Literature DB >> 32089574

Taxonomically Characterized and Validated Bacterial Species Based on 16S rRNA Gene Sequences from India During the Last Decade.

Princy Hira1, Priya Singh2, Anil Kumar Pinnaka3, Suresh Korpole3, Rup Lal4.   

Abstract

Microbial taxonomy dealing with identification and characterization of prokaryotes like bacteria and archaea has always been a major area of research all over the world. Exploring diversity of microbes and description of novel species with different genes and secondary compounds is of utmost importance for better future and sustenance of life. India having an enormous range of ecosystems and diverse species inhabiting these niches is considered to be one of the richest biodiversity regions of the world. During the last decade, with newer methodologies and better technology, the prokaryotic taxonomy from India has extended our inventory of microbial communities in specific niches. However, there still exist some limitations in classifying the microbes from India as compared to that is done world-over. This review enlists the taxonomic description of novel taxa of prokaryotes from India in the past decade. A total of 378 new bacterial species have been classified from different habitats in India in the last ten years and no descriptions of archaeal species is documented till date. © Association of Microbiologists of India 2019.

Keywords:  Classification; Indian biodiversity; Microbial taxonomy; Niches; Novel species

Year:  2019        PMID: 32089574      PMCID: PMC7000572          DOI: 10.1007/s12088-019-00845-7

Source DB:  PubMed          Journal:  Indian J Microbiol        ISSN: 0046-8991            Impact factor:   2.461


  94 in total

1.  Rapid and solitary production of mono-rhamnolipid biosurfactant and biofilm inhibiting pyocyanin by a taxonomic outlier Pseudomonas aeruginosa strain CR1.

Authors:  Utkarsh Sood; Durgesh Narain Singh; Princy Hira; Jung-Kul Lee; Vipin Chandra Kalia; Rup Lal; Mallikarjun Shakarad
Journal:  J Biotechnol       Date:  2019-11-06       Impact factor: 3.307

2.  Taxonomic use of DNA G+C content and DNA-DNA hybridization in the genomic age.

Authors:  Jan P Meier-Kolthoff; Hans-Peter Klenk; Markus Göker
Journal:  Int J Syst Evol Microbiol       Date:  2014-02       Impact factor: 2.747

3.  Ornithinimicrobium algicola sp. nov., a marine actinobacterium isolated from the green alga of the genus Ulva.

Authors:  E V V Ramaprasad; Ch Sasikala; Ch V Ramana
Journal:  Int J Syst Evol Microbiol       Date:  2015-09-18       Impact factor: 2.747

4.  Nocardioides solisilvae sp. nov., isolated from a forest soil.

Authors:  Vishnuvardhan Reddy Sultanpuram; Thirumala Mothe; Farooq Mohammed
Journal:  Antonie Van Leeuwenhoek       Date:  2015-04-19       Impact factor: 2.271

5.  Phylogenetic analyses of the genus Glaciecola: emended description of the genus Glaciecola, transfer of Glaciecola mesophila, G. agarilytica, G. aquimarina, G. arctica, G. chathamensis, G. polaris and G. psychrophila to the genus Paraglaciecola gen. nov. as Paraglaciecola mesophila comb. nov., P. agarilytica comb. nov., P. aquimarina comb. nov., P. arctica comb. nov., P. chathamensis comb. nov., P. polaris comb. nov. and P. psychrophila comb. nov., and description of Paraglaciecola oceanifecundans sp. nov., isolated from the Southern Ocean.

Authors:  Sisinthy Shivaji; Gundlapally Sathyanarayana Reddy
Journal:  Int J Syst Evol Microbiol       Date:  2014-06-30       Impact factor: 2.747

6.  Enterobacillus tribolii gen. nov., sp. nov., a novel member of the family Enterobacteriaceae, isolated from the gut of a red flour beetle, Tribolium castaneum.

Authors:  Vikas S Patil; Rahul C Salunkhe; Ravindra H Patil; C Husseneder; Yogesh S Shouche; V Venkata Ramana
Journal:  Antonie Van Leeuwenhoek       Date:  2015-02-26       Impact factor: 2.271

7.  Lacinutrix himadriensis sp. nov., a psychrophilic bacterium isolated from a marine sediment, and emended description of the genus Lacinutrix.

Authors:  T N R Srinivas; S Prasad; P Manasa; B Sailaja; Z Begum; S Shivaji
Journal:  Int J Syst Evol Microbiol       Date:  2012-05-04       Impact factor: 2.747

8.  TETRA: a web-service and a stand-alone program for the analysis and comparison of tetranucleotide usage patterns in DNA sequences.

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Journal:  BMC Bioinformatics       Date:  2004-10-26       Impact factor: 3.169

9.  TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy.

Authors:  Jan P Meier-Kolthoff; Markus Göker
Journal:  Nat Commun       Date:  2019-05-16       Impact factor: 14.919

10.  Complete ecological isolation and cryptic diversity in Polynucleobacter bacteria not resolved by 16S rRNA gene sequences.

Authors:  Martin W Hahn; Jitka Jezberová; Ulrike Koll; Tanja Saueressig-Beck; Johanna Schmidt
Journal:  ISME J       Date:  2016-03-04       Impact factor: 10.302

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