| Literature DB >> 30008619 |
Gabriela Fonseca-Camarillo1, Janette Furuzawa-Carballeda2, Jesús K Yamamoto-Furusho1, Andrea Sarmiento-Aguilar1, Rafael Barreto-Zuñiga3, Braulio Martínez-Benitez4, Montserrat A Lara-Velazquez5.
Abstract
BACKGROUND: The CARD family plays an important role in innate immune response by the activation of NF-κB. The aim of this study was to determine the gene expression and to enumerate the protein-expressing cells of some members of the CARD family (CARD9, CARD10, CARD11, CARD14 and CARD15) in patients with IBD and normal controls without colonic inflammation.Entities:
Keywords: CARD; Gene; Innate; PCR; Receptors; Ulcerative colitis
Year: 2018 PMID: 30008619 PMCID: PMC6042317 DOI: 10.1186/s12950-018-0189-4
Source DB: PubMed Journal: J Inflamm (Lond) ISSN: 1476-9255 Impact factor: 4.981
Demographic, clinical and laboratory variables of patients with UC and controls
| VARIABLES | ACTIVE UC ( | REMISSION UC ( | CROHN’S DISEASE ( | CONTROL GROUP ( |
|---|---|---|---|---|
| Age | ||||
| Mean ± SD (years) | 37.7 ± 10.5 | 39.0 ± 13.7 | 45.2 ± 19.7 | 47.7 ± 11.4 |
| Median | 38 | 35 | 41 | 52 |
| Range | 20–57 | 20–66 | 21–85 | 24–60 |
| Gender | ||||
| Female (%) | 13 (50) | 12 (55) | 2 (20) | 11 (61) |
| Male (%) | 13 (50) | 10 (45) | 8 (80) | 7 (39) |
| Clinical course | ||||
| Relapsing-remitting (%) | 80.7 | 22.7 | 0 | NA |
| Remission (%) | 15.3 | 77.2 | 87.5 | NA |
| Continuous activity (%) | 3.8 | 0 | 12.5 | NA |
| Extra intestinal manifestations (%) | 64 | 27.2 | 33 | NA |
| Disease duration | ||||
| Mean ± SD (years) | 6.03 ± 4.96 | 11.59 ± 6.7 | 7.2 ± 8.8 | NA |
| Median | 4.5 | 11.5 | 5.5 | NA |
| Range | 0–19 | 1–30 | 0–27 | NA |
| Treatment | ||||
| 5-aminosalycilates (%) | 38.5 | 54.5 | 50.0 | NA |
| 5-aminosalycilates + steroids (%) | 61.5 | 45.5 | 50.0 | NA |
| Steroid dependent (%) | 3.8 | 0.0 | 12.5 | NA |
| Steroid resistant (%) | 23.0 | 18.2 | 12.5 | NA |
| Histopathology severity | ||||
| Inactive disease (%) | 0 | 100 | 11 | NA |
| Mild (%) | 28 | 0 | 89 | NA |
| Moderate (%) | 24 | 0 | 0 | NA |
| Severe (%) | 48 | 0 | 0 | NA |
| Dysplasia (%) | 0 | 0 | 0 | NA |
| Laboratory values | ||||
| Hemoglobin (g/dL), Mean ± SD | 12.9 ± 2.9* | 14.3 ± 1.4 | 13.9 ± 2.1 | 14.8 ± 1.8 |
| Median | 13.6 | 14.6 | 14.4 | 14.9 |
| Range | 5.6–18.3 | 10.7–16.4 | 8.9–16.5 | 10.6–17.6 |
| Mean corpuscular volume (fL), Mean ± SD | 83.4 ± 8.1 | 88.5 ± 5.0 | 89.2 ± 7.3 | 90.2 ± 5.3 |
| Median | 85.2 | 89.0 | 91.4 | 91.1 |
| Range | 62.3–93.9 | 79.5–98.1 | 72.0–96.3 | 73.5–95.7 |
| Mean corpuscular hemoglobin (pg/cell), | ||||
| Mean ± SD | 27.5 ± 3.3 | 30.0 ± 2.2 | 30.2 ± 2.6 | 30. 7 ± 2.2 |
| Median | 28.5 | 30.4 | 30.4 | 31.2 |
| Range | 20.2–31.8 | 25.8–33.8 | 24.0–32.9 | 23.6–33.2 |
| Leukocytes (103/μL), Mean ± SD | 8.3 ± 2.5 | 6.8 ± 2.7 | 6.6 ± 3.1 | 7.0 ± 2.3 |
| Median | 8.6 | 6.2 | 5.5 | 6.6 |
| Range | 3.7–13.9 | 4.6–17.4 | 4.2–14.7 | 3.4–13.1 |
| Neutrophils (%), Mean ± SD | 62.5 ± 12.2 | 63.2 ± 8.5 | 70.5 ± 10.4 | 58.0 ± 9.7 |
| Median | 63.2 | 61.6 | 70.3 | 59.8 |
| Range | 35.0–85.0 | 46.6–81.2 | 53.4–91.0 | 39.4–75.6 |
| Lymphocytes (%), Mean ± SD | 26.5 ± 9.9 | 27.4 ± 8.3 | 20.5 ± 8.9 | 30.6 ± 9.4 |
| Median | 26.4 | 27.6 | 18.3 | 27.5 |
| Range | 10.0–44.0 | 14.8–44.5 | 6.6–35.4 | 15.2–50.5 |
| Monocytes (%), Mean ± SD Median | 7.9 ± 2.6 | 7.1 ± 2.2 | 7.9 ± 3.5 | 7.4 ± 1.8 |
| Median | 7.8 | 6.8 | 7.5 | 7.3 |
| Range | 3.9–12.8 | 2.5–11.1 | 1.8–14.5 | 3.7–11.0 |
| Platelets units 103/μL), Mean ± SD | 375.3 ± 142.0 | 238.0 ± 89.7 | 183.4 ± 58.1 | 212.2 ± 70.0 |
| Median | 371.0 | 229.0 | 187.0 | 207.0 |
| Range | 155.0–869.0 | 68.0–436.0 | 94.0–227.0 | 105.0–325.0 |
| Erythrocyte Sedimentation Rate (mm/h), | ||||
| Mean ± SD | 23.6 ± 18.8 | 13.1 ± 12.0 | 8.0 ± 6.9 | 3.5 ± 1.9 |
| Median | 17.5 | 11.0 | 4.0 | 3.0 |
| Range | 2.0–66.0 | 2.0–46.0 | 2.0 - 19.0 | 2.0–6.0 |
| Environmental exposure | ||||
| Tobacco (%) | 54.0 | 72.3 | 44.4 | 22.2 |
| Alcohol (%) | 35.0 | 31.8 | 22.2 | 16.6 |
| Comorbidities | ||||
| Allergies (%) | 3.8 | 9 | 0 | 16.6 |
| Autoimmune diseases (%) | 3.8 | 13.6 | 11.1 | 16.6 |
| Medical history | ||||
| Hypertension (%) | 0 | 4.5 | 0 | 22.2 |
| Overweight/obesity (%) | 0 | 0 | 0 | 5.5 |
| Diabetes (%) | 0 | 0 | 11.1 | 11.1 |
| Dyslipidemia (%) | 0 | 4.5 | 0 | 22.2 |
| Gynecologic diseases (%) | 3.8 | 18.1 | 0 | 16.6 |
| Surgery history (%) | 61.5 | 68.1 | 55.5 | 55.5 |
CD crohn’s disease, UC ulcerative colitis
Hemoglobin p = 0.018 (active ulcerative colitis vs. control group)
Mean corpuscular volume p = 0.008 (active ulcerative colitis vs. control group) and p = 0.048 (remission ulcerative colitis vs. control group) Neutrophils p < 0.001 (Crohn’s disease vs. control group)
Erythrocyte sedimentation rate p = 0.042 (active ulcerative colitis vs. control group) and p = 0.0498 (active ulcerative colitis vs. Crohn’s disease)
Non-parametrical tests were used such as U Mann Whitney test for numerical variables and Fisher Exact test for categorical variables
Primers designs used for Real Time Polymerase Chain Reaction (RT-PCR)
| GENE | GENEBANK | OLIGO LEFT | OLIGO RIGHT | UNIVERSAL PROBE LIBRARY | AMPLICON SIZE |
|---|---|---|---|---|---|
| CARD9 | NM_052814.3, NM_052813.4 | ggagacgctcgtcctgag | aggtcctgggggagtgag | 79 | gagacgctcgtcctgagctccgacctggaagatggctcacccaggaggtcccaggagctctcactcccccaggacct |
| CARD10 | NM_014550.3 | actaccccgaacacttcacg | gtcatcaagaattgggtcagg | 72 | actaccccgaacacttcacgctgctcacgggccaggaacccgcccagcgctgctccatgatcctcgatgaggaggggcctgagggcctgacccaattcttgatgac |
| CARD11 | NM_032415.4 | cagaggagctgcgagacaa | ggtgcttgtacatttcacagtcc | 1 | cagaggagctgcgagacaagtacctggaggagaaggaggacctggagctcaagtgctcgaccctgggaaaggactgtgaaatgtacaagcacc |
| CARD14 | NM_024110.3 | gagctcctagacacggcaga | cgagacatcaagccttccag | 71 | gagctcctagacacggcagaccttccgcagctggaaagcagcctgcagccagtctcccctggaaggcttgatgtctc |
| CARD15 | NM_022162.1 | gtgtcctcctcggacattct | ggaccctgagaccagcag | 36 | gtgtcctcctcggacattctccgggttgtgaaatgtgctcgcaggaggcttttcaggcacagaggagccagctggtcgagctgctggtctcagggtcc |
| GAPDH | NM_002046.3 | agccacatcgctcagaca | gcccaatacgaccaaatcc | 60 | agccacatcgctcagacaccatggggaaggtgaaggtcggagtcaacggatttggtcgtattgggc |
CARD9 assay was designed to detect both transcript isoforms (Universal Probe Library)
Fig. 1CARDs Gene Expression in Colonic Tissue of Ulcerative Colitis Patients. a CARD9; b CARD10; c CARD11; d CARD14; and e CARD15 relative gene expression quantified by RT-PCR. Bars show mean ± standard error of the mean of transcript levels in colonic mucosa from ulcerative colitis (UC) patients, active Crohn’s disease (CD) patients, and non-inflamed controls with GAPDH as housekeeping gene determined by 2-∆∆Ct. A non-parametric Kruskall Wallis test was used for analyze differences between groups
Fig. 2CARD9 and CARD14 protein expression in Colonic Tissue. Representative immunoperoxidase photomicrographs of non-inflamed control tissue, Ulcerative Colitis (UC) and Crohn’s disease (CD) colonic tissue. Orange arrowheads depict CARD9 immunoreactive cells in mucosa, submucosa muscular and serosa layer. Black arrows show CARD14-expressing cells. Original magnification was × 320. The statistical method used was one-way analysis of variance on ranks by Holm-Sidak method and Dunn’s test for all pairwise multiple comparison procedures
Fig. 3CARD15 protein expression in Colonic Tissue. Representative immunoperoxidase photomicrographs of non-inflamed control tissue, Ulcerative Colitis (UC) and Crohn’s disease (CD) colonic tissue. Orange arrowheads depict CARD15 immunoreactive cells in mucosa, submucosa muscular and serosa layer. Original magnification was × 320. The statistical method used was one-way analysis of variance on ranks by Holm-Sidak method and Dunn’s test for all pairwise multiple comparison procedures
Fig. 4CARDs relative percentage expression in Colonic Tissue of IBD patients. Percentage of a CARD9, b CARD14, and c CARD15-expressing cells in active ulcerative colitis (UC), active Crohn’s disease (CD) and non-inflamed colonic tissue. The statistical method used was one-way analysis of variance on ranks by Holm-Sidak method and Dunn’s test for all pairwise multiple comparison procedures