Literature DB >> 30048019

Fast and facile preparation of nanostructured silicon surfaces for laser desorption/ionization mass spectrometry of small compounds.

Abderrahmane Hamdi1,2,3, Christine Enjalbal4, Hervé Drobecq5, Rabah Boukherroub1, Oleg Melnyk5, Hatem Ezzaouia2, Yannick Coffinier1.   

Abstract

RATIONALE: Many important biological processes rely on specific biomarkers (such as metabolites, drugs, proteins or peptides, carbohydrates, lipids, ...) that need to be monitored in various fluids (blood, plasma, urine, cell cultures, tissue homogenates, …). Although mass spectrometry (MS) hyphenated to liquid chromatography (LC) is widely accepted as a 'gold-standard' method for identifying such synthetic chemicals or biological products, their robust fast sensitive detection from complex matrices still constitutes a highly challenging matter.
METHODS: In order to circumvent the constraints intrinsic to LC/MS technology in terms of prior sample treatment, analysis time and overall method development to optimize ionization efficiency affecting the detection threshold, we investigated laser desorption/ionization mass spectrometry (LDI-MS) by directly depositing the sample under study onto cheap inert nanostructures made of silicon to perform straightforward sensitive and rapid screening of targeted low mass biomarkers on a conventional MALDI platform.
RESULTS: The investigated silicon nanostructures were found to act as very efficient ion-promoting surfaces exhibiting high performance for the detection of different classes of organic compounds, including glutathione, glucose, peptides and antibiotics. Achieving such broad detection was compulsory to develop a SALDI-MS-based pre-screening tool.
CONCLUSIONS: The key contribution of the described analytical strategy consists of designing inert surfaces that are fast (minute preparation) and cheap to produce, easy to handle and able to detect small organic compounds in matrix-free LDI-MS prerequisite for biomarkers pre-screening from body fluids without the recourse of any separation step.
© 2018 John Wiley & Sons, Ltd.

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Year:  2018        PMID: 30048019     DOI: 10.1002/rcm.8245

Source DB:  PubMed          Journal:  Rapid Commun Mass Spectrom        ISSN: 0951-4198            Impact factor:   2.419


  19 in total

1.  Targeted data extraction of the MS/MS spectra generated by data-independent acquisition: a new concept for consistent and accurate proteome analysis.

Authors:  Ludovic C Gillet; Pedro Navarro; Stephen Tate; Hannes Röst; Nathalie Selevsek; Lukas Reiter; Ron Bonner; Ruedi Aebersold
Journal:  Mol Cell Proteomics       Date:  2012-01-18       Impact factor: 5.911

2.  Quantification of proteins by label-free LC-MS/MS.

Authors:  Yishai Levin; Sabine Bahn
Journal:  Methods Mol Biol       Date:  2010

3.  Automated approach for quantitative analysis of complex peptide mixtures from tandem mass spectra.

Authors:  John D Venable; Meng-Qiu Dong; James Wohlschlegel; Andrew Dillin; John R Yates
Journal:  Nat Methods       Date:  2004-09-29       Impact factor: 28.547

Review 4.  Mass spectrometry strategies in metabolomics.

Authors:  Zhentian Lei; David V Huhman; Lloyd W Sumner
Journal:  J Biol Chem       Date:  2011-06-01       Impact factor: 5.157

5.  High-performance isotope labeling for profiling carboxylic acid-containing metabolites in biofluids by mass spectrometry.

Authors:  Kevin Guo; Liang Li
Journal:  Anal Chem       Date:  2010-10-14       Impact factor: 6.986

6.  Stable-isotope dimethylation labeling combined with LC-ESI MS for quantification of amine-containing metabolites in biological samples.

Authors:  Kevin Guo; Chengjie Ji; Liang Li
Journal:  Anal Chem       Date:  2007-10-10       Impact factor: 6.986

7.  Differential 12C-/13C-isotope dansylation labeling and fast liquid chromatography/mass spectrometry for absolute and relative quantification of the metabolome.

Authors:  Kevin Guo; Liang Li
Journal:  Anal Chem       Date:  2009-05-15       Impact factor: 6.986

8.  Metabolomic database annotations via query of elemental compositions: mass accuracy is insufficient even at less than 1 ppm.

Authors:  Tobias Kind; Oliver Fiehn
Journal:  BMC Bioinformatics       Date:  2006-04-28       Impact factor: 3.169

9.  Seven Golden Rules for heuristic filtering of molecular formulas obtained by accurate mass spectrometry.

Authors:  Tobias Kind; Oliver Fiehn
Journal:  BMC Bioinformatics       Date:  2007-03-27       Impact factor: 3.169

10.  Conformational ordering of biomolecules in the gas phase: nitrogen collision cross sections measured on a prototype high resolution drift tube ion mobility-mass spectrometer.

Authors:  Jody C May; Cody R Goodwin; Nichole M Lareau; Katrina L Leaptrot; Caleb B Morris; Ruwan T Kurulugama; Alex Mordehai; Christian Klein; William Barry; Ed Darland; Gregor Overney; Kenneth Imatani; George C Stafford; John C Fjeldsted; John A McLean
Journal:  Anal Chem       Date:  2014-02-04       Impact factor: 6.986

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