Literature DB >> 30086383

Antibody validation: a view from the mountains.

Michael J Taussig1, Cláudia Fonseca2, James S Trimmer3.   

Abstract

Validation of antibodies and other protein binders is a subject of pressing concern for the research community and one which is uppermost in the minds of all who use antibodies as research and diagnostic reagents. Assessing an antibody's fitness for purpose includes accurate ascertainment of its target specificity and suitability for the envisaged task. Moreover, standardised procedures are essential to guarantee sample quality in testing procedures. The problem of defining precise standards for antibody validation has engendered much debate in recent publications and meetings, but gradually a consensus is emerging. At the 8th Alpbach Affinity Proteomics workshop (March 2017), a panel of leaders in the antibody field discussed suggestions which could bring this complex but essential issue a step nearer to a resolution. 'Alpbach recommendations' for best practice include tailoring binder validation processes according to the intended applications and promoting greater transparency in publications and in the information available from commercial antibody developers/providers. A single approach will not fit all applications and end users must ensure that the reported validation holds for their specific requirements, highlighting the need for adequate training in the fundamentals of antibody characterisation and validation across the user community.
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Affinity proteomics; Alpbach workshop; Antibody characterization; Antibody validation; Antibody validation guidelines; Pre-analytics

Mesh:

Substances:

Year:  2018        PMID: 30086383      PMCID: PMC6128662          DOI: 10.1016/j.nbt.2018.08.002

Source DB:  PubMed          Journal:  N Biotechnol        ISSN: 1871-6784            Impact factor:   5.079


  45 in total

1.  Minimum information about a protein affinity reagent (MIAPAR).

Authors:  Julie Bourbeillon; Sandra Orchard; Itai Benhar; Carl Borrebaeck; Antoine de Daruvar; Stefan Dübel; Ronald Frank; Frank Gibson; David Gloriam; Niall Haslam; Tara Hiltker; Ian Humphrey-Smith; Michael Hust; David Juncker; Manfred Koegl; Zoltàn Konthur; Bernhard Korn; Sylvia Krobitsch; Serge Muyldermans; Per-Ake Nygren; Sandrine Palcy; Bojan Polic; Henry Rodriguez; Alan Sawyer; Martin Schlapshy; Michael Snyder; Oda Stoevesandt; Michael J Taussig; Markus Templin; Matthias Uhlen; Silvere van der Maarel; Christer Wingren; Henning Hermjakob; David Sherman
Journal:  Nat Biotechnol       Date:  2010-07       Impact factor: 54.908

2.  Analytically Sensitive Protein Detection in Microtiter Plates by Proximity Ligation with Rolling Circle Amplification.

Authors:  Tonge Ebai; Felipe Marques Souza de Oliveira; Liza Löf; Lotta Wik; Caroline Schweiger; Anders Larsson; Ulrich Keilholtz; Johannes Haybaeck; Ulf Landegren; Masood Kamali-Moghaddam
Journal:  Clin Chem       Date:  2017-06-30       Impact factor: 8.327

3.  Antibody performance in western blot applications is context-dependent.

Authors:  Cajsa Algenäs; Charlotta Agaton; Linn Fagerberg; Anna Asplund; Lisa Björling; Erik Björling; Caroline Kampf; Emma Lundberg; Peter Nilsson; Anja Persson; Kenneth Wester; Fredrik Pontén; Henrik Wernérus; Mathias Uhlén; Jenny Ottosson Takanen; Sophia Hober
Journal:  Biotechnol J       Date:  2014-01-29       Impact factor: 4.677

4.  [Letter to the Editor] The need for improved education and training in research antibody usage and validation practices.

Authors:  Leonard P Freedman; Mark C Gibson; Andrew R M Bradbury; Arthur M Buchberg; Darryl Davis; Marisa P Dolled-Filhart; Fridtjof Lund-Johansen; David L Rimm
Journal:  Biotechniques       Date:  2016-07-01       Impact factor: 1.993

5.  A call for transparent reporting to optimize the predictive value of preclinical research.

Authors:  Story C Landis; Susan G Amara; Khusru Asadullah; Chris P Austin; Robi Blumenstein; Eileen W Bradley; Ronald G Crystal; Robert B Darnell; Robert J Ferrante; Howard Fillit; Robert Finkelstein; Marc Fisher; Howard E Gendelman; Robert M Golub; John L Goudreau; Robert A Gross; Amelie K Gubitz; Sharon E Hesterlee; David W Howells; John Huguenard; Katrina Kelner; Walter Koroshetz; Dimitri Krainc; Stanley E Lazic; Michael S Levine; Malcolm R Macleod; John M McCall; Richard T Moxley; Kalyani Narasimhan; Linda J Noble; Steve Perrin; John D Porter; Oswald Steward; Ellis Unger; Ursula Utz; Shai D Silberberg
Journal:  Nature       Date:  2012-10-11       Impact factor: 49.962

6.  Quality Matters: 2016 Annual Conference of the National Infrastructures for Biobanking.

Authors:  Marika Doucet; Karl Friedrich Becker; Jens Björkman; Jacques Bonnet; Bruno Clément; Maria-Grazia Daidone; Charles Duyckaerts; Gilles Erb; Helmuth Haslacher; Paul Hofman; Berthold Huppertz; Christophe Junot; Joakim Lundeberg; Andres Metspalu; Marialuisa Lavitrano; Jan-Eric Litton; Helen M Moore; Manuel Morente; Ben-Youssef Naimi; Uwe Oelmueller; Bill Ollier; Barbara Parodi; Liangliang Ruan; Giorgio Stanta; Paola Turano; Jim Vaught; Peter Watson; H-Erich Wichmann; Martin Yuille; Myriam Zaomi; Kurt Zatloukal; Georges Dagher
Journal:  Biopreserv Biobank       Date:  2016-12-19       Impact factor: 2.300

7.  Policy: NIH plans to enhance reproducibility.

Authors:  Francis S Collins; Lawrence A Tabak
Journal:  Nature       Date:  2014-01-30       Impact factor: 49.962

8.  Validation of commercial Mas receptor antibodies for utilization in Western Blotting, immunofluorescence and immunohistochemistry studies.

Authors:  Valeria Burghi; Natalia Cristina Fernández; Yamila Belén Gándola; Verónica Gabriela Piazza; Diego Tomás Quiroga; Érica Guilhen Mario; Janaína Felix Braga; Michael Bader; Robson Augusto Souza Santos; Fernando Pablo Dominici; Marina Cecilia Muñoz
Journal:  PLoS One       Date:  2017-08-16       Impact factor: 3.240

9.  Insufficient antibody validation challenges oestrogen receptor beta research.

Authors:  Sandra Andersson; Mårten Sundberg; Nusa Pristovsek; Ahmed Ibrahim; Philip Jonsson; Borbala Katona; Carl-Magnus Clausson; Agata Zieba; Margareta Ramström; Ola Söderberg; Cecilia Williams; Anna Asplund
Journal:  Nat Commun       Date:  2017-06-15       Impact factor: 14.919

10.  When monoclonal antibodies are not monospecific: Hybridomas frequently express additional functional variable regions.

Authors:  Andrew R M Bradbury; Nathan D Trinklein; Holger Thie; Ian C Wilkinson; Atul K Tandon; Stephen Anderson; Catherine L Bladen; Brittany Jones; Shelley Force Aldred; Marco Bestagno; Oscar Burrone; Jennifer Maynard; Fortunato Ferrara; James S Trimmer; Janina Görnemann; Jacob Glanville; Philipp Wolf; Andre Frenzel; Julin Wong; Xin Yu Koh; Hui-Yan Eng; David Lane; Marie-Paule Lefranc; Mike Clark; Stefan Dübel
Journal:  MAbs       Date:  2018-03-29       Impact factor: 5.857

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  13 in total

1.  Development, Screening, and Validation of Camelid-Derived Nanobodies for Neuroscience Research.

Authors:  Clara E Gavira-O'Neill; Jie-Xian Dong; James S Trimmer
Journal:  Curr Protoc Neurosci       Date:  2020-12

Review 2.  Multiplex Immunofluorescence and the Digital Image Analysis Workflow for Evaluation of the Tumor Immune Environment in Translational Research.

Authors:  Frank Rojas; Sharia Hernandez; Rossana Lazcano; Caddie Laberiano-Fernandez; Edwin Roger Parra
Journal:  Front Oncol       Date:  2022-06-27       Impact factor: 5.738

3.  Generation and validation of recombinant antibodies to study human aminoacyl-tRNA synthetases.

Authors:  Charlotta Preger; Edvard Wigren; Elena Ossipova; Carolyn Marks; Johan Lengqvist; Camilla Hofström; Oskar Andersson; Per-Johan Jakobsson; Susanne Gräslund; Helena Persson
Journal:  J Biol Chem       Date:  2020-08-14       Impact factor: 5.157

4.  Implementation of an antibody characterization procedure and application to the major ALS/FTD disease gene C9ORF72.

Authors:  Carl Laflamme; Paul M McKeever; Rahul Kumar; Julie Schwartz; Mahshad Kolahdouzan; Carol X Chen; Zhipeng You; Faiza Benaliouad; Opher Gileadi; Heidi M McBride; Thomas M Durcan; Aled M Edwards; Luke M Healy; Janice Robertson; Peter S McPherson
Journal:  Elife       Date:  2019-10-15       Impact factor: 8.140

5.  Differentiation, Quantification and Identification of Abrin and Abrus precatorius Agglutinin.

Authors:  Sylvia Worbs; Bettina Kampa; Martin Skiba; Eva-Maria Hansbauer; Daniel Stern; Hervé Volland; François Becher; Stéphanie Simon; Martin B Dorner; Brigitte G Dorner
Journal:  Toxins (Basel)       Date:  2021-04-18       Impact factor: 4.546

6.  Epitope-directed monoclonal antibody production using a mixed antigen cocktail facilitates antibody characterization and validation.

Authors:  Oi Wah Liew; Samantha S M Ling; Shera Lilyanna; Yue Zhou; Peipei Wang; Jenny P C Chong; Yan Xia Ng; Angeline E S Lim; Eliot R Y Leong; Qifeng Lin; Teck Kwang Lim; Qingsong Lin; Enoch M W Ng; Tuck Wah Ng; A Mark Richards
Journal:  Commun Biol       Date:  2021-04-06

7.  Interlaboratory Study for Characterizing Monoclonal Antibodies by Top-Down and Middle-Down Mass Spectrometry.

Authors:  Kristina Srzentić; Luca Fornelli; Yury O Tsybin; Joseph A Loo; Henrique Seckler; Jeffrey N Agar; Lissa C Anderson; Dina L Bai; Alain Beck; Jennifer S Brodbelt; Yuri E M van der Burgt; Julia Chamot-Rooke; Sneha Chatterjee; Yunqiu Chen; David J Clarke; Paul O Danis; Jolene K Diedrich; Robert A D'Ippolito; Mathieu Dupré; Natalia Gasilova; Ying Ge; Young Ah Goo; David R Goodlett; Sylvester Greer; Kim F Haselmann; Lidong He; Christopher L Hendrickson; Joshua D Hinkle; Matthew V Holt; Sam Hughes; Donald F Hunt; Neil L Kelleher; Anton N Kozhinov; Ziqing Lin; Christian Malosse; Alan G Marshall; Laure Menin; Robert J Millikin; Konstantin O Nagornov; Simone Nicolardi; Ljiljana Paša-Tolić; Stuart Pengelley; Neil R Quebbemann; Anja Resemann; Wendy Sandoval; Richa Sarin; Nicholas D Schmitt; Jeffrey Shabanowitz; Jared B Shaw; Michael R Shortreed; Lloyd M Smith; Frank Sobott; Detlev Suckau; Timothy Toby; Chad R Weisbrod; Norelle C Wildburger; John R Yates; Sung Hwan Yoon; Nicolas L Young; Mowei Zhou
Journal:  J Am Soc Mass Spectrom       Date:  2020-08-19       Impact factor: 3.109

8.  High-throughput screening and validation of antibodies against synaptic proteins to explore opioid signaling dynamics.

Authors:  Mariana Lemos Duarte; Nikita A Trimbake; Achla Gupta; Christine Tumanut; Xiaomin Fan; Catherine Woods; Akila Ram; Ivone Gomes; Erin N Bobeck; Deborah Schechtman; Lakshmi A Devi
Journal:  Commun Biol       Date:  2021-02-22

9.  A toolbox of IgG subclass-switched recombinant monoclonal antibodies for enhanced multiplex immunolabeling of brain.

Authors:  Nicolas P Andrews; Justin X Boeckman; Colleen F Manning; Joe T Nguyen; Hannah Bechtold; Camelia Dumitras; Belvin Gong; Kimberly Nguyen; Deborah van der List; Karl D Murray; JoAnne Engebrecht; James S Trimmer
Journal:  Elife       Date:  2019-01-22       Impact factor: 8.140

10.  The Antibody Society's antibody validation webinar series.

Authors:  Jan L A Voskuil; Anita Bandrowski; C Glenn Begley; Andrew R M Bradbury; Andrew D Chalmers; Aldrin V Gomes; Travis Hardcastle; Fridtjof Lund-Johansen; Andreas Plückthun; Giovanna Roncador; Alejandra Solache; Michael J Taussig; James S Trimmer; Cecilia Williams; Simon L Goodman
Journal:  MAbs       Date:  2020 Jan-Dec       Impact factor: 5.857

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