Literature DB >> 30054594

Genome-wide association study of intraocular pressure uncovers new pathways to glaucoma.

Stuart MacGregor1, Jue-Sheng Ong2, Jiyuan An2, Xikun Han2, Tiger Zhou3, Owen M Siggs3, Matthew H Law2, Emmanuelle Souzeau3, Shiwani Sharma3, David J Lynn4,5,6, Jonathan Beesley2, Bronwyn Sheldrick3, Richard A Mills3, John Landers3, Jonathan B Ruddle7, Stuart L Graham8, Paul R Healey9,10, Andrew J R White9, Robert J Casson11, Stephen Best12, John R Grigg10, Ivan Goldberg10, Joseph E Powell13,14, David C Whiteman2, Graham L Radford-Smith2,15, Nicholas G Martin2, Grant W Montgomery16, Kathryn P Burdon3,17, David A Mackey17,18, Puya Gharahkhani2, Jamie E Craig3, Alex W Hewitt7,17.   

Abstract

Intraocular pressure (IOP) is currently the sole modifiable risk factor for primary open-angle glaucoma (POAG), one of the leading causes of blindness worldwide1. Both IOP and POAG are highly heritable2. We report a combined analysis of participants from the UK Biobank (n = 103,914) and previously published data from the International Glaucoma Genetic Consortium (n = 29,578)3,4 that identified 101 statistically independent genome-wide-significant SNPs for IOP, 85 of which have not been previously reported4-12. We examined these SNPs in 11,018 glaucoma cases and 126,069 controls, and 53 SNPs showed evidence of association. Gene-based tests implicated an additional 22 independent genes associated with IOP. We derived an allele score based on the IOP loci and loci influencing optic nerve head morphology. In 1,734 people with advanced glaucoma and 2,938 controls, participants in the top decile of the allele score were at increased risk (odds ratio (OR) = 5.6; 95% confidence interval (CI): 4.1-7.6) of glaucoma relative to the bottom decile.

Entities:  

Mesh:

Year:  2018        PMID: 30054594     DOI: 10.1038/s41588-018-0176-y

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  50 in total

Review 1.  Genetic Risk Scores.

Authors:  Robert P Igo; Tyler G Kinzy; Jessica N Cooke Bailey
Journal:  Curr Protoc Hum Genet       Date:  2019-12

2.  Association of Myopia and Intraocular Pressure With Retinal Detachment in European Descent Participants of the UK Biobank Cohort: A Mendelian Randomization Study.

Authors:  Xikun Han; Jue-Sheng Ong; Jiyuan An; Jamie E Craig; Puya Gharahkhani; Alex W Hewitt; Stuart MacGregor
Journal:  JAMA Ophthalmol       Date:  2020-06-01       Impact factor: 7.389

3.  Genome-wide association analyses identify 139 loci associated with macular thickness in the UK Biobank cohort.

Authors:  X Raymond Gao; Hua Huang; Heejin Kim
Journal:  Hum Mol Genet       Date:  2019-04-01       Impact factor: 6.150

Review 4.  Methods for the Analysis and Interpretation for Rare Variants Associated with Complex Traits.

Authors:  J Dylan Weissenkampen; Yu Jiang; Scott Eckert; Bibo Jiang; Bingshan Li; Dajiang J Liu
Journal:  Curr Protoc Hum Genet       Date:  2019-03-08

5.  Cell atlas of aqueous humor outflow pathways in eyes of humans and four model species provides insight into glaucoma pathogenesis.

Authors:  Tavé van Zyl; Wenjun Yan; Alexi McAdams; Yi-Rong Peng; Karthik Shekhar; Aviv Regev; Dejan Juric; Joshua R Sanes
Journal:  Proc Natl Acad Sci U S A       Date:  2020-04-27       Impact factor: 11.205

6.  Sequencing Analysis at 8p23 Identifies Multiple Rare Variants in DLC1 Associated with Sleep-Related Oxyhemoglobin Saturation Level.

Authors:  Jingjing Liang; Brian E Cade; Karen Y He; Heming Wang; Jiwon Lee; Tamar Sofer; Stephanie Williams; Ruitong Li; Han Chen; Daniel J Gottlieb; Daniel S Evans; Xiuqing Guo; Sina A Gharib; Lauren Hale; David R Hillman; Pamela L Lutsey; Sutapa Mukherjee; Heather M Ochs-Balcom; Lyle J Palmer; Jessica Rhodes; Shaun Purcell; Sanjay R Patel; Richa Saxena; Katie L Stone; Weihong Tang; Gregory J Tranah; Eric Boerwinkle; Xihong Lin; Yongmei Liu; Bruce M Psaty; Ramachandran S Vasan; Michael H Cho; Ani Manichaikul; Edwin K Silverman; R Graham Barr; Stephen S Rich; Jerome I Rotter; James G Wilson; Susan Redline; Xiaofeng Zhu
Journal:  Am J Hum Genet       Date:  2019-10-24       Impact factor: 11.025

7.  Association of Genetic Variants With Primary Open-Angle Glaucoma Among Individuals With African Ancestry.

Authors:  Michael A Hauser; R Rand Allingham; Tin Aung; Carly J Van Der Heide; Kent D Taylor; Jerome I Rotter; Shih-Hsiu J Wang; Pieter W M Bonnemaijer; Susan E Williams; Sadiq M Abdullahi; Khaled K Abu-Amero; Michael G Anderson; Stephen Akafo; Mahmoud B Alhassan; Ifeoma Asimadu; Radha Ayyagari; Saydou Bakayoko; Prisca Biangoup Nyamsi; Donald W Bowden; William C Bromley; Donald L Budenz; Trevor R Carmichael; Pratap Challa; Yii-Der Ida Chen; Chimdi M Chuka-Okosa; Jessica N Cooke Bailey; Vital Paulino Costa; Dianne A Cruz; Harvey DuBiner; John F Ervin; Robert M Feldman; Miles Flamme-Wiese; Douglas E Gaasterland; Sarah J Garnai; Christopher A Girkin; Nouhoum Guirou; Xiuqing Guo; Jonathan L Haines; Christopher J Hammond; Leon Herndon; Thomas J Hoffmann; Christine M Hulette; Abba Hydara; Robert P Igo; Eric Jorgenson; Joyce Kabwe; Ngoy Janvier Kilangalanga; Nkiru Kizor-Akaraiwe; Rachel W Kuchtey; Hasnaa Lamari; Zheng Li; Jeffrey M Liebmann; Yutao Liu; Ruth J F Loos; Monica B Melo; Sayoko E Moroi; Joseph M Msosa; Robert F Mullins; Girish Nadkarni; Abdoulaye Napo; Maggie C Y Ng; Hugo Freire Nunes; Ebenezer Obeng-Nyarkoh; Anthony Okeke; Suhanya Okeke; Olusegun Olaniyi; Olusola Olawoye; Mariana Borges Oliveira; Louise R Pasquale; Rodolfo A Perez-Grossmann; Margaret A Pericak-Vance; Xue Qin; Michele Ramsay; Serge Resnikoff; Julia E Richards; Rui Barroso Schimiti; Kar Seng Sim; William E Sponsel; Paulo Vinicius Svidnicki; Alberta A H J Thiadens; Nkechinyere J Uche; Cornelia M van Duijn; José Paulo Cabral de Vasconcellos; Janey L Wiggs; Linda M Zangwill; Neil Risch; Dan Milea; Adeyinka Ashaye; Caroline C W Klaver; Robert N Weinreb; Allison E Ashley Koch; John H Fingert; Chiea Chuen Khor
Journal:  JAMA       Date:  2019-11-05       Impact factor: 56.272

8.  A comprehensive map of disease networks and molecular drug discoveries for glaucoma.

Authors:  Haixin Wang; Yanhui Deng; Ling Wan; Lulin Huang
Journal:  Sci Rep       Date:  2020-06-16       Impact factor: 4.379

Review 9.  Clinical implications of recent advances in primary open-angle glaucoma genetics.

Authors:  Hélène Choquet; Janey L Wiggs; Anthony P Khawaja
Journal:  Eye (Lond)       Date:  2019-10-23       Impact factor: 3.775

10.  Symptom-level modelling unravels the shared genetic architecture of anxiety and depression.

Authors:  Jackson G Thorp; Adrian I Campos; Andrew D Grotzinger; Zachary F Gerring; Jiyuan An; Jue-Sheng Ong; Wei Wang; Suyash Shringarpure; Enda M Byrne; Stuart MacGregor; Nicholas G Martin; Sarah E Medland; Christel M Middeldorp; Eske M Derks
Journal:  Nat Hum Behav       Date:  2021-04-15
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