Literature DB >> 30054743

An End-to-End System for Automatic Urinary Particle Recognition with Convolutional Neural Network.

Yixiong Liang1, Rui Kang2, Chunyan Lian2, Yuan Mao2.   

Abstract

The urine sediment analysis of particles in microscopic images can assist physicians in evaluating patients with renal and urinary tract diseases. Manual urine sediment examination is labor-intensive, subjective and time-consuming, and the traditional automatic algorithms often extract the hand-crafted features for recognition. Instead of using the hand-crafted features, in this paper we propose to exploit convolutional neural network (CNN) to learn features in an end-to-end manner to recognize the urinary particle. We treat the urinary particle recognition as object detection and exploit two state-of-the-art CNN-based object detection methods, Faster R-CNN and single shot multibox detector (SSD), along with their variants for urinary particle recognition. We further investigate different factors involving these CNN-based methods to improve the performance of urinary particle recognition. We comprehensively evaluate these methods on a dataset consisting of 5,376 annotated images corresponding to 7 categories of urinary particle, i.e., erythrocyte, leukocyte, epithelial cell, crystal, cast, mycete, epithelial nuclei, and obtain a best mean average precision (mAP) of 84.1% while taking only 72 ms per image on a NVIDIA Titan X GPU.

Entities:  

Keywords:  CNN; Faster R-CNN; SSD; Urinary particle recognition

Mesh:

Year:  2018        PMID: 30054743     DOI: 10.1007/s10916-018-1014-6

Source DB:  PubMed          Journal:  J Med Syst        ISSN: 0148-5598            Impact factor:   4.460


  5 in total

1.  Urine sediment examination: a comparison of automated urinalysis systems and manual microscopy.

Authors:  Tzu-I Chien; Jau-Tsuen Kao; Hui-Lan Liu; Po-Chang Lin; Jhih-Sian Hong; Han-Peng Hsieh; Miao-Ju Chien
Journal:  Clin Chim Acta       Date:  2007-05-26       Impact factor: 3.786

2.  Automated recognition of urinary microscopic solid particles.

Authors:  Mohamed D Almadhoun; Alaa El-Halees
Journal:  J Med Eng Technol       Date:  2014-01-06

3.  Comparison of three automated systems for urine chemistry and sediment analysis in routine laboratory practice.

Authors:  Yasemin U Budak; Kağan Huysal
Journal:  Clin Lab       Date:  2011       Impact factor: 1.138

4.  A new method based on Adaptive Discrete Wavelet Entropy Energy and Neural Network Classifier (ADWEENN) for recognition of urine cells from microscopic images independent of rotation and scaling.

Authors:  Derya Avci; Mehmet Kemal Leblebicioglu; Mustafa Poyraz; Esin Dogantekin
Journal:  J Med Syst       Date:  2014-02-04       Impact factor: 4.460

5.  The comparison of automated urine analyzers with manual microscopic examination for urinalysis automated urine analyzers and manual urinalysis.

Authors:  Fatma Demet İnce; Hamit Yaşar Ellidağ; Mehmet Koseoğlu; Neşe Şimşek; Hülya Yalçın; Mustafa Osman Zengin
Journal:  Pract Lab Med       Date:  2016-03-11
  5 in total
  2 in total

1.  Morphological components detection for super-depth-of-field bio-micrograph based on deep learning.

Authors:  Xiaohui Du; Xiangzhou Wang; Fan Xu; Jing Zhang; Yibo Huo; Guangmin Ni; Ruqian Hao; Juanxiu Liu; Lin Liu
Journal:  Microscopy (Oxf)       Date:  2022-01-29       Impact factor: 1.571

2.  Rapid Detection of Urinary Tract Infection in 10 min by Tracking Multiple Phenotypic Features in a 30 s Large-Volume Scattering Video of Urine Microscopy.

Authors:  Fenni Zhang; Manni Mo; Jiapei Jiang; Xinyu Zhou; Michelle McBride; Yunze Yang; Kenta S Reilly; Thomas E Grys; Shelley E Haydel; Nongjian Tao; Shaopeng Wang
Journal:  ACS Sens       Date:  2022-08-05       Impact factor: 9.618

  2 in total

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