| Literature DB >> 29977615 |
Ming-Zhen Yuan1, Ruo-An Han1, Chen-Xi Zhang1, You-Xin Chen1.
Abstract
PURPOSE: To assess the association of genes in the high-density lipoprotein metabolic pathway (HDLMP) with polypoidal choroidal vasculopathy (PCV) and the genetic difference in the HDLMP between PCV and age-related macular degeneration (AMD).Entities:
Year: 2018 PMID: 29977615 PMCID: PMC6011074 DOI: 10.1155/2018/9538671
Source DB: PubMed Journal: J Ophthalmol ISSN: 2090-004X Impact factor: 1.909
Characteristics of the included studies in the meta-analysis.
| First author and reference | Year | Ethnicity | Study design | Genotyping method | HWE reported | PCV | AMD | Control | Gene/loci investigated | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| Male ratio | Mean age ± SD (yrs) |
| Male ratio | Mean age ± SD (yrs) |
| Male ratio | Mean age ± SD (yrs) | |||||||
| Nakata et al. [ | 2013 | Japanese | 1 | TaqMan and Beadchip | Yes | 581 | 0.73 | 72.59 ± 8.13 | — | — | — | 793 | 0.41 | 65.99 ± 4.33 | CETP, LIPC, LPL |
| Zhang et al. [ | 2013 | Chinese | 1 | PCR | Yes | 250 | 0.66 | 65 ± 8.6 | 157 | 0.64 | 67 ± 9.21 | 204 | 0.61 | 69 ± 9 | LIPC, ABCA1, CETP, LPL, |
| Li et al. [ | 2014 | Chinese | 1 | PCR | Yes | 298 | 0.62 | 66.8 ± 9.7 | 300 | 0.63 | 69.4 ± 8.9 | 296 | 0.48 | 65.1 ± 9.5 | ABCA1 |
| Liu et al. [ | 2014 | Chinese | 1 | PCR | Yes | 233 | 0.7 | 68.5 ± 5.9 | 200 | 0.55 | 75.3 ± 7.7 | 275 | 0.44 | 74.3 ± 7.6 | ABCA1, LIPC, CETP, ABCG1 |
| Meng et al. [ | 2015 | Chinese | 1 | PCR | Yes | 291 | 0.79 | 66.6 ± 9.6 | 230 | 0.63 | 69.3 ± 8.8 | 221 | 0.48 | 67.2 ± 9.6 | CETP, LIPC, LPL |
| Li et al. [ | 2016 | Chinese (Hong Kong) | 1 | TaqMan and PCR | Yes | 236 | 0.69 | 68.5 ± 9 | 235 | 0.55 | 75.3 ± 7.6 | 365 | 0.42 | 74.4 ± 7.7 | ABCG1 |
| 2016 | Chinese (Shantou) | 1 | TaqMan and PCR | Yes | 187 | 0.72 | 63.1 ± 10.5 | 189 | 0.69 | 67.3 ± 10.1 | 670 | 0.43 | 73.8 ± 6.8 | ABCG1 | |
| 2016 | Japanese (Osaka) | 1 | TaqMan and PCR | Yes | 204 | 0.77 | 72.2 ± 8.0 | 192 | 0.67 | 74.3 ± 7.3 | 157 | 0.33 | 47.9 ± 15.1 | ABCG1 | |
| Qiao et al. [ | 2017 | Chinese (Hong Kong) | 1 | Beadchip | Yes | 156 | — | — | 310 | — | — | 1006 | — | — | CETP |
The characteristics of the eligible studies are shown. PCV: polypoidal choroidal vasculopathy; AMD: age-related macular degeneration; HWE: Hardy–Weinberg equilibrium.
Figure 1Flow diagram and results of literature review. The flow diagram describes the filtering process of related articles, including the number and reason of exclusion. PCV: polypoidal choroidal vasculopathy; AMD: age-related macular degeneration.
Figure 2Forest plot of 7 SNPs in PCV in allelic model. The figure shows specific odds ratios (ORs) for study. The size of the box is proportional to the weight of the study. Horizontal lines represent 95% confidence intervals (CIs). A diamond is on behalf of the summary OR with its corresponding 95% CI. (a) CETP rs3764261 (T); (b) LIPC rs493258 (G); (c) LIPC rs10468017 (T); (d) CETP rs2303790 (G); (e) ABVA1 rs1883025 (T); (f) LPL rs12678919 (G); (g) ABCG1 rs57137919 (A).
Meta-analysis of CETP/LIPC/LPL/ABCA1/ABCG1 polymorphisms in PCV.
| Region | Gene | Polymorphism | Ethnicity | Associated versus reference allele | Number of cohorts | Sample size (case/control) | OR (95% CI) |
|
|
|
|
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16q21 |
| rs3764261 | Asia | T versus G | 4 | 1355/1493 | 1.46 (1.28–1.665) | 5.64 | 0 | 0 | 0.308 | 0.415 |
| Chinese | T versus G | 3 | 774/700 | 1.528 (1.268–1.841) | 4.46 | 0 | 0 | >0.999 | 0.071 | |||
| 9q31 |
| rs1883025 | Chinese | T versus C | 3 | 781/775 | 0.968 (0.828–1.131) | 0.41 | 0.679 | 78.2 | >0.999 | 0.745 |
| 9q31 |
| rs493258 | Asia | G versus A | 3 | 1064/1272 | 1.041 (0.907–1.195) | 0.57 | 0.565 | 0 | >0.999 | 0.867 |
| 15q22 |
| rs10468017 | Chinese | T versus C | 3 | 774/700 | 0.849 (0.7–1.028) | 1.68 | 0.094 | 0 | >0.999 | 0.465 |
| 15q22 |
| rs12678919 | Asia | G versus A | 3 | 1122/1218 | 0.972 (0.814–1.161) | 0.32 | 0.751 | 0 | >0.999 | 0.799 |
| 21q22 |
| rs57137919 | Asia | A versus G | 4 | 860/1467 | 1.168 (1.016–1.343) | 2.18 | 0.029 | 61.5 | >0.999 | 0.808 |
| 16q21 | CETP | rs2303790 | Asia | G versus A | 5 | 1312/5479 | 1.57 (1.258–1.96) | 3.99 | 0 | 0 | >0.999 | 0.527 |
Summary of the allelic associations of CETP/LIPC/LPL/ABCA1/ABCG1 polymorphisms in PCV. PCV: polypoidal choroidal vasculopathy; AMD: age-related macular degeneration; OR: odds ratio; CI: confidence intervals.
Meta-analysis of CETP/LIPC/LPL/ABCA1/ABCG1 polymorphisms compared between PCV and AMD.
| Region | Gene | Polymorphism | Ethnicity | Associated versus reference allele | Number of cohorts | Sample size (PCV/AMD) | OR (95% CI) |
|
|
|
|
|
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16q21 |
| rs3764261 | Chinese | T versus G | 3 | 774/587 | 1.17 (0.971–1.409) | 1.65 | 0.178 | 33.6 | >0.999 | 0.572 |
| 9q31 |
| rs1883025 | Chinese | T versus C | 3 | 781/775 | 1.025 (0.869–1.208) | 0.29 | 0.77 | 0 | >0.999 | 0.832 |
| 9q31 |
| rs493258 | Chinese | G versus A | 2 | 483/357 | 1.123 (0.897–1.407) | 1.01 | 0.312 | 0 | >0.999 | — |
| 15q22 |
| rs10468017 | Chinese | T versus C | 3 | 774/587 | 1.101 (0.892–1.359) | 0.89 | 0.371 | 0 | 0.296 | 0.483 |
| 15q22 |
| rs12678919 | Asia | G versus A | 2 | 541/387 | 1.163 (0.861–1.572) | 0.98 | 0.325 | 0 | >0.999 | — |
| 21q22 |
| rs57137919 | Asia | A versus G | 4 | 860/816 | 1.208 (1.035–1.411) | 2.39 | 0.017 | 0 | 0.734 | 0.156 |
| 16q21 | CETP | rs2303790 | Asia | G versus A | 5 | 1312/1314 | 1.067 (0.825–1.378) | 0.49 | 0.622 | 0 | 0.462 | 0.299 |
Summary of the genetic difference in CETP/LIPC/LPL/ABCA1/ABCG1 polymorphisms between PCV and AMD is shown. PCV: polypoidal choroidal vasculopathy; AMD: age-related macular degeneration; OR: odds ratio; CI: confidence interval.
Figure 3Forest plot of SNPs compared between PCV and AMD in allelic model. The figure shows specific odds ratios (ORs) for study. The size of the box is proportional to the weight of the study. Horizontal lines represent 95% confidence intervals (CIs). A diamond is on behalf of the summary OR with its corresponding 95% CI. (a) ABCG1 rs57137919 (A); (b) CETP rs2303790 (G); (c) CETP rs3764261 (T); (d) ABCA1 rs1883025 (T); (e) LIPC rs493258 (G); (f) LIPC rs10468017 (T); (g) LPL rs12678919 (G).