Literature DB >> 30040892

Transferability in Machine Learning for Electronic Structure via the Molecular Orbital Basis.

Matthew Welborn1, Lixue Cheng1, Thomas F Miller1.   

Abstract

We present a machine learning (ML) method for predicting electronic structure correlation energies using Hartree-Fock input. The total correlation energy is expressed in terms of individual and pair contributions from occupied molecular orbitals, and Gaussian process regression is used to predict these contributions from a feature set that is based on molecular orbital properties, such as Fock, Coulomb, and exchange matrix elements. With the aim of maximizing transferability across chemical systems and compactness of the feature set, we avoid the usual specification of ML features in terms of atom- or geometry-specific information, such atom/element-types, bond-types, or local molecular structure. ML predictions of MP2 and CCSD energies are presented for a range of systems, demonstrating that the method maintains accuracy while providing transferability both within and across chemical families; this includes predictions for molecules with atom-types and elements that are not included in the training set. The method holds promise both in its current form and as a proof-of-principle for the use of ML in the design of generalized density-matrix functionals.

Entities:  

Year:  2018        PMID: 30040892     DOI: 10.1021/acs.jctc.8b00636

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  16 in total

1.  Probing deoxysugar conformational preference: A comprehensive computational study investigating the effects of deoxygenation.

Authors:  Alison E Vickman; Nicola L B Pohl
Journal:  Carbohydr Res       Date:  2018-12-12       Impact factor: 2.104

2.  SAMPL6 logP challenge: machine learning and quantum mechanical approaches.

Authors:  Prajay Patel; David M Kuntz; Michael R Jones; Bernard R Brooks; Angela K Wilson
Journal:  J Comput Aided Mol Des       Date:  2020-01-30       Impact factor: 3.686

3.  Energy refinement and analysis of structures in the QM9 database via a highly accurate quantum chemical method.

Authors:  Hyungjun Kim; Ji Young Park; Sunghwan Choi
Journal:  Sci Data       Date:  2019-07-03       Impact factor: 6.444

4.  Informing geometric deep learning with electronic interactions to accelerate quantum chemistry.

Authors:  Zhuoran Qiao; Anders S Christensen; Matthew Welborn; Frederick R Manby; Anima Anandkumar; Thomas F Miller
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-28       Impact factor: 12.779

5.  Learning to Make Chemical Predictions: the Interplay of Feature Representation, Data, and Machine Learning Methods.

Authors:  Mojtaba Haghighatlari; Jie Li; Farnaz Heidar-Zadeh; Yuchen Liu; Xingyi Guan; Teresa Head-Gordon
Journal:  Chem       Date:  2020-06-16       Impact factor: 22.804

6.  Deep-neural-network solution of the electronic Schrödinger equation.

Authors:  Jan Hermann; Zeno Schätzle; Frank Noé
Journal:  Nat Chem       Date:  2020-09-23       Impact factor: 24.427

Review 7.  Ab Initio Machine Learning in Chemical Compound Space.

Authors:  Bing Huang; O Anatole von Lilienfeld
Journal:  Chem Rev       Date:  2021-08-13       Impact factor: 60.622

8.  Artificial Neural Networks as Mappings between Proton Potentials, Wave Functions, Densities, and Energy Levels.

Authors:  Maxim Secor; Alexander V Soudackov; Sharon Hammes-Schiffer
Journal:  J Phys Chem Lett       Date:  2021-02-25       Impact factor: 6.475

9.  Transferable Machine-Learning Model of the Electron Density.

Authors:  Andrea Grisafi; Alberto Fabrizio; Benjamin Meyer; David M Wilkins; Clemence Corminboeuf; Michele Ceriotti
Journal:  ACS Cent Sci       Date:  2018-12-26       Impact factor: 14.553

10.  Accurate and transferable multitask prediction of chemical properties with an atoms-in-molecules neural network.

Authors:  Roman Zubatyuk; Justin S Smith; Jerzy Leszczynski; Olexandr Isayev
Journal:  Sci Adv       Date:  2019-08-09       Impact factor: 14.136

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.