| Literature DB >> 30029679 |
Fabian P S Yu1, Samuel Amintas2, Thierry Levade3,4, Jeffrey A Medin5,6.
Abstract
Acid ceramidase (ACDase) deficiency is a spectrum of disorders that includes a rare lysosomal storage disorder called Farber disease (FD) and a rare epileptic disorder called spinal muscular atrophy with progressive myoclonic epilepsy (SMA-PME). Both disorders are caused by mutations in the ASAH1 gene that encodes the lysosomal hydrolase that breaks down the bioactive lipid ceramide. To date, there have been fewer than 200 reported cases of FD and SMA-PME in the literature. Typical textbook manifestations of classical FD include the formation of subcutaneous nodules, accumulation of joint contractures, and development of a hoarse voice. In reality, however, the clinical presentation is much broader. Patients may develop severe pathologies leading to death in infancy or may develop attenuated forms of the disorder wherein they are often misdiagnosed or not diagnosed until adulthood. A clinical variability also exists for SMA-PME, in which patients develop progressive muscle weakness and seizures. Currently, there is no known cure for FD or for SMA-PME. The main treatment is symptom management. In rare cases, treatment may include surgery or hematopoietic stem cell transplantation. Research using disease models has provided insights into the pathology as well as the role of ACDase in the development of these conditions. Recent studies have highlighted possible biomarkers for an effective diagnosis of ACDase deficiency. Ongoing work is being conducted to evaluate the use of recombinant human ACDase (rhACDase) for the treatment of FD. Finally, gene therapy strategies for the treatment of ACDase deficiency are actively being pursued. This review highlights the broad clinical definition and outlines key studies that have improved our understanding of inherited ACDase deficiency-related conditions.Entities:
Keywords: Ceramide; Lipid storage; Lipogranulomatosis; Lysosomal storage disorder; Lysosome; Metabolic disorder; Neuromuscular disease; SMA-PME; Sphingolipid; Sphingolipidosis; Spinal muscular atrophy
Mesh:
Substances:
Year: 2018 PMID: 30029679 PMCID: PMC6053731 DOI: 10.1186/s13023-018-0845-z
Source DB: PubMed Journal: Orphanet J Rare Dis ISSN: 1750-1172 Impact factor: 4.123
Cases Analyzed
| Cases mentioned in literature | Average age of onset | Average age of last documentation | Average age of death | |
|---|---|---|---|---|
| Classic & Severe FD | 102 | 5.8 ± 4.6 M (70) | 1.9 ± 1.8 Y (18) | 2.6 ± 6.0 Y (61) |
| Mild & Intermediate FD | 40 | 1.5 ± 1.4 Y (34) | 14.9 ± 18.1 Y (26) | 14.3 ± 8.1 Y (8) |
| FD (Unspecified) | 16 | – | – | – |
| SMA-PME | 23 | 5.8 ± 4.2 Y (18) | 16.5 ± 5.7 Y (15) | 14.4 ± 3.0 Y (5) |
| SMA-PME Like | 20 | 8.9 ± 7.38 (20) | 22.68 ± 17.8 Y (10) | 21.9 ± 17.2 Y (10) |
| Total FD | 158 | |||
| Total SMA-PME | 43 |
Total number of cases of ACDase deficiency reported from 1952 to 2018 by clinical presentation, severity, and average ages. Unspecified represents cases in which a diagnosis was made but insufficient clinical information was provided for placement in a clinical category. (See Additional file 1 for methodology). M months, Y years, number in brackets indicates the total number of cases included to calculate the average age and standard deviation
Main Clinical Features Present in Cases Related to ACDase Deficiency
| Variants | Cases with clinical details | Nodules | Joint contractures | Hoarse voice | Hepatosplenomegaly | Neurological and behavioral | Respiratory | Motor neuron/Muscle weakness | Ocular | Bone | Myoclonus & seizures |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Classic and Severe FD | 79 | 95% | 96% | 90% | 38% | 62% | 38% | 32% | 22% | 18% | 19% |
| Mild & Intermediate FD | 36 | 94% | 97% | 72% | 3% | 22% | 25% | 25% | 8% | 31% | 14% |
| SMA-PME | 20 | 0% | 0% | 0% | 0% | 60% | 45% | 100% | 0% | 0% | 100% |
| SMA-PME (like) | 19 | 0% | 0% | 0% | 0% | 32% | 26% | 95% | 0% | 0% | 100% |
Percentage representations of common clinical features in the literature for FD and the SMA-PME variant of ACDase deficiency
Fig. 1The typical clinical manifestations by organ type that have been reported in cases of Farber Disease (FD) and SMA-PME in the published literature. FD symptoms organized by neurological symptoms, ophthalmic symptoms, cardinal triad symptoms, respiratory symptoms, hematopoietic symptoms, gastrointestinal involvement, dermatological manifestations, liver disease, motor neuron and muscle weakness, and bone disease phenotypes
Fig. 2Reaction schema of the hydrolysis of ceramide by acid ceramidase into sphingosine and free fatty acid
Reported Mutations in ASAH1 that result in FD
| DNA Change | Mutation type | Locus | Amino acid change | Allelic status | ACDase activity | Number of cases | Reference |
|---|---|---|---|---|---|---|---|
| c.66G > C | Missense | Exon 1 | p.Q22H | NI | NI | 1 | [ |
| c.67C > G | Missense | Exon 1 | p.H23D | NI | NI | 1 | [ |
| c.92G > T | Missense | Exon 2 | p.C31F | Homoallelic | NI | 2 | [ |
| c.107A > G | Missense | Exon 2 | p.Y36C | Homoallelic & Heteroallelic | NI | 4 | [ |
| c.126-3941_382 + 1358del | Deletion | Exon 3–5 | p.Y42Rfs*10 | Heteroallelic | undetectable | 1 | [ |
| c.174_175InsC | Insertion | Exon 3 | p. E64* | Heteroallelic | NI | 1 | [ |
| c.212C > A | Missense | Exon 3 | p.P71Q | Heteroallelic | NI | 1 | [ |
| c.256_257insA | Insertion | Exon 4 | p.T86Nfs*13 | Heteroallelic | NI | 1 | [ |
| c.290_292delTGG | Deletion | Exon 4 | p.V96del | Homoallelic | 37% | 1 | [ |
| c.290 T > A | Missense | Exon 4 | p.V97E | Heteroallelic | 35% | 1 | [ |
| c.290 T > G | Missense | Exon 4 | p.V97G | Homoallelic | NI | 2 | [ |
| c.314 T > C | Missense | Exon 4 | p.L105P | Heteroallelic | NI | 1 | [ |
| c.383-16_383-12delTTTTC | Deletion | Intron 5 | – | Heteroallelic | NI | 1 | [ |
| c.372 T > A | Missense | Exon 6 | p.D124E | Heteroallelic | NI | 1 | [ |
| c.408 T > A | Missense | Exon 6 | p.F136L | Heteroallelic | NI | 1 | [ |
| c.412G > T | Deletion | Exon 6 | p.E139* | Heteroallelic | NI | 1 | [ |
| c.410A > G | Missense | Exon 6 | p.Y137C | Homoallelic | NI | 1 | [ |
| c.410_411delAT | Deletion | Exon 6 | p.Y137* | Heteroallelic | NI | 2 | [ |
| c.413A > T | Missense | Exon 6 | p.E138V | Homoallelic & Heteroallelic | < 5% | 5 | [ |
| c.457 + 4A > G | Splicing | Intron 6 | – | Homoallelic | NI | 2 | [ |
| c.502G > T | Missense | Exon 7 | p.G168W | Homoallelic | undetectable | 1 | [ |
| c.505 T > C | Missense | Exon 8 | p.W169R | Homoallelic & Heteroallelic | < 10% | 7 | [ |
| c.538G > A | Missense | Exon 8 | p.E180K | Heteroallelic | NI | 1 | [ |
| c.544C > G | Missense | Exon 8 | p.L182V | Homoallelic | NI | 4 | [ |
| c.593 T > C | Missense | Exon 8 | p.V198A | Heteroallelic | NI | 1 | [ |
| c.626G > A | Missense | Exon 8 | p.G209D | Heteroallelic | NI | 1 | [ |
| c.665C > A | Missense | Exon 9 | p.T222K | Homoallelic | < 5% | 1 | [ |
| c.677G > C | Missense | Exon 9 | p.R226P | Heteroallelic | NI | 1 | [ |
| c.703G > C | Missense | Exon 9 | p.G235A | Homoallelic & Heteroallelic | 2% | 3 | [ |
| c.704G > A | Missense | Exon 9 | p.G235D | Heteroallelic | NI | 1 | [ |
| c.704-2A > G | Splicing | Exon 9 | – | Homoallelic | NI | 1 | [ |
| c.760A > G | Missense | Exon 10 | p.R254G | Homoallelic & Heteroallelic | < 10% | 4 | [ |
| c.770 T > C | Missense | Exon 10 | p.L257P | Homoallelic | NI | 1 | [ |
| c.833C > T | Missense | Exon 11 | p.P278L | Homoallelic | NI | 2 | [ |
| c.917 + 4A > G | Splicing | Intron 11 | – | Heteroallelic | NI | 1 | [ |
| c.917 + 5G > A | Splicing | Intron 11 | – | Homoallelic | NI | 1 | [ |
| c.958A > G | Missense | Exon 12 | p.N320D | Homoallelic | < 15% | 1 | [ |
| c.959A > G | Missense | Exon 12 | p.N320S | Homoallelic | NI | 1 | [ |
| c.991G > A | Missense | Exon 12 | p.D331N | Heteroallelic | NI | 1 | [ |
| c.997C > T | Missense | Exon 12 | p.P333C | Homoallelic & Heteroallelic | NI | 3 | [ |
| c.997C > G | Missense | Exon 12 | p.P333G | Heteroallelic | NI | 4 | [ |
| c.998G > A | Missense | Exon 12 | p.P333H | Homoallelic | NI | 1 | [ |
| c.1085C > G | Missense | Exon 13 | p.P362R | Homoallelic | < 5% | 2 | [ |
| c.1084C > A | Missense | Exon 13 | p.P362T | Heteroallelic | NI | 1 | [ |
| c.1096A > C | Missense | Exon 13 | p.K366Q | Heteroallelic | NI | 2 | [ |
| c.1105G > A | Missense | Exon 13 | p.V369I | Heteroallelic | NI | 1 | [ |
| c.1098 + 1G > T | Splicing | Intron 13 | p.N348_K366del | Heteroallelic | NI | 1 | [ |
| c.1175A > G | Missense | Exon 14 | p.R254G | Heteroallelic | NI | 1 | [ |
| c.1186_1187insT | Insertion | Exon 14 | p.*396L | NI | NI | 1 | [ |
List of ASAH1 mutations reported in the literature that result in FD. Only pathogenic mutations are included. The number of cases column indicates any case in which one allele carries a mutation. Patients with compound mutations that are pathogenic are listed twice. The listed residual enzyme activity is expressed as a percent of the normal control; NI not indicated
Reported Mutations in ASAH1 that result in SMA-PME
| DNA Change | Mutation type | Locus | Amino acid change | Allelic status | ACDase activity | Number of cases | Reference |
|---|---|---|---|---|---|---|---|
| c.77C > G | Missense | Exon 1 | p.P26R | Heteroallelic | NI | 1 | [ |
| c.124A > G | Missense | Exon 2 | p.T42A | Homoallelic & Heteroallelic | < 10% | 4 | [ |
| c.125C > T | Missense | Exon 2 | p.T42M | Homoallelic | 32% | 12 | [ |
|
| Insertion | Intron 2 | – | Heteroallelic | NI | 2 | [ |
| c.177C > G | Nonsense | Exon 3 | p.Y59* | Heteroallelic | NI | 1 | [ |
| c.223_224insC | Insertion | Exon 3 | pV75Afs*6 | Heteroallelic | NI | 1 | [ |
| c.410A > G | Missense | Exon 6 | p.Y137C | Heteroallelic | NI | 1 | [ |
| c.456A > C | Missense | Exon 6 | p.K152N | Heteroallelic | < 20% | 5 | [ |
| c.518A > T | Missense | Exon 8 | p.N173I | Heteroallelic | < 10% | 1 | [ |
| c.536C > T | Missense | Exon 8 | p.T179I | Heteroallelic | NI | 3 | [ |
| c.594_599dupCTTCAA | Duplication | Exon 8 | F199_K200dup | Heteroallelic | < 10% | 1 | [ |
| c.850G > T | Nonsense | Exon 11 | p.G284X | Heteroallelic | < 10% | 1 | [ |
| c.886C > T | Missense | Exon 11 | p.R296X | Heteroallelic | < 20% | 1 | [ |
List of ASAH1 mutations reported in the literature that result in SMA-PME. Only pathogenic mutations are included. The number of cases column indicates any case in which one allele carries a mutation. Patients with compound mutations that are pathogenic are listed twice. The listed residual enzyme activity is expressed as a percent of the normal control; NI not indicated
Fig. 3Structure of the human ASAH1 gene with the protein and distribution of mutations. a ASAH1 genomic structure. b ASAH1 mature transcript structure. c Schematic of the ACDase protein with annotations for the signal peptide, α-subunit, and β-subunit. d Percentages of the reported 65 ASAH1 mutations by type for FD and SMA-PME. e Frequency of mutations by subunit and reported disease phenotype