Literature DB >> 29974865

MicroRNAs Overcome Cell Fate Barrier by Reducing EZH2-Controlled REST Stability during Neuronal Conversion of Human Adult Fibroblasts.

Seong Won Lee1, Young Mi Oh2, Ya-Lin Lu3, Woo Kyung Kim1, Andrew S Yoo4.   

Abstract

The ability to convert human somatic cells efficiently to neurons facilitates the utility of patient-derived neurons for studying neurological disorders. As such, ectopic expression of neuronal microRNAs (miRNAs), miR-9/9∗ and miR-124 (miR-9/9∗-124) in adult human fibroblasts has been found to evoke extensive reconfigurations of the chromatin and direct the fate conversion to neurons. However, how miR-9/9∗-124 break the cell fate barrier to activate the neuronal program remains to be defined. Here, we identified an anti-neurogenic function of EZH2 in fibroblasts that acts outside its role as a subunit of Polycomb Repressive Complex 2 to directly methylate and stabilize REST, a transcriptional repressor of neuronal genes. During neuronal conversion, miR-9/9∗-124 induced the repression of the EZH2-REST axis by downregulating USP14, accounting for the opening of chromatin regions harboring REST binding sites. Our findings underscore the interplay between miRNAs and protein stability cascade underlying the activation of neuronal program.
Copyright © 2018 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  ACTL6b; BAF complex; EZH2; REST; USP14; chromatin remodeling complex; microRNAs; neuronal reprogramming; protein modification; protein stability control

Mesh:

Substances:

Year:  2018        PMID: 29974865      PMCID: PMC6082428          DOI: 10.1016/j.devcel.2018.06.007

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  66 in total

1.  MicroRNA-mediated conversion of human fibroblasts to neurons.

Authors:  Andrew S Yoo; Alfred X Sun; Li Li; Aleksandr Shcheglovitov; Thomas Portmann; Yulong Li; Chris Lee-Messer; Ricardo E Dolmetsch; Richard W Tsien; Gerald R Crabtree
Journal:  Nature       Date:  2011-07-13       Impact factor: 49.962

2.  STAR: ultrafast universal RNA-seq aligner.

Authors:  Alexander Dobin; Carrie A Davis; Felix Schlesinger; Jorg Drenkow; Chris Zaleski; Sonali Jha; Philippe Batut; Mark Chaisson; Thomas R Gingeras
Journal:  Bioinformatics       Date:  2012-10-25       Impact factor: 6.937

3.  Ezh2 regulates adult hippocampal neurogenesis and memory.

Authors:  Juan Zhang; Fen Ji; Yanli Liu; Xuepei Lei; Hong Li; Guangju Ji; Zengqiang Yuan; Jianwei Jiao
Journal:  J Neurosci       Date:  2014-04-09       Impact factor: 6.167

4.  Mutations in EZH2 cause Weaver syndrome.

Authors:  William T Gibson; Rebecca L Hood; Shing Hei Zhan; Dennis E Bulman; Anthony P Fejes; Richard Moore; Andrew J Mungall; Patrice Eydoux; Riyana Babul-Hirji; Jianghong An; Marco A Marra; David Chitayat; Kym M Boycott; David D Weaver; Steven J M Jones
Journal:  Am J Hum Genet       Date:  2011-12-15       Impact factor: 11.025

5.  EZH2 generates a methyl degron that is recognized by the DCAF1/DDB1/CUL4 E3 ubiquitin ligase complex.

Authors:  Ji Min Lee; Jason S Lee; Hyunkyung Kim; Kyeongkyu Kim; Hyejin Park; Ji-Young Kim; Seung Hoon Lee; Ik Soo Kim; Joomyung Kim; Minkyoung Lee; Chin Ha Chung; Sang-Beom Seo; Jong-Bok Yoon; Eunyoung Ko; Dong-Young Noh; Keun Il Kim; Kyeong Kyu Kim; Sung Hee Baek
Journal:  Mol Cell       Date:  2012-10-11       Impact factor: 17.970

6.  SCFbeta-TRCP controls oncogenic transformation and neural differentiation through REST degradation.

Authors:  Thomas F Westbrook; Guang Hu; Xiaolu L Ang; Peter Mulligan; Natalya N Pavlova; Anthony Liang; Yumei Leng; Rene Maehr; Yang Shi; J Wade Harper; Stephen J Elledge
Journal:  Nature       Date:  2008-03-20       Impact factor: 49.962

7.  Ezh2 orchestrates topographic migration and connectivity of mouse precerebellar neurons.

Authors:  Thomas Di Meglio; Claudius F Kratochwil; Nathalie Vilain; Alberto Loche; Antonio Vitobello; Keisuke Yonehara; Steven M Hrycaj; Botond Roska; Antoine H F M Peters; Anne Eichmann; Deneen Wellik; Sebastien Ducret; Filippo M Rijli
Journal:  Science       Date:  2013-01-11       Impact factor: 47.728

8.  Enhancement of proteasome activity by a small-molecule inhibitor of USP14.

Authors:  Byung-Hoon Lee; Min Jae Lee; Soyeon Park; Dong-Chan Oh; Suzanne Elsasser; Ping-Chung Chen; Carlos Gartner; Nevena Dimova; John Hanna; Steven P Gygi; Scott M Wilson; Randall W King; Daniel Finley
Journal:  Nature       Date:  2010-09-09       Impact factor: 49.962

9.  REST and stress resistance in ageing and Alzheimer's disease.

Authors:  Tao Lu; Liviu Aron; Joseph Zullo; Ying Pan; Haeyoung Kim; Yiwen Chen; Tun-Hsiang Yang; Hyun-Min Kim; Derek Drake; X Shirley Liu; David A Bennett; Monica P Colaiácovo; Bruce A Yankner
Journal:  Nature       Date:  2014-03-19       Impact factor: 49.962

10.  An integrated encyclopedia of DNA elements in the human genome.

Authors: 
Journal:  Nature       Date:  2012-09-06       Impact factor: 49.962

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  24 in total

1.  MiR-124 synergism with ELAVL3 enhances target gene expression to promote neuronal maturity.

Authors:  Ya-Lin Lu; Yangjian Liu; Matthew J McCoy; Andrew S Yoo
Journal:  Proc Natl Acad Sci U S A       Date:  2021-06-01       Impact factor: 11.205

2.  CRISPR Activation Screens Systematically Identify Factors that Drive Neuronal Fate and Reprogramming.

Authors:  Yanxia Liu; Chen Yu; Timothy Patrick Daley; Fangyuan Wang; William S Cao; Salil Bhate; Xueqiu Lin; Chris Still; Honglei Liu; Dehua Zhao; Haifeng Wang; Xinmin S Xie; Sheng Ding; Wing Hung Wong; Marius Wernig; Lei S Qi
Journal:  Cell Stem Cell       Date:  2018-10-11       Impact factor: 24.633

3.  MicroRNAs miR-25, let-7 and miR-124 regulate the neurogenic potential of Müller glia in mice.

Authors:  Stefanie G Wohl; Marcus J Hooper; Thomas A Reh
Journal:  Development       Date:  2019-09-02       Impact factor: 6.868

Review 4.  The Proteasome and Its Network: Engineering for Adaptability.

Authors:  Daniel Finley; Miguel A Prado
Journal:  Cold Spring Harb Perspect Biol       Date:  2020-01-02       Impact factor: 10.005

Review 5.  MicroRNAs Instruct and Maintain Cell Type Diversity in the Nervous System.

Authors:  Norjin Zolboot; Jessica X Du; Federico Zampa; Giordano Lippi
Journal:  Front Mol Neurosci       Date:  2021-04-29       Impact factor: 5.639

6.  ATRX In-Frame Fusion Neuroblastoma Is Sensitive to EZH2 Inhibition via Modulation of Neuronal Gene Signatures.

Authors:  Zulekha A Qadeer; David Valle-Garcia; Dan Hasson; Zhen Sun; April Cook; Christie Nguyen; Aroa Soriano; Anqi Ma; Lyra M Griffiths; Maged Zeineldin; Dan Filipescu; Luz Jubierre; Asif Chowdhury; Orla Deevy; Xiang Chen; David B Finkelstein; Armita Bahrami; Elizabeth Stewart; Sara Federico; Soledad Gallego; Fumiko Dekio; Mary Fowkes; David Meni; John M Maris; William A Weiss; Stephen S Roberts; Nai-Kong V Cheung; Jian Jin; Miguel F Segura; Michael A Dyer; Emily Bernstein
Journal:  Cancer Cell       Date:  2019-10-17       Impact factor: 38.585

Review 7.  Direct cell reprogramming: approaches, mechanisms and progress.

Authors:  Haofei Wang; Yuchen Yang; Jiandong Liu; Li Qian
Journal:  Nat Rev Mol Cell Biol       Date:  2021-02-22       Impact factor: 113.915

8.  Generation of Induced Dopaminergic Neurons from Human Fetal Fibroblasts.

Authors:  Emilie M Legault; Janelle Drouin-Ouellet
Journal:  Methods Mol Biol       Date:  2021

Review 9.  Tumor Suppressive Effects of miR-124 and Its Function in Neuronal Development.

Authors:  Rikako Sanuki; Tomonori Yamamura
Journal:  Int J Mol Sci       Date:  2021-05-31       Impact factor: 5.923

Review 10.  Multifaceted Regulation of MicroRNA Biogenesis: Essential Roles and Functional Integration in Neuronal and Glial Development.

Authors:  Izabela Suster; Yue Feng
Journal:  Int J Mol Sci       Date:  2021-06-23       Impact factor: 5.923

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