Literature DB >> 27089177

A missense variant in FGD6 confers increased risk of polypoidal choroidal vasculopathy.

Lulin Huang1,2,3,4, Houbin Zhang1,4, Ching-Yu Cheng5,6,7, Feng Wen8, Pancy O S Tam8, Peiquan Zhao9, Haoyu Chen10, Zheng Li5,6,11, Lijia Chen12, Zhengfu Tai1,2,3,4, Kenji Yamashiro13, Shaoping Deng1,4, Xianjun Zhu1,4, Weiqi Chen10, Li Cai1, Fang Lu1, Yuanfeng Li1, Chui-Ming G Cheung5,6, Yi Shi1,4, Masahiro Miyake13, Yin Lin1,4, Bo Gong1, Xiaoqi Liu1, Kar-Seng Sim5,8,11, Jiyun Yang1, Keisuke Mori14, Xiongzhe Zhang8, Peter D Cackett5,15, Motokazu Tsujikawa16, Kohji Nishida16, Fang Hao1, Shi Ma1, He Lin1, Jing Cheng1, Ping Fei9, Timothy Y Y Lai12, Sibo Tang8, Augustinus Laude17, Satoshi Inoue18, Ian Y Yeo5,7, Yoichi Sakurada19, Yu Zhou1, Hiroyuki Iijima20, Shigeru Honda19, Chuntao Lei21, Lin Zhang1,4, Hong Zheng1, Dan Jiang1, Xiong Zhu1, Tien-Ying Wong5,6,7, Chiea-Chuen Khor5,6,11, Chi-Pui Pang12, Nagahisa Yoshimura13, Zhenglin Yang1,2,3,4.   

Abstract

Polypoidal choroidal vasculopathy (PCV), a subtype of 'wet' age-related macular degeneration (AMD), constitutes up to 55% of cases of wet AMD in Asian patients. In contrast to the choroidal neovascularization (CNV) subtype, the genetic risk factors for PCV are relatively unknown. Exome sequencing analysis of a Han Chinese cohort followed by replication in four independent cohorts identified a rare c.986A>G (p.Lys329Arg) variant in the FGD6 gene as significantly associated with PCV (P = 2.19 × 10(-16), odds ratio (OR) = 2.12) but not with CNV (P = 0.26, OR = 1.13). The intracellular localization of FGD6-Arg329 is distinct from that of FGD6-Lys329. In vitro, FGD6 could regulate proangiogenic activity, and oxidized phospholipids increased expression of FGD6. FGD6-Arg329 promoted more abnormal vessel development in the mouse retina than FGD6-Lys329. Collectively, our data suggest that oxidized phospholipids and FGD6-Arg329 might act synergistically to increase susceptibility to PCV.

Entities:  

Mesh:

Substances:

Year:  2016        PMID: 27089177     DOI: 10.1038/ng.3546

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  75 in total

1.  Pooled association tests for rare variants in exon-resequencing studies.

Authors:  Alkes L Price; Gregory V Kryukov; Paul I W de Bakker; Shaun M Purcell; Jeff Staples; Lee-Jen Wei; Shamil R Sunyaev
Journal:  Am J Hum Genet       Date:  2010-05-13       Impact factor: 11.025

2.  [Criteria for diagnosis of polypoidal choroidal vasculopathy].

Authors: 
Journal:  Nippon Ganka Gakkai Zasshi       Date:  2005-07

3.  Genome-wide association study identifies two susceptibility loci for exudative age-related macular degeneration in the Japanese population.

Authors:  Satoshi Arakawa; Atsushi Takahashi; Kyota Ashikawa; Naoya Hosono; Tomomi Aoi; Miho Yasuda; Yuji Oshima; Shigeo Yoshida; Hiroshi Enaida; Takashi Tsuchihashi; Keisuke Mori; Shigeru Honda; Akira Negi; Akira Arakawa; Kazuaki Kadonosono; Yutaka Kiyohara; Naoyuki Kamatani; Yusuke Nakamura; Tatsuro Ishibashi; Michiaki Kubo
Journal:  Nat Genet       Date:  2011-09-11       Impact factor: 38.330

4.  Automated diagnosis of Age-related Macular Degeneration using greyscale features from digital fundus images.

Authors:  Muthu Rama Krishnan Mookiah; U Rajendra Acharya; Joel E W Koh; Vinod Chandran; Chua Kuang Chua; Jen Hong Tan; Choo Min Lim; E Y K Ng; Kevin Noronha; Louis Tong; Augustinus Laude
Journal:  Comput Biol Med       Date:  2014-07-30       Impact factor: 4.589

5.  The Cdc42 guanine nucleotide exchange factor FGD6 coordinates cell polarity and endosomal membrane recycling in osteoclasts.

Authors:  Charlotte Steenblock; Tobias Heckel; Cornelia Czupalla; Ana Isabel Espírito Santo; Christian Niehage; Martin Sztacho; Bernard Hoflack
Journal:  J Biol Chem       Date:  2014-05-12       Impact factor: 5.157

6.  Complement factor H polymorphism and age-related macular degeneration.

Authors:  Albert O Edwards; Robert Ritter; Kenneth J Abel; Alisa Manning; Carolien Panhuysen; Lindsay A Farrer
Journal:  Science       Date:  2005-03-10       Impact factor: 47.728

7.  Complement factor H variant increases the risk of age-related macular degeneration.

Authors:  Jonathan L Haines; Michael A Hauser; Silke Schmidt; William K Scott; Lana M Olson; Paul Gallins; Kylee L Spencer; Shu Ying Kwan; Maher Noureddine; John R Gilbert; Nathalie Schnetz-Boutaud; Anita Agarwal; Eric A Postel; Margaret A Pericak-Vance
Journal:  Science       Date:  2005-03-10       Impact factor: 47.728

8.  Genes in the high-density lipoprotein metabolic pathway in age-related macular degeneration and polypoidal choroidal vasculopathy.

Authors:  Ke Liu; Li Jia Chen; Timothy Y Y Lai; Pancy O S Tam; Mary Ho; Sylvia W Y Chiang; David T L Liu; Alvin L Young; Zhenglin Yang; Chi Pui Pang
Journal:  Ophthalmology       Date:  2014-01-03       Impact factor: 12.079

9.  Comparison of choroidal thickness among patients with healthy eyes, early age-related maculopathy, neovascular age-related macular degeneration, central serous chorioretinopathy, and polypoidal choroidal vasculopathy.

Authors:  Seong-Woo Kim; Jaeryung Oh; Soon-Sun Kwon; Junho Yoo; Kuhl Huh
Journal:  Retina       Date:  2011-10       Impact factor: 4.256

10.  Analysis of 6,515 exomes reveals the recent origin of most human protein-coding variants.

Authors:  Wenqing Fu; Timothy D O'Connor; Goo Jun; Hyun Min Kang; Goncalo Abecasis; Suzanne M Leal; Stacey Gabriel; Mark J Rieder; David Altshuler; Jay Shendure; Deborah A Nickerson; Michael J Bamshad; Joshua M Akey
Journal:  Nature       Date:  2012-11-28       Impact factor: 49.962

View more
  25 in total

1.  A comparison of risk factors for age-related macular degeneration and polypoidal choroidal vasculopathy in Chinese patients.

Authors:  Xiao-Li Chen; Qin-Rui Hu; Yu-Jing Bai; Yu Deng; Hai-Wei Wang; Shan Liu; Yin-Lin Wang; Yan-Kun Yue
Journal:  Graefes Arch Clin Exp Ophthalmol       Date:  2018-06-01       Impact factor: 3.117

2.  Shared genetic variants for polypoidal choroidal vasculopathy and typical neovascular age-related macular degeneration in East Asians.

Authors:  Qiao Fan; Chui Ming Gemmy Cheung; Li Jia Chen; Kenji Yamashiro; Jeeyun Ahn; Augustinus Laude; Ranjana Mathur; Chan Choi Mun; Ian Y Yeo; Tock Han Lim; Yik-Ying Teo; Chiea Chuen Khor; Kyu-Hyung Park; Nagahisa Yoshimura; Chi Pui Pang; Tien Yin Wong; Ching-Yu Cheng
Journal:  J Hum Genet       Date:  2017-08-24       Impact factor: 3.172

3.  Association of coding and UTR variants in the known regions with wet age-related macular degeneration in Han Chinese population.

Authors:  Lulin Huang; Xiongze Zhang; Pancy O S Tam; Haoyu Chen; Fang Hao; Chi-Pui Pang; Fen Wen; Zhenglin Yang
Journal:  J Hum Genet       Date:  2018-07-19       Impact factor: 3.172

4.  Association of HERPUD1 genetic variant rs2217332 with age-related macular degeneration and polypoidal choroidal vasculopathy in an Indian cohort.

Authors:  Lakshmi Priyankka Alagappan; Yazhini Ramaswamy; Deepak Kumar Sundaramoorthy; Joshitha Bhaskar; Sripriya Sarangapani; Parveen Sen; Rajiv Raman; Muna Bhende; Sinnakaruppan Mathavan
Journal:  Graefes Arch Clin Exp Ophthalmol       Date:  2022-10-12       Impact factor: 3.535

Review 5.  Genes and genetics in eye diseases: a genomic medicine approach for investigating hereditary and inflammatory ocular disorders.

Authors:  Mahavir Singh; Suresh C Tyagi
Journal:  Int J Ophthalmol       Date:  2018-01-18       Impact factor: 1.779

Review 6.  Asian age-related macular degeneration: from basic science research perspective.

Authors:  Yasuo Yanagi; Valencia Hui Xian Foo; Akitoshi Yoshida
Journal:  Eye (Lond)       Date:  2018-10-12       Impact factor: 3.775

7.  Untargeted metabolomics for uncovering plasma biological markers of wet age-related macular degeneration.

Authors:  Yanhui Deng; Ping Shuai; Haixin Wang; Shanshan Zhang; Jie Li; Mingyan Du; Peirong Huang; Chao Qu; Lulin Huang
Journal:  Aging (Albany NY)       Date:  2021-05-04       Impact factor: 5.682

Review 8.  Quality Control Measures and Validation in Gene Association Studies: Lessons for Acute Illness.

Authors:  Maria Cohen; Ashley J Lamparello; Lukas Schimunek; Fayten El-Dehaibi; Rami A Namas; Yan Xu; A Murat Kaynar; Timothy R Billiar; Yoram Vodovotz
Journal:  Shock       Date:  2020-03       Impact factor: 3.533

9.  The ER membrane protein complex subunit Emc3 controls angiogenesis via the FZD4/WNT signaling axis.

Authors:  Mu Yang; Shujin Li; Wenjing Liu; Xiao Li; Yunqi He; Yeming Yang; Kuanxiang Sun; Lin Zhang; Wanli Tian; Lixin Duan; Huafu Chen; Dezhong Yao; Zhenglin Yang; Xianjun Zhu
Journal:  Sci China Life Sci       Date:  2021-06-10       Impact factor: 6.038

10.  Upregulation of FGD6 Predicts Poor Prognosis in Gastric Cancer.

Authors:  Jianmin Zeng; Man Li; Huasheng Shi; Jianhui Guo
Journal:  Front Med (Lausanne)       Date:  2021-07-05
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.