Literature DB >> 33630595

Artificial Neural Networks as Mappings between Proton Potentials, Wave Functions, Densities, and Energy Levels.

Maxim Secor1, Alexander V Soudackov1, Sharon Hammes-Schiffer1.   

Abstract

Artificial neural networks (ANNs) have become important in quantum chemistry. Herein, applications to nuclear quantum effects, such as zero-point energy, vibrationally excited states, and hydrogen tunneling, are explored. ANNs are used to solve the time-independent Schrödinger equation for single- and double-well potentials representing hydrogen-bonded molecular systems capable of proton transfer. ANN mappings are trained to predict the lowest five proton vibrational energies, wave functions, and densities from the proton potentials and to predict the excited state proton vibrational energies and densities from the proton ground state density. For the inverse problem, ANN mappings are trained to predict the proton potential from the proton vibrational energy levels or the proton ground state density. This latter mapping is theoretically justified by the first Hohenberg-Kohn theorem establishing a one-to-one correspondence between the external potential and the ground state density. ANNs for two- and three-dimensional systems are also presented to illustrate the straightforward extension to higher dimensions.

Entities:  

Year:  2021        PMID: 33630595      PMCID: PMC8021271          DOI: 10.1021/acs.jpclett.1c00229

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  17 in total

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Authors:  Simone Raugei; Michael L Klein
Journal:  J Am Chem Soc       Date:  2003-07-30       Impact factor: 15.419

Review 2.  Theory of coupled electron and proton transfer reactions.

Authors:  Sharon Hammes-Schiffer; Alexei A Stuchebrukhov
Journal:  Chem Rev       Date:  2010-11-04       Impact factor: 60.622

3.  On the Quantum Nature of the Shared Proton in Hydrogen Bonds

Authors: 
Journal:  Science       Date:  1997-02-07       Impact factor: 47.728

Review 4.  Hydrogen tunneling in enzymes and biomimetic models.

Authors:  Joshua P Layfield; Sharon Hammes-Schiffer
Journal:  Chem Rev       Date:  2013-12-20       Impact factor: 60.622

Review 5.  Deep learning for computational chemistry.

Authors:  Garrett B Goh; Nathan O Hodas; Abhinav Vishnu
Journal:  J Comput Chem       Date:  2017-03-08       Impact factor: 3.376

6.  Role of Intact Hydrogen-Bond Networks in Multiproton-Coupled Electron Transfer.

Authors:  Walter D Guerra; Emmanuel Odella; Maxim Secor; Joshua J Goings; María N Urrutia; Brian L Wadsworth; Miguel Gervaldo; Leónides E Sereno; Thomas A Moore; Gary F Moore; Sharon Hammes-Schiffer; Ana L Moore
Journal:  J Am Chem Soc       Date:  2020-12-18       Impact factor: 15.419

7.  Bypassing the Kohn-Sham equations with machine learning.

Authors:  Felix Brockherde; Leslie Vogt; Li Li; Mark E Tuckerman; Kieron Burke; Klaus-Robert Müller
Journal:  Nat Commun       Date:  2017-10-11       Impact factor: 14.919

8.  Transferable Machine-Learning Model of the Electron Density.

Authors:  Andrea Grisafi; Alberto Fabrizio; Benjamin Meyer; David M Wilkins; Clemence Corminboeuf; Michele Ceriotti
Journal:  ACS Cent Sci       Date:  2018-12-26       Impact factor: 14.553

9.  Unifying machine learning and quantum chemistry with a deep neural network for molecular wavefunctions.

Authors:  K T Schütt; M Gastegger; A Tkatchenko; K-R Müller; R J Maurer
Journal:  Nat Commun       Date:  2019-11-15       Impact factor: 14.919

10.  Electron density learning of non-covalent systems.

Authors:  Alberto Fabrizio; Andrea Grisafi; Benjamin Meyer; Michele Ceriotti; Clemence Corminboeuf
Journal:  Chem Sci       Date:  2019-09-09       Impact factor: 9.825

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  1 in total

Review 1.  Methodology-Centered Review of Molecular Modeling, Simulation, and Prediction of SARS-CoV-2.

Authors:  Kaifu Gao; Rui Wang; Jiahui Chen; Limei Cheng; Jaclyn Frishcosy; Yuta Huzumi; Yuchi Qiu; Tom Schluckbier; Xiaoqi Wei; Guo-Wei Wei
Journal:  Chem Rev       Date:  2022-05-20       Impact factor: 72.087

  1 in total

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