Literature DB >> 21632543

Mass spectrometry strategies in metabolomics.

Zhentian Lei1, David V Huhman, Lloyd W Sumner.   

Abstract

MS has evolved as a critical component in metabolomics, which seeks to answer biological questions through large-scale qualitative and quantitative analyses of the metabolome. MS-based metabolomics techniques offer an excellent combination of sensitivity and selectivity, and they have become an indispensable platform in biology and metabolomics. In this minireview, various MS technologies used in metabolomics are briefly discussed, and future needs are suggested.

Mesh:

Year:  2011        PMID: 21632543      PMCID: PMC3138266          DOI: 10.1074/jbc.R111.238691

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  89 in total

1.  Resolution of 11,000 compositionally distinct components in a single electrospray ionization Fourier transform ion cyclotron resonance mass spectrum of crude oil.

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Review 2.  Systems biology, proteomics, and the future of health care: toward predictive, preventative, and personalized medicine.

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Journal:  J Proteome Res       Date:  2004 Mar-Apr       Impact factor: 4.466

3.  Comprehensive two-dimensional liquid chromatography applying two parallel columns in the second dimension.

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Journal:  J Chromatogr A       Date:  2007-11-17       Impact factor: 4.759

4.  Multiple ionization mass spectrometry strategy used to reveal the complexity of metabolomics.

Authors:  Anders Nordström; Elizabeth Want; Trent Northen; Janne Lehtiö; Gary Siuzdak
Journal:  Anal Chem       Date:  2007-12-18       Impact factor: 6.986

5.  Hydrophilic interaction chromatography for mass spectrometric metabonomic studies of urine.

Authors:  Simon Cubbon; Timothy Bradbury; Julie Wilson; Jane Thomas-Oates
Journal:  Anal Chem       Date:  2007-10-31       Impact factor: 6.986

6.  Desorption electrospray ionization imaging mass spectrometry of lipids in rat spinal cord.

Authors:  Marion Girod; Yunzhou Shi; Ji-Xin Cheng; R Graham Cooks
Journal:  J Am Soc Mass Spectrom       Date:  2010-03-28       Impact factor: 3.109

7.  Metabolic profiling of saponins in Medicago sativa and Medicago truncatula using HPLC coupled to an electrospray ion-trap mass spectrometer.

Authors:  David V Huhman; Lloyd W Sumner
Journal:  Phytochemistry       Date:  2002-02       Impact factor: 4.072

8.  Alterations in myocardial cardiolipin content and composition occur at the very earliest stages of diabetes: a shotgun lipidomics study.

Authors:  Xianlin Han; Jingyue Yang; Kui Yang; Zhongdan Zhao; Dana R Abendschein; Richard W Gross
Journal:  Biochemistry       Date:  2007-05-08       Impact factor: 3.162

Review 9.  Shotgun lipidomics of neutral lipids as an enabling technology for elucidation of lipid-related diseases.

Authors:  Richard W Gross; Xianlin Han
Journal:  Am J Physiol Endocrinol Metab       Date:  2009-01-06       Impact factor: 4.310

10.  Comprehensive two-dimensional gas chromatography with time-of-flight mass spectrometry detection: analysis of amino acid and organic acid trimethylsilyl derivatives, with application to the analysis of metabolites in rye grass samples.

Authors:  Janiece L Hope; Bryan J Prazen; Erik J Nilsson; Mary E Lidstrom; Robert E Synovec
Journal:  Talanta       Date:  2005-01-30       Impact factor: 6.057

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  116 in total

1.  New technologies for 21st century plant science.

Authors:  David W Ehrhardt; Wolf B Frommer
Journal:  Plant Cell       Date:  2012-02-24       Impact factor: 11.277

2.  PyMS: a Python toolkit for processing of gas chromatography-mass spectrometry (GC-MS) data. Application and comparative study of selected tools.

Authors:  Sean O'Callaghan; David P De Souza; Andrew Isaac; Qiao Wang; Luke Hodkinson; Moshe Olshansky; Tim Erwin; Bill Appelbe; Dedreia L Tull; Ute Roessner; Antony Bacic; Malcolm J McConville; Vladimir A Likić
Journal:  BMC Bioinformatics       Date:  2012-05-30       Impact factor: 3.169

Review 3.  Metabolomic signature of brain cancer.

Authors:  Renu Pandey; Laura Caflisch; Alessia Lodi; Andrew J Brenner; Stefano Tiziani
Journal:  Mol Carcinog       Date:  2017-07-17       Impact factor: 4.784

4.  Isotope Labeling-Assisted Evaluation of Hydrophilic and Hydrophobic Liquid Chromatograph-Mass Spectrometry for Metabolomics Profiling.

Authors:  Boer Xie; Yuanyuan Wang; Drew R Jones; Kaushik Kumar Dey; Xusheng Wang; Yuxin Li; Ji-Hoon Cho; Timothy I Shaw; Haiyan Tan; Junmin Peng
Journal:  Anal Chem       Date:  2018-06-25       Impact factor: 6.986

Review 5.  Mass Spectrometry-based Metabolomics in Translational Research.

Authors:  Su Jung Kim; Ha Eun Song; Hyo Yeong Lee; Hyun Ju Yoo
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

6.  Fast and facile preparation of nanostructured silicon surfaces for laser desorption/ionization mass spectrometry of small compounds.

Authors:  Abderrahmane Hamdi; Christine Enjalbal; Hervé Drobecq; Rabah Boukherroub; Oleg Melnyk; Hatem Ezzaouia; Yannick Coffinier
Journal:  Rapid Commun Mass Spectrom       Date:  2018-09-14       Impact factor: 2.419

Review 7.  Challenges in Identifying the Dark Molecules of Life.

Authors:  María Eugenia Monge; James N Dodds; Erin S Baker; Arthur S Edison; Facundo M Fernández
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2019-03-18       Impact factor: 10.745

8.  Discovery of new modules in metabolic biology using ChemoMetabolomics.

Authors:  Samuel Bocobza; Lothar Willmitzer; Natasha V Raikhel; Asaph Aharoni
Journal:  Plant Physiol       Date:  2012-09-06       Impact factor: 8.340

9.  Exploring the Process of Energy Generation in Pathophysiology by Targeted Metabolomics: Performance of a Simple and Quantitative Method.

Authors:  Marta Riera-Borrull; Esther Rodríguez-Gallego; Anna Hernández-Aguilera; Fedra Luciano; Rosa Ras; Elisabet Cuyàs; Jordi Camps; Antonio Segura-Carretero; Javier A Menendez; Jorge Joven; Salvador Fernández-Arroyo
Journal:  J Am Soc Mass Spectrom       Date:  2015-09-17       Impact factor: 3.109

10.  Globally Optimized Targeted Mass Spectrometry: Reliable Metabolomics Analysis with Broad Coverage.

Authors:  Haiwei Gu; Ping Zhang; Jiangjiang Zhu; Daniel Raftery
Journal:  Anal Chem       Date:  2015-12-02       Impact factor: 6.986

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