Literature DB >> 30017185

Dialogue on the nomenclature and classification of prokaryotes.

Ramon Rosselló-Móra1, William B Whitman2.   

Abstract

The application of next generation sequencing and molecular ecology to the systematics and taxonomy of prokaryotes offers enormous insights into prokaryotic biology. This discussion explores some major disagreements but also considers the opportunities associated with the nomenclature of the uncultured taxa, the use of genome sequences as type material, the plurality of the nomenclatural code, and the roles of an official or computer-assisted taxonomy.
Copyright © 2018 Elsevier GmbH. All rights reserved.

Keywords:  Bacteriological code; Candidatus; Nomenclature; Taxonomy; Type material

Mesh:

Year:  2018        PMID: 30017185     DOI: 10.1016/j.syapm.2018.07.002

Source DB:  PubMed          Journal:  Syst Appl Microbiol        ISSN: 0723-2020            Impact factor:   4.022


  9 in total

1.  Proposal for Unification of the Genus Metakosakonia and the Genus Phytobacter to a Single Genus Phytobacter and Reclassification of Metakosakonia massiliensis as Phytobacter massiliensis comb. nov.

Authors:  Yuanyuan Ma; Rong Yao; Yuanyuan Li; Xiuqin Wu; Shuying Li; Qianli An
Journal:  Curr Microbiol       Date:  2020-04-30       Impact factor: 2.188

Review 2.  Taxonomically Characterized and Validated Bacterial Species Based on 16S rRNA Gene Sequences from India During the Last Decade.

Authors:  Princy Hira; Priya Singh; Anil Kumar Pinnaka; Suresh Korpole; Rup Lal
Journal:  Indian J Microbiol       Date:  2019-12-03       Impact factor: 2.461

Review 3.  Development of the SeqCode: A proposed nomenclatural code for uncultivated prokaryotes with DNA sequences as type.

Authors:  William B Whitman; Maria Chuvochina; Brian P Hedlund; Philip Hugenholtz; Konstantinos T Konstantinidis; Alison E Murray; Marike Palmer; Donovan H Parks; Alexander J Probst; Anna-Louise Reysenbach; Luis M Rodriguez-R; Ramon Rossello-Mora; Iain Sutcliffe; Stephanus N Venter
Journal:  Syst Appl Microbiol       Date:  2022-07-20       Impact factor: 4.064

4.  Effects of Habitat Partitioning on the Distribution of Bacterioplankton in Deep Lakes.

Authors:  Nico Salmaso
Journal:  Front Microbiol       Date:  2019-10-04       Impact factor: 5.640

5.  Harmonizing Prokaryotic Nomenclature: Fixing the Fuss over Phylum Name Flipping.

Authors:  Adyasha Panda; Salim T Islam; Gaurav Sharma
Journal:  mBio       Date:  2022-05-10       Impact factor: 7.786

6.  Editorial: Extremophiles: Microbial genomics and taxogenomics.

Authors:  Rafael R de la Haba; André Antunes; Brian P Hedlund
Journal:  Front Microbiol       Date:  2022-08-02       Impact factor: 6.064

Review 7.  Prokaryotic taxonomy and nomenclature in the age of big sequence data.

Authors:  Philip Hugenholtz; Maria Chuvochina; Aharon Oren; Donovan H Parks; Rochelle M Soo
Journal:  ISME J       Date:  2021-04-06       Impact factor: 10.302

8.  Exclusivity offers a sound yet practical species criterion for bacteria despite abundant gene flow.

Authors:  Erik S Wright; David A Baum
Journal:  BMC Genomics       Date:  2018-10-03       Impact factor: 3.969

9.  Pseudomonas glycinae sp. nov. isolated from the soybean rhizosphere.

Authors:  Jiayuan Jia; Xiaoqiang Wang; Peng Deng; Lin Ma; Sonya M Baird; Xiangdong Li; Shi-En Lu
Journal:  Microbiologyopen       Date:  2020-07-12       Impact factor: 3.139

  9 in total

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