Literature DB >> 30051939

Entropic allostery dominates the phosphorylation-dependent regulation of Syk tyrosine kinase release from immunoreceptor tyrosine-based activation motifs.

Chao Feng1, Amitava Roy2, Carol Beth Post1.   

Abstract

Spleen tyrosine kinase (Syk) is an essential player in immune signaling through its ability to couple multiple classes of membrane immunoreceptors to intracellular signaling pathways. Ligand binding leads to the recruitment of Syk to a phosphorylated cytoplasmic region of the receptors called ITAM. Syk binds to ITAM with high-affinity (nanomolar Kd ) via its tandem pair of SH2 domains. The affinity between Syk and ITAM is allosterically regulated by phosphorylation at Y130 in a linker connecting the tandem SH2 domains; when Y130 is phosphorylated, the binding affinity decreases (micromolar Kd ). Previous equilibrium binding studies attribute the increase in the binding free energy to an intra-molecular binding (isomerization) step of the tandem SH2 and ITAM, but a physical basis for the increased free energy is unknown. Here, we provide evidence that Y130 phosphorylation imposes an entropy penalty to isomerization, but surprisingly, has negligible effect on the SH2 binding interactions with ITAM and thus on the binding enthalpy. An analysis of NMR chemical shift differences characterized conformational effects of ITAM binding, and binding thermodynamics were measured from isothermal titration calorimetry. Together the data support a previously unknown mechanism for the basis of regulating protein-protein interactions through protein phosphorylation. The decreased affinity for Syk association with immune receptor ITAMs by Y130 phosphorylation is an allosteric mechanism driven by an increased entropy penalty, likely contributed by conformational disorder in the SH2-SH2 inter-domain structure, while SH2-ITAM binding contacts are not affected, and binding enthalpy is unchanged.
© 2018 The Protein Society.

Entities:  

Keywords:  NMR chemical shift difference analysis; doubly phosphorylated immunoreceptor tyrosine-based activation motif (dp-ITAM); entropic allostery; isothermal titration calorimetry model and data analysis; multi-domain ensemble thermodynamics; multistate equilibrium with isomerization; regulation of protein-protein interaction; spleen tyrosine kinase (Syk); tandem SH2 domain (tSH2); tyrosine phosphorylation allostery

Mesh:

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Year:  2018        PMID: 30051939      PMCID: PMC6225982          DOI: 10.1002/pro.3489

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  56 in total

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3.  Combined chemical shift changes and amino acid specific chemical shift mapping of protein-protein interactions.

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Journal:  J Biomol NMR       Date:  2007-10-23       Impact factor: 2.835

4.  Long-distance correlations of rhinovirus capsid dynamics contribute to uncoating and antiviral activity.

Authors:  Amitava Roy; Carol Beth Post
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-21       Impact factor: 11.205

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Authors:  Chih-Hong Chen; Dan Piraner; Nina M Gorenstein; Robert L Geahlen; Carol Beth Post
Journal:  Biopolymers       Date:  2013-11       Impact factor: 2.505

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Authors:  Mariya O Krisenko; Robert L Geahlen
Journal:  Biochim Biophys Acta       Date:  2014-11-04

7.  Structural and biophysical characterization of the Syk activation switch.

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Journal:  J Mol Biol       Date:  2012-11-12       Impact factor: 5.469

Review 8.  Syk and pTyr'd: Signaling through the B cell antigen receptor.

Authors:  Robert L Geahlen
Journal:  Biochim Biophys Acta       Date:  2009-03-21

Review 9.  The SYK tyrosine kinase: a crucial player in diverse biological functions.

Authors:  Attila Mócsai; Jürgen Ruland; Victor L J Tybulewicz
Journal:  Nat Rev Immunol       Date:  2010-06       Impact factor: 53.106

10.  Dynamic Allostery of the Catabolite Activator Protein Revealed by Interatomic Forces.

Authors:  Maxime Louet; Christian Seifert; Ulf Hensen; Frauke Gräter
Journal:  PLoS Comput Biol       Date:  2015-08-05       Impact factor: 4.475

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  2 in total

1.  Analyzing In Silico the Relationship Between the Activation of the Edema Factor and Its Interaction With Calmodulin.

Authors:  Irène Pitard; Damien Monet; Pierre L Goossens; Arnaud Blondel; Thérèse E Malliavin
Journal:  Front Mol Biosci       Date:  2020-12-04

2.  Differences in the dynamics of the tandem-SH2 modules of the Syk and ZAP-70 tyrosine kinases.

Authors:  Helen T Hobbs; Neel H Shah; Jean M Badroos; Christine L Gee; Susan Marqusee; John Kuriyan
Journal:  Protein Sci       Date:  2021-10-23       Impact factor: 6.725

  2 in total

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