Literature DB >> 29990673

FAN1 protects against repeat expansions in a Fragile X mouse model.

Xiao-Nan Zhao1, Karen Usdin2.   

Abstract

The Fragile X-related disorders (FXDs) are members of a large group of human neurological or neurodevelopmental conditions known as the Repeat Expansion Diseases. The mutation responsible for all of these diseases is an expansion in the size of a disease-specific tandem repeat tract. However, the underlying cause of this unusual mutation is unknown. Genome-wide association studies have identified single nucleotide polymorphisms (SNPs) in the vicinity of the FAN1 (MIM* 613534) gene that are associated with variations in the age at onset of a number of Repeat Expansion Diseases. FAN1 is a nuclease that has both 5'-3' exonuclease and 5' flap endonuclease activities. Here we show in a model for the FXDs that Fan1-/- mice have expansions that, in some tissues including brain, are 2-3 times as extensive as they are in Fan1+/+ mice. However, no effect of the loss of FAN1 was apparent for germ line expansions. Thus, FAN1 plays an important role in protecting against somatic expansions but is either not involved in protecting against intergenerational repeat expansions or is redundant with other related enzymes. However, since loss of FAN1 results in increased expansions in brain and other somatic tissue, FAN1 polymorphisms may be important disease modifiers in those Repeat Expansion Diseases in which somatic expansion contributes to age at onset or disease severity. Published by Elsevier B.V.

Entities:  

Keywords:  5′ flap endonuclease activity; 5′-3′ exonuclease activity; FMR1- related disorders (FMR1 disorders); FX-associated primary ovarian insufficiency (FXPOI); FX-associated tremor and ataxia syndrome (FXTAS); Fragile X syndrome (FXS); Mismatch repair; Repeat expansion

Mesh:

Substances:

Year:  2018        PMID: 29990673      PMCID: PMC6119480          DOI: 10.1016/j.dnarep.2018.07.001

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  36 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-29       Impact factor: 11.205

3.  Haploinsufficiency of yeast FEN1 causes instability of expanded CAG/CTG tracts in a length-dependent manner.

Authors:  Jiahui Yang; Catherine H Freudenreich
Journal:  Gene       Date:  2007-02-12       Impact factor: 3.688

4.  A genetic screen identifies FAN1, a Fanconi anemia-associated nuclease necessary for DNA interstrand crosslink repair.

Authors:  Agata Smogorzewska; Rohini Desetty; Takamune T Saito; Michael Schlabach; Francis P Lach; Mathew E Sowa; Alan B Clark; Thomas A Kunkel; J Wade Harper; Monica P Colaiácovo; Stephen J Elledge
Journal:  Mol Cell       Date:  2010-07-09       Impact factor: 17.970

5.  A FANCD2/FANCI-Associated Nuclease 1-Knockout Model Develops Karyomegalic Interstitial Nephritis.

Authors:  Rannar Airik; Markus Schueler; Merlin Airik; Jang Cho; Jonathan D Porath; Elina Mukherjee; Sunder Sims-Lucas; Friedhelm Hildebrandt
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6.  Identification of Genetic Factors that Modify Clinical Onset of Huntington's Disease.

Authors: 
Journal:  Cell       Date:  2015-07-30       Impact factor: 41.582

7.  Regional FMRP deficits and large repeat expansions into the full mutation range in a new Fragile X premutation mouse model.

Authors:  Ali Entezam; Rea Biacsi; Bonnie Orrison; Tapas Saha; Gloria E Hoffman; Ed Grabczyk; Robert L Nussbaum; Karen Usdin
Journal:  Gene       Date:  2007-03-16       Impact factor: 3.688

8.  FAN1 mutations cause karyomegalic interstitial nephritis, linking chronic kidney failure to defective DNA damage repair.

Authors:  Weibin Zhou; Edgar A Otto; Andrew Cluckey; Rannar Airik; Toby W Hurd; Moumita Chaki; Katrina Diaz; Francis P Lach; Geoffrey R Bennett; Heon Yung Gee; Amiya K Ghosh; Sivakumar Natarajan; Supawat Thongthip; Uma Veturi; Susan J Allen; Sabine Janssen; Gokul Ramaswami; Joanne Dixon; Felix Burkhalter; Martin Spoendlin; Holger Moch; Michael J Mihatsch; Jerome Verine; Richard Reade; Hany Soliman; Michel Godin; Denes Kiss; Guido Monga; Gianna Mazzucco; Kerstin Amann; Ferruh Artunc; Ronald C Newland; Thorsten Wiech; Stefan Zschiedrich; Tobias B Huber; Andreas Friedl; Gisela G Slaats; Jaap A Joles; Roel Goldschmeding; Joseph Washburn; Rachel H Giles; Shawn Levy; Agata Smogorzewska; Friedhelm Hildebrandt
Journal:  Nat Genet       Date:  2012-07-08       Impact factor: 38.330

9.  Fan1 deficiency results in DNA interstrand cross-link repair defects, enhanced tissue karyomegaly, and organ dysfunction.

Authors:  Supawat Thongthip; Marina Bellani; Siobhan Q Gregg; Sunandini Sridhar; Brooke A Conti; Yanglu Chen; Michael M Seidman; Agata Smogorzewska
Journal:  Genes Dev       Date:  2016-03-15       Impact factor: 11.361

10.  A MutSβ-Dependent Contribution of MutSα to Repeat Expansions in Fragile X Premutation Mice?

Authors:  Xiao-Nan Zhao; Rachel Lokanga; Kimaada Allette; Inbal Gazy; Di Wu; Karen Usdin
Journal:  PLoS Genet       Date:  2016-07-18       Impact factor: 5.917

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  27 in total

Review 1.  Modifiers of CAG/CTG Repeat Instability: Insights from Mammalian Models.

Authors:  Vanessa C Wheeler; Vincent Dion
Journal:  J Huntingtons Dis       Date:  2021

Review 2.  On the wrong DNA track: Molecular mechanisms of repeat-mediated genome instability.

Authors:  Alexandra N Khristich; Sergei M Mirkin
Journal:  J Biol Chem       Date:  2020-02-14       Impact factor: 5.157

3.  Genetic and Functional Analyses Point to FAN1 as the Source of Multiple Huntington Disease Modifier Effects.

Authors:  Kyung-Hee Kim; Eun Pyo Hong; Jun Wan Shin; Michael J Chao; Jacob Loupe; Tammy Gillis; Jayalakshmi S Mysore; Peter Holmans; Lesley Jones; Michael Orth; Darren G Monckton; Jeffrey D Long; Seung Kwak; Ramee Lee; James F Gusella; Marcy E MacDonald; Jong-Min Lee
Journal:  Am J Hum Genet       Date:  2020-06-25       Impact factor: 11.025

4.  FAN1's protection against CGG repeat expansion requires its nuclease activity and is FANCD2-independent.

Authors:  Xiaonan Zhao; Huiyan Lu; Karen Usdin
Journal:  Nucleic Acids Res       Date:  2021-11-18       Impact factor: 16.971

5.  R-loops promote trinucleotide repeat deletion through DNA base excision repair enzymatic activities.

Authors:  Eduardo E Laverde; Yanhao Lai; Fenfei Leng; Lata Balakrishnan; Catherine H Freudenreich; Yuan Liu
Journal:  J Biol Chem       Date:  2020-08-06       Impact factor: 5.157

6.  Variation in DNA Repair System Gene as an Additional Modifier of Age at Onset in Spinocerebellar Ataxia Type 3/Machado-Joseph Disease.

Authors:  Rafaella Mergener; Gabriel Vasata Furtado; Eduardo Preusser de Mattos; Vanessa Bielefeldt Leotti; Laura Bannach Jardim; Maria Luiza Saraiva-Pereira
Journal:  Neuromolecular Med       Date:  2019-10-05       Impact factor: 3.843

Review 7.  Structure-forming repeats and their impact on genome stability.

Authors:  Rebecca E Brown; Catherine H Freudenreich
Journal:  Curr Opin Genet Dev       Date:  2020-12-03       Impact factor: 5.578

8.  Special Issue: DNA Repair and Somatic Repeat Expansion in Huntington's Disease.

Authors:  Lesley Jones; Vanessa C Wheeler; Christopher E Pearson
Journal:  J Huntingtons Dis       Date:  2021

9.  Isolation and Analysis of the CGG-Repeat Size in Male and Female Gametes from a Fragile X Mouse Model.

Authors:  Xiaonan Zhao; Huiyan Lu; Pradeep K Dagur; Karen Usdin
Journal:  Methods Mol Biol       Date:  2020

Review 10.  Huntington disease: new insights into molecular pathogenesis and therapeutic opportunities.

Authors:  Sarah J Tabrizi; Michael D Flower; Christopher A Ross; Edward J Wild
Journal:  Nat Rev Neurol       Date:  2020-08-14       Impact factor: 42.937

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