Literature DB >> 29978187

Prevalence of Germline Mutations in Cancer Susceptibility Genes in Patients With Advanced Renal Cell Carcinoma.

Maria I Carlo1, Semanti Mukherjee1,2, Diana Mandelker3, Joseph Vijai1,2, Yelena Kemel2, Liying Zhang3, Andrea Knezevic4, Sujata Patil4, Ozge Ceyhan-Birsoy3, Kuo-Cheng Huang3, Almedina Redzematovic1, Devyn T Coskey1, Carolyn Stewart1, Nisha Pradhan1, Angela G Arnold1, A Ari Hakimi5, Ying-Bei Chen3, Jonathan A Coleman5, David M Hyman1, Marc Ladanyi3, Karen A Cadoo1, Michael F Walsh1, Zsofia K Stadler1, Chung-Han Lee1, Darren R Feldman1, Martin H Voss1, Mark Robson1, Robert J Motzer1, Kenneth Offit1,2.   

Abstract

Importance: Identification of patients with hereditary renal cell carcinoma (RCC) is important for cancer screening and, in patients with advanced disease, for guiding treatment. The prevalence of cancer-related germline mutations in patients with advanced RCC and the phenotypes associated with some rare mutations are unknown.
Objectives: To examine the prevalence of germline mutations in both known RCC predisposition genes and other cancer-associated genes and to identify clinical and pathologic factors associated with germline mutations. Design, Setting, and Participants: In this cohort study conducted from October 1, 2015, to July 31, 2017, 254 of 267 patients with advanced (American Joint Committee on Cancer stage III or IV) RCC who were seen in medical oncology or urology clinics agreed to germline sequencing and disclosure of results under an institutional protocol of matched tumor-germline DNA sequencing. Main Outcomes and Measures: Mutation prevalence and spectrum in patients with advanced RCC were determined. Clinical characteristics were assessed by mutation status.
Results: Of the 254 patients (median age [range], 56 [13-79] years; 179 [70.5%] male; 211 [83.1%] non-Hispanic white), germline mutations were identified in 41 (16.1%); 14 (5.5%) had mutations in syndromic RCC-associated genes (7 in FH, 3 in BAP1, and 1 each in VHL, MET, SDHA, and SDHB). The most frequent mutations were CHEK2 (n = 9) and FH (n = 7). Of genes not previously associated with RCC risk, CHEK2 was overrepresented in patients compared with the general population, with an odds ratio of RCC of 3.0 (95% CI, 1.3-5.8; P = .003). Patients with non-clear cell RCC were significantly more likely to have an RCC-associated gene mutation (9 [11.7%] of 74 vs 3 [1.7%] of 177; P = .001), and 8 (10.0%) had a mutation in a gene that could guide therapy. Of patients with mutations in RCC-associated genes, 5 (35.7%) failed to meet current clinical guidelines for genetic testing. Conclusions and Relevance: Of patients with non-clear cell RCC, more than 20% had a germline mutation, of which half had the potential to direct systemic therapy. Current referral criteria for genetic testing did not identify a substantial portion of patients with mutations, supporting the role of a more inclusive sequencing approach.

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Mesh:

Year:  2018        PMID: 29978187      PMCID: PMC6584283          DOI: 10.1001/jamaoncol.2018.1986

Source DB:  PubMed          Journal:  JAMA Oncol        ISSN: 2374-2437            Impact factor:   31.777


  43 in total

1.  Familial renal carcinoma: clinical evaluation, clinical subtypes and risk of renal carcinoma development.

Authors:  Berton Zbar; Gladys Glenn; Maria Merino; Lindsay Middelton; James Peterson; Jorge Toro; Jonathan Coleman; Peter Pinto; Laura S Schmidt; Peter Choyke; W Marston Linehan
Journal:  J Urol       Date:  2007-02       Impact factor: 7.450

2.  FACETS: allele-specific copy number and clonal heterogeneity analysis tool for high-throughput DNA sequencing.

Authors:  Ronglai Shen; Venkatraman E Seshan
Journal:  Nucleic Acids Res       Date:  2016-06-07       Impact factor: 16.971

Review 3.  Hereditary leiomyomatosis and renal cell cancer syndrome: An update and review.

Authors:  Viral M Patel; Marc Z Handler; Robert A Schwartz; W Clark Lambert
Journal:  J Am Acad Dermatol       Date:  2017-03-14       Impact factor: 11.527

4.  Advances in the diagnosis of hereditary kidney cancer: Initial results of a multigene panel test.

Authors:  Kevin A Nguyen; Jamil S Syed; Carin R Espenschied; Holly LaDuca; Ansh M Bhagat; Alfredo Suarez-Sarmiento; Timothy K O'Rourke; Karina L Brierley; Erin W Hofstatter; Brian Shuch
Journal:  Cancer       Date:  2017-08-08       Impact factor: 6.860

5.  Adverse outcomes in clear cell renal cell carcinoma with mutations of 3p21 epigenetic regulators BAP1 and SETD2: a report by MSKCC and the KIRC TCGA research network.

Authors:  A Ari Hakimi; Irina Ostrovnaya; Boris Reva; Nikolaus Schultz; Ying-Bei Chen; Mithat Gonen; Han Liu; Shugaku Takeda; Martin H Voss; Satish K Tickoo; Victor E Reuter; Paul Russo; Emily H Cheng; Chris Sander; Robert J Motzer; James J Hsieh
Journal:  Clin Cancer Res       Date:  2013-04-25       Impact factor: 12.531

6.  Genetic and functional analyses of FH mutations in multiple cutaneous and uterine leiomyomatosis, hereditary leiomyomatosis and renal cancer, and fumarate hydratase deficiency.

Authors:  N A Alam; A J Rowan; N C Wortham; P J Pollard; M Mitchell; J P Tyrer; E Barclay; E Calonje; S Manek; S J Adams; P W Bowers; N P Burrows; R Charles-Holmes; L J Cook; B M Daly; G P Ford; L C Fuller; S E Hadfield-Jones; N Hardwick; A S Highet; M Keefe; S P MacDonald-Hull; E D A Potts; M Crone; S Wilkinson; F Camacho-Martinez; S Jablonska; R Ratnavel; A MacDonald; R J Mann; K Grice; G Guillet; M S Lewis-Jones; H McGrath; D C Seukeran; P J Morrison; S Fleming; S Rahman; D Kelsell; I Leigh; S Olpin; I P M Tomlinson
Journal:  Hum Mol Genet       Date:  2003-06-01       Impact factor: 6.150

Review 7.  The CHEK2 I157T variant and breast cancer susceptibility: a systematic review and meta-analysis.

Authors:  Chuan Liu; Ying Wang; Qing-Shui Wang; Ya-Jie Wang
Journal:  Asian Pac J Cancer Prev       Date:  2012

8.  Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Authors:  Sue Richards; Nazneen Aziz; Sherri Bale; David Bick; Soma Das; Julie Gastier-Foster; Wayne W Grody; Madhuri Hegde; Elaine Lyon; Elaine Spector; Karl Voelkerding; Heidi L Rehm
Journal:  Genet Med       Date:  2015-03-05       Impact factor: 8.822

9.  Mutational landscape of metastatic cancer revealed from prospective clinical sequencing of 10,000 patients.

Authors:  Ahmet Zehir; Ryma Benayed; Ronak H Shah; Aijazuddin Syed; Sumit Middha; Hyunjae R Kim; Preethi Srinivasan; Jianjiong Gao; Debyani Chakravarty; Sean M Devlin; Matthew D Hellmann; David A Barron; Alison M Schram; Meera Hameed; Snjezana Dogan; Dara S Ross; Jaclyn F Hechtman; Deborah F DeLair; JinJuan Yao; Diana L Mandelker; Donavan T Cheng; Raghu Chandramohan; Abhinita S Mohanty; Ryan N Ptashkin; Gowtham Jayakumaran; Meera Prasad; Mustafa H Syed; Anoop Balakrishnan Rema; Zhen Y Liu; Khedoudja Nafa; Laetitia Borsu; Justyna Sadowska; Jacklyn Casanova; Ruben Bacares; Iwona J Kiecka; Anna Razumova; Julie B Son; Lisa Stewart; Tessara Baldi; Kerry A Mullaney; Hikmat Al-Ahmadie; Efsevia Vakiani; Adam A Abeshouse; Alexander V Penson; Philip Jonsson; Niedzica Camacho; Matthew T Chang; Helen H Won; Benjamin E Gross; Ritika Kundra; Zachary J Heins; Hsiao-Wei Chen; Sarah Phillips; Hongxin Zhang; Jiaojiao Wang; Angelica Ochoa; Jonathan Wills; Michael Eubank; Stacy B Thomas; Stuart M Gardos; Dalicia N Reales; Jesse Galle; Robert Durany; Roy Cambria; Wassim Abida; Andrea Cercek; Darren R Feldman; Mrinal M Gounder; A Ari Hakimi; James J Harding; Gopa Iyer; Yelena Y Janjigian; Emmet J Jordan; Ciara M Kelly; Maeve A Lowery; Luc G T Morris; Antonio M Omuro; Nitya Raj; Pedram Razavi; Alexander N Shoushtari; Neerav Shukla; Tara E Soumerai; Anna M Varghese; Rona Yaeger; Jonathan Coleman; Bernard Bochner; Gregory J Riely; Leonard B Saltz; Howard I Scher; Paul J Sabbatini; Mark E Robson; David S Klimstra; Barry S Taylor; Jose Baselga; Nikolaus Schultz; David M Hyman; Maria E Arcila; David B Solit; Marc Ladanyi; Michael F Berger
Journal:  Nat Med       Date:  2017-05-08       Impact factor: 53.440

10.  Integrative clinical genomics of metastatic cancer.

Authors:  Dan R Robinson; Yi-Mi Wu; Robert J Lonigro; Pankaj Vats; Erin Cobain; Jessica Everett; Xuhong Cao; Erica Rabban; Chandan Kumar-Sinha; Victoria Raymond; Scott Schuetze; Ajjai Alva; Javed Siddiqui; Rashmi Chugh; Francis Worden; Mark M Zalupski; Jeffrey Innis; Rajen J Mody; Scott A Tomlins; David Lucas; Laurence H Baker; Nithya Ramnath; Ann F Schott; Daniel F Hayes; Joseph Vijai; Kenneth Offit; Elena M Stoffel; J Scott Roberts; David C Smith; Lakshmi P Kunju; Moshe Talpaz; Marcin Cieślik; Arul M Chinnaiyan
Journal:  Nature       Date:  2017-08-02       Impact factor: 49.962

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  36 in total

1.  Familial Kidney Cancer: Implications of New Syndromes and Molecular Insights.

Authors:  Maria I Carlo; A Ari Hakimi; Grant D Stewart; Gennady Bratslavsky; James Brugarolas; Ying-Bei Chen; W Marston Linehan; Eamonn R Maher; Maria J Merino; Kenneth Offit; Victor E Reuter; Brian Shuch; Jonathan A Coleman
Journal:  Eur Urol       Date:  2019-07-18       Impact factor: 20.096

Review 2.  Imaging for Screening and Surveillance of Patients with Hereditary Forms of Renal Cell Carcinoma.

Authors:  Yuval Freifeld; Lakshmi Ananthakrishnan; Vitaly Margulis
Journal:  Curr Urol Rep       Date:  2018-08-16       Impact factor: 3.092

3.  Patterns of progression in patients treated for immuno-oncology antibodies combination.

Authors:  Alice Bernard-Tessier; Capucine Baldini; Eduardo Castanon; Patricia Martin; Stéphane Champiat; Antoine Hollebecque; Sophie Postel-Vinay; Andreea Varga; Rastilav Bahleda; Anas Gazzah; Jean-Marie Michot; Vincent Ribrag; Jean-Pierre Armand; Aurélien Marabelle; Jean-Charles Soria; Christophe Massard; Samy Ammari
Journal:  Cancer Immunol Immunother       Date:  2020-07-22       Impact factor: 6.968

4.  Clinical Applications of Next-Generation Sequencing in Precision Oncology.

Authors:  Chris A Karlovich; P Mickey Williams
Journal:  Cancer J       Date:  2019 Jul/Aug       Impact factor: 3.360

5.  Germline Variants Identified in Patients with Early-onset Renal Cell Carcinoma Referred for Germline Genetic Testing.

Authors:  Hong Truong; Rania Sheikh; Ritesh Kotecha; Yelena Kemel; Peter A Reisz; Andrew T Lenis; Nikita N Mehta; Aliya Khurram; Vijai Joseph; Diana Mandelker; Alicia Latham; Ozge Ceyhan-Birsoy; Marc Ladanyi; Neil J Shah; Michael F Walsh; Martin H Voss; Chung-Han Lee; Paul Russo; Jonathan A Coleman; A Ari Hakimi; Darren R Feldman; Zsofia K Stadler; Mark E Robson; Robert J Motzer; Kenneth Offit; Sujata Patil; Maria I Carlo
Journal:  Eur Urol Oncol       Date:  2021-10-12

6.  Differences in Cancer Phenotypes Among Frequent CHEK2 Variants and Implications for Clinical Care-Checking CHEK2.

Authors:  Brittany L Bychkovsky; Nihat B Agaoglu; Carolyn Horton; Jing Zhou; Amal Yussuf; Parichehr Hemyari; Marcy E Richardson; Colin Young; Holly LaDuca; Deborah L McGuinness; Rochelle Scheib; Judy E Garber; Huma Q Rana
Journal:  JAMA Oncol       Date:  2022-09-22       Impact factor: 33.006

7.  Growth Rates of Genetically Defined Renal Tumors: Implications for Active Surveillance and Intervention.

Authors:  Mark W Ball; Julie Y An; Patrick T Gomella; Rabindra Gautam; Christopher J Ricketts; Cathy D Vocke; Laura S Schmidt; Maria J Merino; Ramaprasad Srinivasan; Ashkan A Malayeri; Adam R Metwalli; W Marston Linehan
Journal:  J Clin Oncol       Date:  2020-02-21       Impact factor: 44.544

8.  Molecular characterization of localized pleural mesothelioma.

Authors:  Yin P Hung; Fei Dong; Adrian M Dubuc; Paola Dal Cin; Raphael Bueno; Lucian R Chirieac
Journal:  Mod Pathol       Date:  2019-08-01       Impact factor: 7.842

Review 9.  Evolving Significance of Tumor-Normal Sequencing in Cancer Care.

Authors:  Diana Mandelker; Ozge Ceyhan-Birsoy
Journal:  Trends Cancer       Date:  2019-12-10

10.  Genetic risk assessment for hereditary renal cell carcinoma: Clinical consensus statement.

Authors:  Gennady Bratslavsky; Neil Mendhiratta; Michael Daneshvar; James Brugarolas; Mark W Ball; Adam Metwalli; Katherine L Nathanson; Phillip M Pierorazio; Ronald S Boris; Eric A Singer; Maria I Carlo; Mary B Daly; Elizabeth P Henske; Colette Hyatt; Lindsay Middleton; Gloria Morris; Anhyo Jeong; Vivek Narayan; W Kimryn Rathmell; Ulka Vaishampayan; Bruce H Lee; Dena Battle; Michael J Hall; Khaled Hafez; Michael A S Jewett; Christina Karamboulas; Sumanta K Pal; A Ari Hakimi; Alexander Kutikov; Othon Iliopoulos; W Marston Linehan; Eric Jonasch; Ramaprasad Srinivasan; Brian Shuch
Journal:  Cancer       Date:  2021-08-03       Impact factor: 6.860

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