Literature DB >> 3005982

Stabilization of T4 polynucleotide kinase by macromolecular crowding.

B Harrison, S B Zimmerman.   

Abstract

T4 polynucleotide kinase rapidly loses activity during its reaction on duplex DNA termini. Addition of high concentrations of nonspecific polymers reverses or prevents this inactivation. In contrast, additions of related materials of lower molecular weight are relatively ineffective in stabilizing the kinase. Such a pattern suggests that the stabilizing effects of polymers on kinase activity are due to macromolecular crowding. An effect of crowding on the known tendency of the kinase to undergo oligomerization reactions is consistent with our observations.

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Year:  1986        PMID: 3005982      PMCID: PMC339578          DOI: 10.1093/nar/14.4.1863

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  11 in total

1.  Polynucleotide kinase exchange reaction: quantitave assay for restriction endonuclease-generated 5'-phosphoroyl termini in DNA.

Authors:  K L Berkner; W R Folk
Journal:  J Biol Chem       Date:  1977-05-25       Impact factor: 5.157

2.  Quantitation of the various termini generated by type II restriction endonucleases using the polynucleotide kinase exchange reaction.

Authors:  K L Berkner; W R Folk
Journal:  J Biol Chem       Date:  1979-04-10       Impact factor: 5.157

3.  Phosphorylation of double-stranded DNAs by T4 polynucleotide kinase.

Authors:  J R Lillehaug; R K Kleppe; K Kleppe
Journal:  Biochemistry       Date:  1976-05-04       Impact factor: 3.162

4.  Effect of salts and polyamines on T4 polynucleotide kinase.

Authors:  J R Lillehaug; K Kleppe
Journal:  Biochemistry       Date:  1975-03-25       Impact factor: 3.162

5.  Reversal of bacteriophage T4 induced polynucleotide kinase action.

Authors:  J H van de Sande; K Kleppe; H G Khorana
Journal:  Biochemistry       Date:  1973-12-04       Impact factor: 3.162

6.  The enzymatic phosphorylation of ribonucleic acid and deoxyribonucleic acid. II. Further properties of the 5'-hydroxyl polynucleotide kinase.

Authors:  A Novogrodsky; M Tal; A Traub; J Hurwitz
Journal:  J Biol Chem       Date:  1966-06-25       Impact factor: 5.157

7.  Phosphorylation of nucleic acid by an enzyme from T4 bacteriophage-infected Escherichia coli.

Authors:  C C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  1965-07       Impact factor: 11.205

8.  The effect of volume occupancy upon the thermodynamic activity of proteins: some biochemical consequences.

Authors:  A P Minton
Journal:  Mol Cell Biochem       Date:  1983       Impact factor: 3.396

9.  Nonspecific stabilization of stress-susceptible proteins by stress-resistant proteins: a model for the biological role of heat shock proteins.

Authors:  K W Minton; P Karmin; G M Hahn; A P Minton
Journal:  Proc Natl Acad Sci U S A       Date:  1982-12       Impact factor: 11.205

10.  Kinetic studies on the reaction catalyzed by polynucleotide kinase from phage T4-infected Escherichia coli.

Authors:  H Sano
Journal:  Biochim Biophys Acta       Date:  1976-01-23
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  6 in total

1.  New photoreactive tRNA derivatives for probing the peptidyl transferase center of the ribosome.

Authors:  Anton V Manuilov; Stephen S Hixson; Robert A Zimmermann
Journal:  RNA       Date:  2007-03-22       Impact factor: 4.942

2.  Two-step affinity purification of U7 small nuclear ribonucleoprotein particles using complementary biotinylated 2'-O-methyl oligoribonucleotides.

Authors:  H O Smith; K Tabiti; G Schaffner; D Soldati; U Albrecht; M L Birnstiel
Journal:  Proc Natl Acad Sci U S A       Date:  1991-11-01       Impact factor: 11.205

3.  Effects of macromolecular crowding on the association of E. coli ribosomal particles.

Authors:  S B Zimmerman; S O Trach
Journal:  Nucleic Acids Res       Date:  1988-07-25       Impact factor: 16.971

4.  Macromolecular crowding increases binding of DNA polymerase to DNA: an adaptive effect.

Authors:  S B Zimmerman; B Harrison
Journal:  Proc Natl Acad Sci U S A       Date:  1987-04       Impact factor: 11.205

Review 5.  What macromolecular crowding can do to a protein.

Authors:  Irina M Kuznetsova; Konstantin K Turoverov; Vladimir N Uversky
Journal:  Int J Mol Sci       Date:  2014-12-12       Impact factor: 5.923

6.  Regulation of DNA nucleases by molecular crowding.

Authors:  Yoshiharu Sasaki; Daisuke Miyoshi; Naoki Sugimoto
Journal:  Nucleic Acids Res       Date:  2007-06-12       Impact factor: 16.971

  6 in total

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