Literature DB >> 29994094

Precision Risk Analysis of Cancer Therapy with Interactive Nomograms and Survival Plots.

G Elisabeta Marai, Chihua Ma, Andrew Thomas Burks, Filippo Pellolio, Guadalupe Canahuate, David M Vock, Abdallah S R Mohamed, Clifton David Fuller.   

Abstract

We present the design and evaluation of an integrated problem solving environment for cancer therapy analysis. The environment intertwines a statistical martingale model and a K Nearest Neighbor approach with visual encodings, including novel interactive nomograms, in order to compute and explain a patient's probability of survival as a function of similar patient results. A coordinated views paradigm enables exploration of the multivariate, heterogeneous and few-valued data from a large head and neck cancer repository. A visual scaffolding approach further enables users to build from familiar representations to unfamiliar ones. Evaluation with domain experts show how this visualization approach and set of streamlined workflows enable the systematic and precise analysis of a patient prognosis in the context of cohorts of similar patients. We describe the design lessons learned from this successful, multi-site remote collaboration.

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Year:  2018        PMID: 29994094      PMCID: PMC6148410          DOI: 10.1109/TVCG.2018.2817557

Source DB:  PubMed          Journal:  IEEE Trans Vis Comput Graph        ISSN: 1077-2626            Impact factor:   4.579


  21 in total

1.  Multiple regions-of-interest analysis of setup uncertainties for head-and-neck cancer radiotherapy.

Authors:  Lifei Zhang; Adam S Garden; Justin Lo; K Kian Ang; Anesa Ahamad; William H Morrison; David I Rosenthal; Mark S Chambers; X Ronald Zhu; Radhe Mohan; Lei Dong
Journal:  Int J Radiat Oncol Biol Phys       Date:  2006-04-01       Impact factor: 7.038

2.  Radar plots: a useful way for presenting multivariate health care data.

Authors:  M Joan Saary
Journal:  J Clin Epidemiol       Date:  2008-04       Impact factor: 6.437

Review 3.  Molecular therapy in head and neck oncology.

Authors:  Jacques Bernier; Søren M Bentzen; Jan B Vermorken
Journal:  Nat Rev Clin Oncol       Date:  2009-05       Impact factor: 66.675

4.  Interactive visual analysis of heterogeneous cohort-study data.

Authors:  Paolo Angelelli; Steffen Oeltze; Judit Haász; Cagatay Turkay; Erlend Hodneland; Arvid Lundervold; Astri J Lundervold; Bernhard Preim; Helwig Hauser
Journal:  IEEE Comput Graph Appl       Date:  2014 Sep-Oct       Impact factor: 2.088

5.  GRACE: A visual comparison framework for integrated spatial and non-spatial geriatric data.

Authors:  Adrian Maries; Nathan Mays; Meganolson Hunt; Kim F Wong; William Layton; Robert Boudreau; Caterina Rosano; G Elisabeta Marai
Journal:  IEEE Trans Vis Comput Graph       Date:  2013-12       Impact factor: 4.579

6.  SU11248 maintenance therapy prevents tumor regrowth after fractionated irradiation of murine tumor models.

Authors:  Aaron J Schueneman; Eric Himmelfarb; Ling Geng; Jiahua Tan; Edwin Donnelly; Dirk Mendel; Gerald McMahon; Dennis E Hallahan
Journal:  Cancer Res       Date:  2003-07-15       Impact factor: 12.701

7.  SU11248 (sunitinib) sensitizes pancreatic cancer to the cytotoxic effects of ionizing radiation.

Authors:  Kyle C Cuneo; Ling Geng; Allie Fu; Darren Orton; Dennis E Hallahan; Anuradha Bapsi Chakravarthy
Journal:  Int J Radiat Oncol Biol Phys       Date:  2008-07-01       Impact factor: 7.038

Review 8.  New molecularly targeted therapies for lung cancer.

Authors:  Sophie Sun; Joan H Schiller; Monica Spinola; John D Minna
Journal:  J Clin Invest       Date:  2007-10       Impact factor: 14.808

9.  Visual analytics for epidemiologists: understanding the interactions between age, time, and disease with multi-panel graphs.

Authors:  Kenneth K H Chui; Julia B Wenger; Steven A Cohen; Elena N Naumova
Journal:  PLoS One       Date:  2011-02-15       Impact factor: 3.240

10.  OASIS: online application for the survival analysis of lifespan assays performed in aging research.

Authors:  Jae-Seong Yang; Hyun-Jun Nam; Mihwa Seo; Seong Kyu Han; Yonghwan Choi; Hong Gil Nam; Seung-Jae Lee; Sanguk Kim
Journal:  PLoS One       Date:  2011-08-15       Impact factor: 3.240

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  9 in total

1.  Cohort-based T-SSIM Visual Computing for Radiation Therapy Prediction and Exploration.

Authors:  A Wentzel; P Hanula; T Luciani; B Elgohari; H Elhalawani; G Canahuate; D Vock; C D Fuller; G E Marai
Journal:  IEEE Trans Vis Comput Graph       Date:  2019-08-22       Impact factor: 4.579

2.  Details-First, Show Context, Overview Last: Supporting Exploration of Viscous Fingers in Large-Scale Ensemble Simulations.

Authors:  Timothy Luciani; Andrew Burks; Cassiano Sugiyama; Jonathan Komperda; G Elisabeta Marai
Journal:  IEEE Trans Vis Comput Graph       Date:  2018-08-20       Impact factor: 4.579

3.  THALIS: Human-Machine Analysis of Longitudinal Symptoms in Cancer Therapy.

Authors:  Carla Floricel; Nafiul Nipu; Mikayla Biggs; Andrew Wentzel; Guadalupe Canahuate; Lisanne Van Dijk; Abdallah Mohamed; C David Fuller; G Elisabeta Marai
Journal:  IEEE Trans Vis Comput Graph       Date:  2021-12-24       Impact factor: 4.579

4.  A Tale of Two Centers: Visual Exploration of Health Disparities in Cancer Care.

Authors:  Sanjana Srabanti; Michael Tran; Virginie Achim; David Fuller; Guadalupe Canahuate; Fabio Miranda; G Elisabeta Marai
Journal:  IEEE Pac Vis Symp       Date:  2022-06-08

5.  Identifying Symptom Clusters Through Association Rule Mining.

Authors:  Mikayla Biggs; Carla Floricel; Lisanne Van Dijk; Abdallah S R Mohamed; C David Fuller; G Elisabeta Marai; Xinhua Zhang; Guadalupe Canahuate
Journal:  Artif Intell Med Conf Artif Intell Med (2005-)       Date:  2021-06-08

6.  Predicting late symptoms of head and neck cancer treatment using LSTM and patient reported outcomes.

Authors:  Yaohua Wang; Lisanne Van Dijk; Abdallah S R Mohamed; Clifton David Fuller; Xinhua Zhang; G Elisabeta Marai; Guadalupe Canahuate
Journal:  Proc Int Database Eng Appl Symp       Date:  2021-09-07

7.  Optimal Treatment Selection in Sequential Systemic and Locoregional Therapy of Oropharyngeal Squamous Carcinomas: Deep Q-Learning With a Patient-Physician Digital Twin Dyad.

Authors:  Elisa Tardini; Xinhua Zhang; Guadalupe Canahuate; Andrew Wentzel; Abdallah S R Mohamed; Lisanne Van Dijk; Clifton D Fuller; G Elisabeta Marai
Journal:  J Med Internet Res       Date:  2022-04-20       Impact factor: 7.076

8.  Precision association of lymphatic disease spread with radiation-associated toxicity in oropharyngeal squamous carcinomas.

Authors:  Andrew Wentzel; Timothy Luciani; Lisanne V van Dijk; Nicolette Taku; Baher Elgohari; Abdallah S R Mohamed; Guadalupe Canahuate; Clifton D Fuller; David M Vock; G Elisabeta Marai
Journal:  Radiother Oncol       Date:  2021-06-11       Impact factor: 6.901

9.  Oropharyngeal cancer patient stratification using random forest based-learning over high-dimensional radiomic features.

Authors:  Harsh Patel; David M Vock; G Elisabeta Marai; Clifton D Fuller; Abdallah S R Mohamed; Guadalupe Canahuate
Journal:  Sci Rep       Date:  2021-07-07       Impact factor: 4.379

  9 in total

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