| Literature DB >> 29996007 |
Ching-Ping Tsai1,2, Hsiang-Jung Tsai2.
Abstract
BACKGROUND: Influenza B viruses (IBVs) have never been isolated from natural-infected pigs in clinical cases, although the susceptibility of domestic pigs to experimental IBV infections had been confirmed as well as IBV-specific antibodies were detected from pigs under natural and experimental conditions.Entities:
Keywords: Taiwan; Zoonosis; emerging disease; influenza virus; surveys; swine
Mesh:
Substances:
Year: 2018 PMID: 29996007 PMCID: PMC6304316 DOI: 10.1111/irv.12588
Source DB: PubMed Journal: Influenza Other Respir Viruses ISSN: 1750-2640 Impact factor: 4.380
Figure 1Molecular phylogenetic analyses of corresponding genes between swine and human strains of influenza B virus. Evolutionary analyses were conducted in MEGA7.17 In addition to corresponding genes of B/Lee/1940, B/Victoria/02/1987, B/Yamagata/16/1988, 4 vaccine strains recommended by WHO and implemented in Taiwan from 2009 through 2016 (Yam denotes Yamagata and Vic denotes Victoria),16 3 sIBVs (denoted as ▲) and one of the BLAST‐searched best‐matching viruses (denoted as ●), 122 HA genes (panel A), 151 NA genes (panel B), 31 PB1 genes (panel C), 31 PB2 genes (panel D) and 32 PA genes (panel E), 32 NP genes (panel F), 32 M genes (panel G) and 49 NS genes (panel H) of human IBVs isolated from 2009 through 2016 in Taiwan were involved, respectively. The numbers of nucleotide analyzed in corresponding genes are indicated on panels. The evolutionary history was inferred using the maximum‐likelihood method based on the Hasegawa‐Kishino‐Yano model with a gamma distribution (HKY + G) for HA genes and the Tamura 3‐parameter model with gamma distribution (T92 + G) for NA and 6 internal protein genes, respectively. Reliability of the tree topology was assessed by bootstrap analysis with 1000 replications.18 Only branches with bootstrap values >75% are indicated on phylogenetic trees. Scale bar indicates nucleotide substitutions per site. Accession numbers are listed in parentheses
Seropositivea cases on swine farms for swine strains of influenza B virus at prefecture level in Taiwan
| Year | Swine sera | Swine farm | Prefecture | |||
|---|---|---|---|---|---|---|
| +/Test | +% | +/Test | +% | +/Test | +% | |
| 2007 | 1/992 | 0.1 | 1/76 | 1.3 | 1/25 (Kinmen) | 4.0 |
| 2008 | 2/1290 | 0.2 | 2/69 | 2.9 | 2/14 (Pingtung, Tainan) | 14.3 |
| 2009 | 6/1695 | 0.4 | 5/108 | 4.6 | 4/18 [Yilan, Yunlin (2 townships), Chiayi, Pingtung] | 22.2 |
| 2010 | 6/2062 | 0.3 | 6/139 | 4.3 | 5/25 [Yunlin, Yilan (2 townships), Changhua, Kaohsiung, Tainan] | 20.0 |
| 2011 | 3/1490 | 0.2 | 3/95 | 3.2 | 3/16 (Yunlin, Chiayi, Tainan) | 18.8 |
| 2012 | 5/1388 | 0.4 | 4/91 | 4.4 | 4/16 (Pingtung, Chiayi, Yilan, Kaohsiung) | 25.0 |
| 2013 | 2/1359 | 0.1 | 2/88 | 2.3 | 2/16 (Yunlin, Changhua) | 12.5 |
| 2014 | 2/1309 | 0.2 | 2/87 | 2.3 | 2/18 (Tainan, Taitung) | 11.1 |
| 2015 | 0/1466 | 0 | 0/94 | 0 | 0/18 | 0 |
| 2016 | 4/1460 | 0.3 | 4/96 | 4.2 | 4/22 (Matsu, Tainan, Hualien, Yunlin) | 18.2 |
| 2017 | 0/1472 | 0 | 0/96 | 0 | 0/20 | 0 |
| Sum | 31/15 983 | 0.2 | 29/1039 | 2.8 | 11/25 | 44.0 |
A conservative HI cut‐off titer of 1:40 considered as positive for swine serum sample.14, 19 Swine farm recorded as positive when at least one of swine serum samples have 40 or more HI titers. All HI‐positive samples were further confirmed by the VN assays.