Literature DB >> 30096346

The P Granules of C. elegans: A Genetic Model for the Study of RNA-Protein Condensates.

Geraldine Seydoux1.   

Abstract

P granules are RNA/protein condensates in the germline of Caenorhabditis elegans. Genetic analyses have begun to identify the proteins that regulate P granule assembly in the cytoplasm of zygotes. Among them, the RGG-domain protein PGL-3, the intrinsically disordered protein MEG-3, and the RNA helicase LAF-1 all bind and phase separate with RNA in vitro. We discuss how RNA-induced phase separation, competition with other RNA-binding proteins, and reversible phosphorylation contribute to the asymmetric localization of P granules in the cytoplasm of newly fertilized embryos. P granules contain RNA silencing complexes that monitor the germline transcriptome and may provide an RNA memory of germline gene expression across generations.
Copyright © 2018. Published by Elsevier Ltd.

Entities:  

Keywords:  C. elegans; Germline condensates; P granules; RNA granules

Mesh:

Substances:

Year:  2018        PMID: 30096346      PMCID: PMC6779309          DOI: 10.1016/j.jmb.2018.08.007

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  62 in total

1.  Cytoplasmic partitioning of P granule components is not required to specify the germline in C. elegans.

Authors:  Christopher M Gallo; Jennifer T Wang; Fumio Motegi; Geraldine Seydoux
Journal:  Science       Date:  2010-12-02       Impact factor: 47.728

2.  Segregation of germline granules in early embryos of Caenorhabditis elegans: an electron microscopic analysis.

Authors:  N Wolf; J Priess; D Hirsh
Journal:  J Embryol Exp Morphol       Date:  1983-02

3.  PGL germ granule assembly protein is a base-specific, single-stranded RNase.

Authors:  Scott T Aoki; Aaron M Kershner; Craig A Bingman; Marvin Wickens; Judith Kimble
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-19       Impact factor: 11.205

4.  Multiple potential germ-line helicases are components of the germ-line-specific P granules of Caenorhabditis elegans.

Authors:  M E Gruidl; P A Smith; K A Kuznicki; J S McCrone; J Kirchner; D L Roussell; S Strome; K L Bennett
Journal:  Proc Natl Acad Sci U S A       Date:  1996-11-26       Impact factor: 11.205

5.  Processing bodies and germ granules are distinct RNA granules that interact in C. elegans embryos.

Authors:  Christopher M Gallo; Edwin Munro; Dominique Rasoloson; Christopher Merritt; Geraldine Seydoux
Journal:  Dev Biol       Date:  2008-07-16       Impact factor: 3.582

6.  Segregation of germ granules in living Caenorhabditis elegans embryos: cell-type-specific mechanisms for cytoplasmic localisation.

Authors:  S N Hird; J E Paulsen; S Strome
Journal:  Development       Date:  1996-04       Impact factor: 6.868

7.  P granules extend the nuclear pore complex environment in the C. elegans germ line.

Authors:  Dustin L Updike; Stephanie J Hachey; Jeremy Kreher; Susan Strome
Journal:  J Cell Biol       Date:  2011-03-14       Impact factor: 10.539

8.  RNA self-assembly contributes to stress granule formation and defining the stress granule transcriptome.

Authors:  Briana Van Treeck; David S W Protter; Tyler Matheny; Anthony Khong; Christopher D Link; Roy Parker
Journal:  Proc Natl Acad Sci U S A       Date:  2018-02-26       Impact factor: 11.205

9.  pos-1 encodes a cytoplasmic zinc-finger protein essential for germline specification in C. elegans.

Authors:  H Tabara; R J Hill; C C Mello; J R Priess; Y Kohara
Journal:  Development       Date:  1999-01       Impact factor: 6.868

10.  Drosophila germ granules are structured and contain homotypic mRNA clusters.

Authors:  Tatjana Trcek; Markus Grosch; Andrew York; Hari Shroff; Timothée Lionnet; Ruth Lehmann
Journal:  Nat Commun       Date:  2015-08-05       Impact factor: 14.919

View more
  54 in total

1.  Organizing the oocyte: RNA localization meets phase separation.

Authors:  Sarah E Cabral; Kimberly L Mowry
Journal:  Curr Top Dev Biol       Date:  2020-03-09       Impact factor: 4.897

2.  Phase Separation in Biology and Disease.

Authors:  Julie D Forman-Kay; Richard W Kriwacki; Geraldine Seydoux
Journal:  J Mol Biol       Date:  2018-09-11       Impact factor: 5.469

3.  Todos Santos small RNA symposium.

Authors:  Lindsay P Winkenbach; Rachel Doser; Kailee J Reed; Amy E Pasquinelli; Carolyn M Phillips; Julie M Claycomb
Journal:  RNA Biol       Date:  2019-08-09       Impact factor: 4.652

Review 4.  Harnessing biomolecular condensates in living cells.

Authors:  Hideki Nakamura; Robert DeRose; Takanari Inoue
Journal:  J Biochem       Date:  2019-07-01       Impact factor: 3.387

5.  Stress granule formation, disassembly, and composition are regulated by alphavirus ADP-ribosylhydrolase activity.

Authors:  Aravinth Kumar Jayabalan; Srivathsan Adivarahan; Aakash Koppula; Rachy Abraham; Mona Batish; Daniel Zenklusen; Diane E Griffin; Anthony K L Leung
Journal:  Proc Natl Acad Sci U S A       Date:  2021-02-09       Impact factor: 11.205

Review 6.  Membraneless organelles: P granules in Caenorhabditis elegans.

Authors:  Elisabeth A Marnik; Dustin L Updike
Journal:  Traffic       Date:  2019-04-11       Impact factor: 6.215

7.  Caenorhabditis elegans DLC-1 associates with ribonucleoprotein complexes to promote mRNA regulation.

Authors:  Nicholas J Day; Mary Ellenbecker; Ekaterina Voronina
Journal:  FEBS Lett       Date:  2018-10-24       Impact factor: 4.124

8.  The Dynamics of P Granule Liquid Droplets Are Regulated by the Caenorhabditis elegans Germline RNA Helicase GLH-1 via Its ATP Hydrolysis Cycle.

Authors:  Wenjun Chen; Yabing Hu; Charles F Lang; Jordan S Brown; Sierra Schwabach; Xiaoyan Song; Ying Zhang; Edwin Munro; Karen Bennett; Donglei Zhang; Heng-Chi Lee
Journal:  Genetics       Date:  2020-04-03       Impact factor: 4.562

Review 9.  Asymmetric inheritance of epigenetic states in asymmetrically dividing stem cells.

Authors:  Emily H Zion; Chinmayi Chandrasekhara; Xin Chen
Journal:  Curr Opin Cell Biol       Date:  2020-08-29       Impact factor: 8.382

Review 10.  Going with the flow: insights from Caenorhabditis elegans zygote polarization.

Authors:  Alicia G Gubieda; John R Packer; Iolo Squires; Jack Martin; Josana Rodriguez
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2020-08-24       Impact factor: 6.237

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.