| Literature DB >> 30052656 |
Amparo Lázaro1, Asier R Larrinaga2.
Abstract
Seed size is a fundamental life-history trait for plants. A seed number/size trade-off is assumed because the resources invested in reproduction are limited; however, such a trade-off is not always observed. This could be a consequence of the method used for testing it, where the null hypothesis is dictated by common statistical practice, rather than being based on any underlying theory. Alternatively, there might be some population- and species-dependent variables that affect resource availability and, in turn, influence the presence and intensity of this trade-off. Using data on 42 herbs from two communities (lowland and alpine) from Southern Norway, we tested the validity of the classical linear model vs. two previously proposed models, based on resource competition, when assessing the existence of this trade-off at different levels. We also evaluated whether some species- (fruit aggregation, ovules/flower) and population-dependent (pollen limitation) variables could affect this trade-off. Classical linear modelling outperformed the other proposed functional models. Significant seed number/size relationships were negative in single-fruited species, whereas they were positive in species with infructescences of one-seeded fruits. Concordantly, fruit organization was the most influencing variable for the intra-specific trade-off in the lowland community. In the alpine community, species suffering higher pollen limitation showed more strongly negative slopes between seed size and seed number at the fruit/infructescence level. Across species, seed size and number were negatively related, although the relationship was significant in only one of the communities. No evidence of trade-off was found at the plant level. Linear models provide a flexible framework that allows coping with the variability in the seed number/size relationship. The emergence of the intra-specific relationship between seed number and size depends on species- and population-dependent variables, related to resource allocation and the pollination environment.Entities:
Mesh:
Year: 2018 PMID: 30052656 PMCID: PMC6063417 DOI: 10.1371/journal.pone.0201175
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Plant species of each community included in this study.
Their family, the levels at which the trade-off was calculated (F: fruit; I: infructescence; P: plant), the pollen limitation indices (PL), and the average number of ovules per flowers or inflorescence are given. PL was estimated as 1- seed set of open pollinated plants / seed set of hand-pollinated plants (see [36], for details). Nomenclature follows [68].
| Community | Species | Family | Levels | PL | Ovu. / fl. | Community | Species | Family | Levels | PL | Ovu./flo. |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Lowland | Fabaceae | I, P | -0.12 | 1.69 | Alpine | Fabaceae | F, P | 0.18 | 4.053 | ||
| Asteraceae | I, P | -0.10 | 74.76 | Scrophulariaceae | F, P | 0.42 | 47.61 | ||||
| Asteraceae | I, P | NA | 77.48 | Campanulaceae | F, P | -0.03 | 121.37 | ||||
| Rosaceae | F, P | 0.01 | 58.49 | Caryophyllaceae | F, P | 0.02 | 42.74 | ||||
| Rubiaceae | F, P | NA | 42.00 | Rosaceae | F, P | -0.04 | 59.67 | ||||
| Rubiaceae | F, P | 0.02 | 15.69 | Asteraceae | I, P | -0.01 | 139.79 | ||||
| Geraniaceae | F, P | 0.21 | 4.28 | Gentianaceae | F, P | 0.02 | 172.91 | ||||
| Rosaceae | F, P | 0.01 | 77.33 | Geraniaceae | F, P | 0.17 | 4.92 | ||||
| Caprifoliaceae | I, P | -0.15 | 60.88 | Asteraceae | I, P | 0.13 | 39.29 | ||||
| Fabaceae | F, P | 0.12 | 9.36 | Celastraceae | F, P | -0.02 | 402.19 | ||||
| Asteraceae | I, P | -0.12 | 155.13 | Lentibulariaceae | F, P | 0.07 | 112.35 | ||||
| Linaceae | F, P | -0.12 | 9.73 | Rosaceae | F, P | -0.13 | 27.40 | ||||
| Fabaceae | F, P | 0.10 | 29.69 | Ranunculaceae | F, P | 0.09 | 23.46 | ||||
| Asteraceae | I, P | 0.20 | 42.58 | Asteraceae | I, P | -0.15 | 14.55 | ||||
| Asteraceae | I, P | 0.19 | 80.43 | Saxifragaceae | F, P | -0.18 | 144.79 | ||||
| Asteraceae | I, P | -0.13 | 26.42 | Caryophyllaceae | F, P | 0.79 | 17.36 | ||||
| Polygalaceae | F, P | 0.30 | 2.00 | Plantaginaceae | F, P | 0.09 | 53.33 | ||||
| Rosaceae | F, P | -0.21 | 37.60 | Plantaginaceae | F, P | -0.04 | 26.79 | ||||
| Rosaceae | F, P | -0.02 | 5.66 | ||||||||
| Rosaceae | F, P | -0.15 | 39.71 | ||||||||
| Lamiaceae | F, P | 0.26 | 3.26 | ||||||||
| Ranunculaceae | F, P | -0.03 | 24.91 | ||||||||
| Fabaceae | I, P | -0.24 | 1.03 | ||||||||
| Fabaceae | F, P | 0.63 | 4.89 |
Model comparison at the fruit or infructescence level (of one-seeded fruits).
A) The lowland and B) the alpine communities. Measurement level (Level): F, fruit; I, infructescence. n: number of individuals. LIN: classic linear models; S&F: Smith and Fretwell’s model [6]; L&G: Lescourret and Génard’s model [22]. Bold letters indicate the best model for each model selection criterion. ´Res. Analysis´ indicates the best model as assessed by residual analysis (only when AICc and RRMSE best models differed); ‘ = ´ indicates very similar residual plots. Empty cells correspond to models that did not converge.
| Community | Level | Species | AICc | RRMSE | Res. analysis | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| LIN | S&F | L&G | LIN | S&F | L&G | |||||
| A) Lowland | F | 39 | 127.48 | 98.47 | 0.45 | 0.46 | ||||
| 16 | 61.86 | 54.89 | 0.61 | 0.76 | ||||||
| 78 | 410.27 | 400.1 | 0.44 | 0.23 | ||||||
| 15 | 72.22 | 69.58 | 0.34 | 0.52 | LIN | |||||
| 15 | 122.29 | 84.57 | 0.23 | 1.16 | LIN | |||||
| 10 | 62.88 | 65.83 | 0.30 | 0.35 | L&G | |||||
| 71 | 476.48 | 392.81 | 0.78 | 2.21 | ||||||
| 16 | 44.31 | 29.65 | 0.61 | 1.23 | ||||||
| 48 | 102.83 | 168.51 | 0.32 | 0.27 | ||||||
| 14 | 58.76 | 61.37 | 0.51 | 1.16 | ||||||
| 50 | 212.04 | 310.12 | 0.18 | 0.22 | ||||||
| 35 | 196.87 | 251.68 | 0.28 | 0.23 | ||||||
| 24 | 113.68 | 136.56 | 0.30 | 0.43 | ||||||
| 22 | 54.93 | 39.83 | 0.54 | 1.29 | ||||||
| 23 | 141.91 | 143.64 | 0.22 | 0.24 | = | |||||
| I | 23 | 87.54 | 76.33 | 0.28 | 0.49 | LIN | ||||
| 54 | 207.71 | 154.21 | 0.54 | 1.51 | ||||||
| 24 | 143.21 | 131.26 | 0.23 | 0.64 | LIN | |||||
| 13 | 73.86 | 57.60 | 0.79 | |||||||
| 76 | 407.05 | 365.69 | 0.57 | 0.37 | ||||||
| 36 | 109.52 | 59.98 | 0.75 | 1.29 | ||||||
| 32 | 111.63 | 34.53 | 0.95 | 1.03 | ||||||
| 25 | 191.06 | 127.48 | 1.42 | 1.18 | ||||||
| 15 | 72.61 | 112.61 | 0.29 | 1.24 | ||||||
| B) Alpine | F | 35 | 92.34 | 84.56 | 0.23 | 0.34 | LIN | |||
| 46 | 146.04 | 121.31 | 0.59 | 1.35 | ||||||
| 27 | 146.41 | 127.23 | 0.61 | 2.38 | ||||||
| 28 | 128.73 | 73.11 | 0.86 | 0.68 | ||||||
| 39 | 207.29 | 180.95 | 0.58 | 0.32 | ||||||
| 40 | 178.91 | 199.41 | 0.51 | 5.64 | ||||||
| 19 | 79.55 | 97.63 | 0.53 | 1.55 | ||||||
| 73 | 292.32 | 315.77 | 0.49 | 4.98 | ||||||
| 16 | 32.39 | 54.04 | 0.33 | 12.1 | ||||||
| 55 | 223.31 | 263.75 | 0.29 | 0.38 | ||||||
| 42 | 92.82 | 60.14 | 0.48 | 0.85 | ||||||
| 15 | 96.5 | 68.68 | 1.12 | 3.83 | ||||||
| 42 | 177.05 | 190.65 | 0.39 | 0.46 | ||||||
| 52 | 142.83 | 304.16 | 0.16 | 0.91 | ||||||
| 15 | 97.57 | 77.79 | 0.95 | 0.37 | ||||||
| I | 47 | 401.32 | 320.61 | 1.21 | 1.36 | |||||
| 45 | 57.28 | 29.87 | 0.39 | 0.76 | ||||||
| 57 | 145.36 | 123.79 | 0.55 | 0.79 | ||||||
Model comparison at the plant level.
A) The lowland and B) the alpine communities. n: number of individuals. LIN: classic linear models; S&F: Smith & Fretwell’s model [6]; L&G: Lescourret & Génard’s model [22]. Bold letters indicate the best model for each model selection criterion. ´Res. Analysis´ indicates the best model as assessed by residual analysis (only when AICc and RRMSE best models differed).
| Community | Species | AICc | RRMSE | Res. analysis | |||||
|---|---|---|---|---|---|---|---|---|---|
| LIN | S&F | L&G | LIN | S&F | L&G | ||||
| A) Lowland | 19 | 199.11 | 197.25 | 0.23 | 0.32 | LIN | |||
| 12 | 83.73 | 103.99 | 0.30 | 0.41 | LIN | ||||
| 11 | 65.32 | 65.62 | 0.27 | 0.33 | |||||
| 15 | 152.72 | 154.08 | 0.29 | 0.35 | LIN | ||||
| 15 | 181.58 | 191.87 | 0.24 | 0.30 | LIN | ||||
| 15 | 38.64 | 28.80 | 0.64 | 1.21 | |||||
| 31 | 45.04 | 46.34 | 0.32 | 0.41 | LIN | ||||
| 14 | 61.43 | 61.27 | 0.22 | 0.49 | LIN | ||||
| 15 | 82.95 | 81.69 | 0.24 | 0.23 | S&F | ||||
| 14 | 101.64 | 103.86 | 0.25 | 0.36 | LIN | ||||
| B) Alpine | 15 | 67.83 | 63.41 | 0.24 | 0.33 | LIN | |||
| 15 | 101.96 | 97.17 | 0.25 | 0.39 | LIN | ||||
| 17 | 50.42 | 51.62 | 0.21 | 0.24 | |||||
| 18 | 131.78 | 130.75 | 0.31 | 0.41 | LIN | ||||
| 15 | 81.64 | 72.71 | 0.30 | 0.59 | LIN | ||||
| 10 | 31.52 | 29.12 | 0.55 | 0.39 | |||||
| 13 | 29.40 | 31.19 | 0.28 | 0.34 | LIN | ||||
| 15 | 35.31 | 26.68 | 0.52 | 0.84 | |||||
Results of the linear models testing the relationship between seed number and seed weight at the fruit/infructescence level.
A) the lowland and B) the alpine communities. F: fruit; I: infructescence; n: sample size, ß: standardized slope. is the level of significance following the Benjamini-Hochberg [41] procedure for controlling the false discovery rate in multiple testing. The null hypothesis (β = 0) is rejected when p> = q* (marked in bold).
| Community | Unit | Species | ||||||
|---|---|---|---|---|---|---|---|---|
| A) Lowland | F | 39 | -0.0382 | 1;37 | 0.06 | 0.816 | 0.05 | |
| 16 | -0.1538 | 1;14 | 0.39 | 0.544 | 0.035 | |||
| 78 | 0.0640 | 1;76 | 0.32 | 0.573 | 0.040 | |||
| 15 | 0.0907 | 1;13 | 0.12 | 0.730 | 0.044 | |||
| 15 | 0.3422 | 1;13 | 1.99 | 0.182 | 0.017 | |||
| 10 | 0.2872 | 1;8 | 0.90 | 0.371 | 0.029 | |||
| 71 | 0.1310 | 1;69 | 1.24 | 0.270 | 0.025 | |||
| 16 | -0.1989 | 1;14 | 0.66 | 0.430 | 0.033 | |||
| 48 | -0.0823 | 1;46 | 0.33 | 0.570 | 0.038 | |||
| 14 | -0.8159 | 1;12 | 27.87 | 0.004 | ||||
| 50 | -0.3612 | 1;48 | 7.50 | 0.009 | 0.008 | |||
| 35 | -0.1996 | 1;33 | 1.45 | 0.236 | 0.018 | |||
| 24 | -0.6432 | 1;22 | 16.92 | 0.004 | ||||
| 22 | -0.2392 | 1;20 | 1.34 | 0.261 | 0.023 | |||
| 23 | 0.0562 | 1;21 | 0.07 | 0.790 | 0.048 | |||
| I | 23 | -0.091 | 1;21 | 0.19 | 0.666 | 0.042 | ||
| 54 | 0.1845 | 1;52 | 1.91 | 0.173 | 0.015 | |||
| 24 | 0.5609 | 1;22 | 11.02 | 0.006 | ||||
| 13 | -0.2375 | 1;11 | 0.78 | 0.397 | 0.031 | |||
| 76 | -0.1031 | 1;74 | 0.82 | 0.369 | 0.027 | |||
| 36 | 0.3207 | 1;34 | 4.06 | 0.052 | 0.013 | |||
| 32 | 0.0624 | 1;30 | 0.12 | 0.731 | 0.046 | |||
| 25 | 0.4308 | 1;23 | 5.71 | 0.025 | 0.010 | |||
| 15 | 0.2977 | 1;13 | 1.46 | 0.248 | 0.021 | |||
| B) Alpine | F | 35 | -0.084 | 1;33 | 0.25 | 0.620 | 0.042 | |
| 46 | -0.4346 | 1;44 | 10.74 | 0.006 | ||||
| 27 | 0.4479 | 1;25 | 6.65 | 0.017 | ||||
| 28 | -0.4797 | 1;26 | 8.38 | 0.011 | ||||
| 39 | 0.2281 | 1;37 | 2.14 | 0.152 | 0.025 | |||
| 40 | 0 | 1;38 | 0.02 | 0.903 | 0.044 | |||
| 19 | 0.2780 | 1;17 | 1.59 | 0.224 | 0.031 | |||
| 73 | 0.3014 | 1;71 | 5.31 | 0.024 | 0.019 | |||
| 16 | -0.3027 | 1;14 | 1.14 | 0.304 | 0.036 | |||
| 55 | -0.1887 | 1;53 | 2.03 | 0.160 | 0.028 | |||
| 42 | 0.0004 | 1;40 | 0.00 | 0.998 | 0.05 | |||
| 15 | 0.4523 | 1;13 | 3.67 | 0.077 | 0.022 | |||
| 42 | -0.4573 | 1;40 | 11.11 | 0.006 | ||||
| 52 | -0.3461 | 1;50 | 7.08 | 0.014 | ||||
| 15 | 0.2884 | 1;13 | 1.33 | 0.269 | 0.033 | |||
| I | 47 | -0.1432 | 1;45 | 0.91 | 0.346 | 0.039 | ||
| 45 | 0.0072 | 1;43 | 0.00 | 0.962 | 0.047 | |||
| 57 | 0.3491 | 1;55 | 7.91 | 0.008 |
Fig 1Seed number/size relationship and pollen limitation.
Partial residual plot showing the relationship between the standardised slope (β) for the relationship between seed number and size and the pollen limitation index (PL) in the alpine community. PL was calculated as 1- seed set of open pollinated plants / seed set of hand-pollinated plants (see [36] for details), and increases as the value of the index increases. Lines represent the estimates of the best model, and dots represent the partial residuals of the model (sampling units are plant species).
Results of the linear models testing the relationship between seed number and seed weight at the plant level.
A) the lowland and B) the alpine communities. n: sample size, β: standardized slope. is the level of significance following the Benjamini-Hochberg [41] procedure for controlling the false discovery rate in multiple testing. The null hypothesis (β = 0) is rejected when p> = q*.
| Community | Species | ||||||
|---|---|---|---|---|---|---|---|
| A) Lowland | 19 | 0.0367 | 1;17 | 0.03 | 0.875 | 0.050 | |
| 12 | -0.2710 | 1;10 | 0.95 | 0.352 | 0.020 | ||
| 11 | -0.4268 | 1;9 | 2.45 | 0.152 | 0.010 | ||
| 15 | -0.0452 | 1;13 | 0.03 | 0.864 | 0.045 | ||
| 15 | -0.1824 | 1;13 | 0.52 | 0.485 | 0.030 | ||
| 15 | 0.3575 | 1;13 | 2.20 | 0.162 | 0.015 | ||
| 12 | 0.2626 | 1;10 | 0.89 | 0.368 | 0.025 | ||
| 14 | 0.3840 | 1;12 | 2.42 | 0.146 | 0.005 | ||
| 15 | -0.1723 | 1;13 | 0.46 | 0.510 | 0.035 | ||
| 14 | -0.0905 | 1;12 | 0.12 | 0.740 | 0.040 | ||
| B) Alpine | 15 | -0.2500 | 1;13 | 1.00 | 0.335 | 0.019 | |
| 15 | -0.2487 | 1;13 | 0.99 | 0.338 | 0.025 | ||
| 17 | -0.5871 | 1;15 | 8.94 | 0.009 | 0.006 | ||
| 18 | -0.0305 | 1;16 | 0.02 | 0.898 | 0.044 | ||
| 15 | 0.1270 | 1;13 | 0.25 | 0.628 | 0.038 | ||
| 10 | -0.0347 | 1;8 | 0.01 | 0.915 | 0.050 | ||
| 13 | -0.4559 | 1;11 | 3.41 | 0.092 | 0.013 | ||
| 15 | -0.2369 | 1;13 | 0.89 | 0.362 | 0.031 |
Fig 2Inter-specific seed number/size trade off.
Partial residual plot showing the inter-specific relationship between the log-transformed mean seed number and log-transformed mean seed weight for A) the Lowland community and B) the Alpine community, as estimated by the best model. Dots represent the partial residuals of the model (sampling units are plant species).