Literature DB >> 29974268

Sub-picosecond proton tunnelling in deformed DNA hydrogen bonds under an asymmetric double-oscillator model.

J Luo1.   

Abstract

We present a model of proton tunnelling across DNA hydrogen bonds, compute the characteristic tunnelling time (CTT) from donor to acceptor and discuss its biological implications. The model is a double oscillator characterised by three geometry parameters describing planar deformations of the H bond, and a symmetry parameter representing the energy ratio between ground states in the individual oscillators. We discover that some values of the symmetry parameter lead to CTTs which are up to 40 orders of magnitude smaller than a previous model predicted. Indeed, if the symmetry parameter is sufficiently far from its extremal values of 1 or 0, then the proton's CTT under any physically realistic planar deformation is guaranteed to be below one picosecond, which is a biologically relevant time-scale. This supports theories of links between proton tunnelling and biological processes such as spontaneous mutation.

Entities:  

Keywords:  Living systems: Cellular Processes

Mesh:

Substances:

Year:  2018        PMID: 29974268     DOI: 10.1140/epje/i2018-11690-y

Source DB:  PubMed          Journal:  Eur Phys J E Soft Matter        ISSN: 1292-8941            Impact factor:   1.890


  4 in total

1.  A quantum mechanical model of adaptive mutation.

Authors:  J McFadden; J Al-Khalili
Journal:  Biosystems       Date:  1999-06       Impact factor: 1.973

2.  A standard reference frame for the description of nucleic acid base-pair geometry.

Authors:  W K Olson; M Bansal; S K Burley; R E Dickerson; M Gerstein; S C Harvey; U Heinemann; X J Lu; S Neidle; Z Shakked; H Sklenar; M Suzuki; C S Tung; E Westhof; C Wolberger; H M Berman
Journal:  J Mol Biol       Date:  2001-10-12       Impact factor: 5.469

3.  Resolving the discrepancies among nucleic acid conformational analyses.

Authors:  X J Lu; W K Olson
Journal:  J Mol Biol       Date:  1999-01-29       Impact factor: 5.469

4.  Definitions and nomenclature of nucleic acid structure components.

Authors:  R E Dickerson
Journal:  Nucleic Acids Res       Date:  1989-03-11       Impact factor: 16.971

  4 in total

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