Literature DB >> 30028642

Regulation of Neuronal Differentiation, Function, and Plasticity by Alternative Splicing.

Elisabetta Furlanis1, Peter Scheiffele1.   

Abstract

Posttranscriptional mechanisms provide powerful means to expand the coding power of genomes. In nervous systems, alternative splicing has emerged as a fundamental mechanism not only for the diversification of protein isoforms but also for the spatiotemporal control of transcripts. Thus, alternative splicing programs play instructive roles in the development of neuronal cell type-specific properties, neuronal growth, self-recognition, synapse specification, and neuronal network function. Here we discuss the most recent genome-wide efforts on mapping RNA codes and RNA-binding proteins for neuronal alternative splicing regulation. We illustrate how alternative splicing shapes key steps of neuronal development, neuronal maturation, and synaptic properties. Finally, we highlight efforts to dissect the spatiotemporal dynamics of alternative splicing and their potential contribution to neuronal plasticity and the mature nervous system.

Entities:  

Keywords:  RNA-binding proteins; cell identity; neuronal specification; recognition; splice code; synaptic plasticity

Mesh:

Substances:

Year:  2018        PMID: 30028642      PMCID: PMC6697533          DOI: 10.1146/annurev-cellbio-100617-062826

Source DB:  PubMed          Journal:  Annu Rev Cell Dev Biol        ISSN: 1081-0706            Impact factor:   13.827


  39 in total

1.  Developmental Attenuation of Neuronal Apoptosis by Neural-Specific Splicing of Bak1 Microexon.

Authors:  Lin Lin; Min Zhang; Peter Stoilov; Liang Chen; Sika Zheng
Journal:  Neuron       Date:  2020-07-24       Impact factor: 17.173

Review 2.  Alternative splicing of lncRNAs in human diseases.

Authors:  Jiaxi Chen; Yawen Liu; Jingyu Min; Huizhi Wang; Feifan Li; Chunhui Xu; Aihua Gong; Min Xu
Journal:  Am J Cancer Res       Date:  2021-03-01       Impact factor: 6.166

3.  A Sam68-dependent alternative splicing program shapes postsynaptic protein complexes.

Authors:  Harald Witte; Dietmar Schreiner; Peter Scheiffele
Journal:  Eur J Neurosci       Date:  2019-01-29       Impact factor: 3.386

4.  Pum2 and TDP-43 refine area-specific cytoarchitecture post-mitotically and modulate translation of Sox5, Bcl11b, and Rorb mRNAs in developing mouse neocortex.

Authors:  Melanie Richter; Nagammal Neelagandan; Kawssar Harb; Elia Magrinelli; Hend Harfoush; Katrin Kuechler; Melad Henis; Irm Hermanns-Borgmeyer; Froylan Calderon de Anda; Kent Duncan
Journal:  Elife       Date:  2022-03-09       Impact factor: 8.140

5.  Adhesion GPCR Latrophilin 3 regulates synaptic function of cone photoreceptors in a trans-synaptic manner.

Authors:  Yuchen Wang; Yan Cao; Cassandra L Hays; Thibaut Laboute; Thomas A Ray; Debbie Guerrero-Given; Abhimanyu S Ahuja; Dipak Patil; Olga Rivero; Naomi Kamasawa; Jeremy N Kay; Wallace B Thoreson; Kirill A Martemyanov
Journal:  Proc Natl Acad Sci U S A       Date:  2021-11-09       Impact factor: 11.205

6.  Functional Annotation of Custom Transcriptomes.

Authors:  Fursham Hamid; Kaur Alasoo; Jaak Vilo; Eugene Makeyev
Journal:  Methods Mol Biol       Date:  2022

7.  FACS-Based Neuronal Cell Type-Specific RNA Isolation and Alternative Splicing Analysis.

Authors:  Zicheng Wei; Yuxin Qin; Gordon Fishell; Boxing Li
Journal:  Methods Mol Biol       Date:  2022

8.  Single-cell transcriptomic analysis reveals the adverse effects of cadmium on the trajectory of neuronal maturation.

Authors:  Bo Song; Yuwei Zhang; Guiya Xiong; Huan Luo; Bing Zhang; Yixi Li; Zhibin Wang; Zhijun Zhou; Xiuli Chang
Journal:  Cell Biol Toxicol       Date:  2022-09-17       Impact factor: 6.819

Review 9.  Splicing regulation in brain and testis: common themes for highly specialized organs.

Authors:  Chiara Naro; Eleonora Cesari; Claudio Sette
Journal:  Cell Cycle       Date:  2021-02-26       Impact factor: 4.534

Review 10.  Neurexins: molecular codes for shaping neuronal synapses.

Authors:  Andrea M Gomez; Lisa Traunmüller; Peter Scheiffele
Journal:  Nat Rev Neurosci       Date:  2021-01-08       Impact factor: 34.870

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