:  Fungal Biol       Date:  2015-04-24

9.  Fomitopsis incarnatus sp. nov. based on generic evaluation of Fomitopsis and Rhodofomes.

Authors:  Kyung Mo Kim; Jin Sung Lee; Hack Sung Jung
Journal:  Mycologia       Date:  2007 Nov-Dec       Impact factor: 2.696

10.  Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species.

Authors:  R Vilgalys; M Hester
Journal:  J Bacteriol       Date:  1990-08       Impact factor: 3.490

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