Literature DB >> 30092212

The CeNGEN Project: The Complete Gene Expression Map of an Entire Nervous System.

Marc Hammarlund1, Oliver Hobert2, David M Miller3, Nenad Sestan4.   

Abstract

Differential gene expression defines individual neuron types and determines how each contributes to circuit physiology and responds to injury and disease. The C. elegans Neuronal Gene Expression Map & Network (CeNGEN) will establish a comprehensive gene expression atlas of an entire nervous system at single-neuron resolution.
Copyright © 2018. Published by Elsevier Inc.

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Year:  2018        PMID： 30092212      PMCID： PMC6576255          DOI： 10.1016/j.neuron.2018.07.042

Source DB:  PubMed          Journal:  Neuron        ISSN： 0896-6273            Impact factor:   17.173


  10 in total

1.  The structure of the nervous system of the nematode Caenorhabditis elegans.

Authors:  J G White; E Southgate; J N Thomson; S Brenner
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1986-11-12       Impact factor: 6.237

Review 2.  Revisiting Neuronal Cell Type Classification in Caenorhabditis elegans.

Authors:  Oliver Hobert; Lori Glenwinkel; John White
Journal:  Curr Biol       Date:  2016-11-21       Impact factor: 10.834

3.  Comprehensive single-cell transcriptional profiling of a multicellular organism.

Authors:  Junyue Cao; Jonathan S Packer; Vijay Ramani; Darren A Cusanovich; Chau Huynh; Riza Daza; Xiaojie Qiu; Choli Lee; Scott N Furlan; Frank J Steemers; Andrew Adey; Robert H Waterston; Cole Trapnell; Jay Shendure
Journal:  Science       Date:  2017-08-18       Impact factor: 47.728

4.  Post-embryonic cell lineages of the nematode, Caenorhabditis elegans.

Authors:  J E Sulston; H R Horvitz
Journal:  Dev Biol       Date:  1977-03       Impact factor: 3.582

5.  The embryonic cell lineage of the nematode Caenorhabditis elegans.

Authors:  J E Sulston; E Schierenberg; J G White; J N Thomson
Journal:  Dev Biol       Date:  1983-11       Impact factor: 3.582

6.  The connectome of a decision-making neural network.

Authors:  Travis A Jarrell; Yi Wang; Adam E Bloniarz; Christopher A Brittin; Meng Xu; J Nichol Thomson; Donna G Albertson; David H Hall; Scott W Emmons
Journal:  Science       Date:  2012-07-27       Impact factor: 47.728

7.  Molecular and cellular reorganization of neural circuits in the human lineage.

Authors:  André M M Sousa; Ying Zhu; Mary Ann Raghanti; Robert R Kitchen; Marco Onorati; Andrew T N Tebbenkamp; Bernardo Stutz; Kyle A Meyer; Mingfeng Li; Yuka Imamura Kawasawa; Fuchen Liu; Raquel Garcia Perez; Marta Mele; Tiago Carvalho; Mario Skarica; Forrest O Gulden; Mihovil Pletikos; Akemi Shibata; Alexa R Stephenson; Melissa K Edler; John J Ely; John D Elsworth; Tamas L Horvath; Patrick R Hof; Thomas M Hyde; Joel E Kleinman; Daniel R Weinberger; Mark Reimers; Richard P Lifton; Shrikant M Mane; James P Noonan; Matthew W State; Ed S Lein; James A Knowles; Tomas Marques-Bonet; Chet C Sherwood; Mark B Gerstein; Nenad Sestan
Journal:  Science       Date:  2017-11-24       Impact factor: 47.728

8.  Isolation of specific neurons from C. elegans larvae for gene expression profiling.

Authors:  W Clay Spencer; Rebecca McWhirter; Tyne Miller; Pnina Strasbourger; Owen Thompson; LaDeana W Hillier; Robert H Waterston; David M Miller
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10.  Sex-specific pruning of neuronal synapses in Caenorhabditis elegans.

Authors:  Meital Oren-Suissa; Emily A Bayer; Oliver Hobert
Journal:  Nature       Date:  2016-05-04       Impact factor: 49.962
  10 in total
  21 in total

Review 1.  Single cell RNA-sequencing: replicability of cell types.

Authors:  Megan Crow; Jesse Gillis
Journal:  Curr Opin Neurobiol       Date:  2019-01-09       Impact factor: 6.627

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3.  Distinct roles for two Caenorhabditis elegans acid-sensing ion channels in an ultradian clock.

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Review 4.  C. elegans as an Animal Model to Study the Intersection of DNA Repair, Aging and Neurodegeneration.

Authors:  Francisco José Naranjo-Galindo; Ruixue Ai; Evandro Fei Fang; Hilde Loge Nilsen; Tanima SenGupta
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5.  Chemosensory signal transduction in Caenorhabditis elegans.

Authors:  Denise M Ferkey; Piali Sengupta; Noelle D L'Etoile
Journal:  Genetics       Date:  2021-03-31       Impact factor: 4.562

6.  Molecular topography of an entire nervous system.

Authors:  Seth R Taylor; Gabriel Santpere; Alexis Weinreb; Alec Barrett; Molly B Reilly; Chuan Xu; Erdem Varol; Panos Oikonomou; Lori Glenwinkel; Rebecca McWhirter; Abigail Poff; Manasa Basavaraju; Ibnul Rafi; Eviatar Yemini; Steven J Cook; Alexander Abrams; Berta Vidal; Cyril Cros; Saeed Tavazoie; Nenad Sestan; Marc Hammarlund; Oliver Hobert; David M Miller
Journal:  Cell       Date:  2021-07-07       Impact factor: 66.850

Review 7.  Wired for insight-recent advances in Caenorhabditis elegans neural circuits.

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8.  Distinct mechanoreceptor pezo-1 isoforms modulate food intake in the nematode Caenorhabditis elegans.

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9.  Fast deep neural correspondence for tracking and identifying neurons in C. elegans using semi-synthetic training.

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Review 10.  Genomic Indexing by Somatic Gene Recombination of mRNA/ncRNA - Does It Play a Role in Genomic Mosaicism, Memory Formation, and Alzheimer's Disease?

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Journal:  Front Genet       Date:  2020-04-29       Impact factor: 4.599
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