Literature DB >> 34654685

Germline Variants Identified in Patients with Early-onset Renal Cell Carcinoma Referred for Germline Genetic Testing.

Hong Truong1, Rania Sheikh2, Ritesh Kotecha3, Yelena Kemel4, Peter A Reisz1, Andrew T Lenis1, Nikita N Mehta5, Aliya Khurram3, Vijai Joseph4, Diana Mandelker5, Alicia Latham2, Ozge Ceyhan-Birsoy6, Marc Ladanyi5, Neil J Shah3, Michael F Walsh7, Martin H Voss3, Chung-Han Lee3, Paul Russo1, Jonathan A Coleman1, A Ari Hakimi1, Darren R Feldman3, Zsofia K Stadler8, Mark E Robson9, Robert J Motzer3, Kenneth Offit9, Sujata Patil10, Maria I Carlo11.   

Abstract

BACKGROUND: Despite guidelines recommending genetic counseling for patients with early-onset renal cell carcinoma (RCC), studies interrogating the spectrum of germline mutations and clinical associations in patients with early-onset RCC are lacking.
OBJECTIVE: To define the germline genetic spectrum and clinical associations for patients with early-onset RCC diagnosed at age ≤46 yr who underwent genetic testing. DESIGN, SETTING, AND PARTICIPANTS: We retrospectively identified patients with early-onset RCC who underwent germline testing at our institution from February 2003 to June 2020. OUTCOME MEASUREMENT AND STATISTICAL ANALYSIS: The frequency and spectrum of pathogenic/likely pathogenic (P/LP) variants were determined. Clinical characteristics associated with mutation status were analyzed using two-sample comparison (Fisher's exact or χ2 test). RESULTS AND LIMITATIONS: Of 232 patients with early-onset RCC, 50% had non-clear-cell histology, including unclassified RCC (12.1%), chromophobe RCC (9.7%), FH-deficient RCC (7.0%), papillary RCC (6.6%), and translocation-associated RCC (4.3%). Overall, 43.5% had metastatic disease. Germline P/LP variants were identified in 41 patients (17.7%), of which 21 (9.1%) were in an RCC-associated gene and 20 (8.6%) in a non-RCC-associated gene, including 17 (7.3%) in DNA damage repair genes such as BRCA1/2, ATM, and CHEK2. Factors associated with RCC P/LP variants include bilateral/multifocal renal tumors, non-clear-cell histology, and additional extrarenal primary malignancies. In patients with only a solitary clear-cell RCC, the prevalence of P/LP variants in RCC-associated and non-RCC-associated genes was 0% and 9.9%, respectively.
CONCLUSIONS: Patients with early-onset RCC had high frequencies of germline P/LP variants in genes associated with both hereditary RCC and other cancer predispositions. Germline RCC panel testing has the highest yield when patients have clinical phenotypes suggestive of underlying RCC gene mutations. Patients with early-onset RCC should undergo comprehensive assessment of personal and family history to guide appropriate genetic testing. PATIENT
SUMMARY: In this study of 232 patients with early-onset kidney cancer who underwent genetic testing, we found a high prevalence of mutations in genes that increase the risk of cancer in both kidneys and other organs for patients and their at-risk family members. Our study suggests that patients with early-onset kidney cancer should undergo comprehensive genetic risk assessment.
Copyright © 2021 European Association of Urology. Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Early-onset renal cell carcinoma; Genetic counseling; Germline sequencing; Hereditary renal cell carcinoma syndromes; Kidney cancer

Mesh:

Year:  2021        PMID: 34654685      PMCID: PMC8688197          DOI: 10.1016/j.euo.2021.09.005

Source DB:  PubMed          Journal:  Eur Urol Oncol        ISSN: 2588-9311


  19 in total

1.  FACETS: allele-specific copy number and clonal heterogeneity analysis tool for high-throughput DNA sequencing.

Authors:  Ronglai Shen; Venkatraman E Seshan
Journal:  Nucleic Acids Res       Date:  2016-06-07       Impact factor: 16.971

2.  Advances in the diagnosis of hereditary kidney cancer: Initial results of a multigene panel test.

Authors:  Kevin A Nguyen; Jamil S Syed; Carin R Espenschied; Holly LaDuca; Ansh M Bhagat; Alfredo Suarez-Sarmiento; Timothy K O'Rourke; Karina L Brierley; Erin W Hofstatter; Brian Shuch
Journal:  Cancer       Date:  2017-08-08       Impact factor: 6.860

3.  Mutation Detection in Patients With Advanced Cancer by Universal Sequencing of Cancer-Related Genes in Tumor and Normal DNA vs Guideline-Based Germline Testing.

Authors:  Diana Mandelker; Liying Zhang; Yelena Kemel; Zsofia K Stadler; Vijai Joseph; Ahmet Zehir; Nisha Pradhan; Angela Arnold; Michael F Walsh; Yirong Li; Anoop R Balakrishnan; Aijazuddin Syed; Meera Prasad; Khedoudja Nafa; Maria I Carlo; Karen A Cadoo; Meg Sheehan; Megan H Fleischut; Erin Salo-Mullen; Magan Trottier; Steven M Lipkin; Anne Lincoln; Semanti Mukherjee; Vignesh Ravichandran; Roy Cambria; Jesse Galle; Wassim Abida; Marcia E Arcila; Ryma Benayed; Ronak Shah; Kenneth Yu; Dean F Bajorin; Jonathan A Coleman; Steven D Leach; Maeve A Lowery; Julio Garcia-Aguilar; Philip W Kantoff; Charles L Sawyers; Maura N Dickler; Leonard Saltz; Robert J Motzer; Eileen M O'Reilly; Howard I Scher; Jose Baselga; David S Klimstra; David B Solit; David M Hyman; Michael F Berger; Marc Ladanyi; Mark E Robson; Kenneth Offit
Journal:  JAMA       Date:  2017-09-05       Impact factor: 56.272

4.  Cancer statistics, 2020.

Authors:  Rebecca L Siegel; Kimberly D Miller; Ahmedin Jemal
Journal:  CA Cancer J Clin       Date:  2020-01-08       Impact factor: 508.702

5.  Prevalence of Germline Mutations in Cancer Susceptibility Genes in Patients With Advanced Renal Cell Carcinoma.

Authors:  Maria I Carlo; Semanti Mukherjee; Diana Mandelker; Joseph Vijai; Yelena Kemel; Liying Zhang; Andrea Knezevic; Sujata Patil; Ozge Ceyhan-Birsoy; Kuo-Cheng Huang; Almedina Redzematovic; Devyn T Coskey; Carolyn Stewart; Nisha Pradhan; Angela G Arnold; A Ari Hakimi; Ying-Bei Chen; Jonathan A Coleman; David M Hyman; Marc Ladanyi; Karen A Cadoo; Michael F Walsh; Zsofia K Stadler; Chung-Han Lee; Darren R Feldman; Martin H Voss; Mark Robson; Robert J Motzer; Kenneth Offit
Journal:  JAMA Oncol       Date:  2018-09-01       Impact factor: 31.777

6.  Germline mutations of renal cancer predisposition genes and clinical relevance in Chinese patients with sporadic, early-onset disease.

Authors:  Junlong Wu; Hongkai Wang; Christopher J Ricketts; Youfeng Yang; Maria J Merino; Hailiang Zhang; Guohai Shi; Hualei Gan; W Marston Linehan; Yao Zhu; Dingwei Ye
Journal:  Cancer       Date:  2018-12-12       Impact factor: 6.860

7.  Germline Mutations in Predisposition Genes in Pediatric Cancer.

Authors:  Jinghui Zhang; Michael F Walsh; Gang Wu; Kim E Nichols; Michael N Edmonson; Tanja A Gruber; John Easton; Dale Hedges; Xiaotu Ma; Xin Zhou; Donald A Yergeau; Mark R Wilkinson; Bhavin Vadodaria; Xiang Chen; Rose B McGee; Stacy Hines-Dowell; Regina Nuccio; Emily Quinn; Sheila A Shurtleff; Michael Rusch; Aman Patel; Jared B Becksfort; Shuoguo Wang; Meaghann S Weaver; Li Ding; Elaine R Mardis; Richard K Wilson; Amar Gajjar; David W Ellison; Alberto S Pappo; Ching-Hon Pui; James R Downing
Journal:  N Engl J Med       Date:  2015-11-18       Impact factor: 91.245

8.  CORRIGENDUM: Recommendations for reporting of secondary findings in clinical exome and genome sequencing, 2016 update (ACMG SF v2.0): a policy statement of the American College of Medical Genetics and Genomics.

Authors: 
Journal:  Genet Med       Date:  2017-04       Impact factor: 8.822

9.  Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.

Authors:  Sue Richards; Nazneen Aziz; Sherri Bale; David Bick; Soma Das; Julie Gastier-Foster; Wayne W Grody; Madhuri Hegde; Elaine Lyon; Elaine Spector; Karl Voelkerding; Heidi L Rehm
Journal:  Genet Med       Date:  2015-03-05       Impact factor: 8.822

10.  Comprehensive detection of germline variants by MSK-IMPACT, a clinical diagnostic platform for solid tumor molecular oncology and concurrent cancer predisposition testing.

Authors:  Donavan T Cheng; Meera Prasad; Yvonne Chekaluk; Ryma Benayed; Justyna Sadowska; Ahmet Zehir; Aijazuddin Syed; Yan Elsa Wang; Joshua Somar; Yirong Li; Zarina Yelskaya; Donna Wong; Mark E Robson; Kenneth Offit; Michael F Berger; Khedoudja Nafa; Marc Ladanyi; Liying Zhang
Journal:  BMC Med Genomics       Date:  2017-05-19       Impact factor: 3.063

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  2 in total

1.  Differences in Cancer Phenotypes Among Frequent CHEK2 Variants and Implications for Clinical Care-Checking CHEK2.

Authors:  Brittany L Bychkovsky; Nihat B Agaoglu; Carolyn Horton; Jing Zhou; Amal Yussuf; Parichehr Hemyari; Marcy E Richardson; Colin Young; Holly LaDuca; Deborah L McGuinness; Rochelle Scheib; Judy E Garber; Huma Q Rana
Journal:  JAMA Oncol       Date:  2022-09-22       Impact factor: 33.006

2.  Pathogenic ATM and BAP1 germline mutations in a case of early-onset, familial sarcomatoid renal cancer.

Authors:  Hannah N Bell; Chandan Kumar-Sinha; Rahul Mannan; Dana Zakalik; Yuping Zhang; Rohit Mehra; Deepa Jagtap; Saravana M Dhanasekaran; Ulka Vaishampayan
Journal:  Cold Spring Harb Mol Case Stud       Date:  2022-04-28
  2 in total

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