Literature DB >> 29961174

Molecular analysis of an asbestos-exposed Belgian family with a high prevalence of mesothelioma.

Marieke Hylebos1,2, Ken Op de Beeck1,2, Jenneke van den Ende1, Patrick Pauwels2,3, Martin Lammens2,3, Jan P van Meerbeeck4,5, Guy Van Camp1,2.   

Abstract

Familial clustering of malignant mesothelioma (MM) has been linked to the presence of germline mutations in BAP1. However, families with multiple MM patients, without segregating BAP1 mutation were described, suggesting the existence of other predisposing genetic factors. In this study, we report a previously undescribed Belgian family, in which BAP1 was found to be absent in the epithelial malignant mesothelial cells of the index patient. Whole exome analysis did not reveal a germline or somatic BAP1 variant. Also, no germline or somatic copy number changes in the BAP1 region could be identified. However, germline variants, predicted to be damaging, were detected in 11 other 'Cancer census genes' (i.e. MPL, RBM15, TET2, FAT1, HLA-A, EGFR, KMT2C, BRD3, NOTCH1, RB1 and MYO5A). Of these, the one in RBM15 seems to be the most interesting given its low minor allele frequency and absence in the germline DNA of the index patient's mother. The importance of this 'Cancer census gene' in familial MM clustering needs to be evaluated further. Nevertheless, this study strengthens the suspicion that, next to germline BAP1 alterations, other genetic factors might predispose families to the development of MM.

Entities:  

Keywords:  BAP1; Cancer census genes; Cancer predisposition; Familial cancer; Malignant mesothelioma

Mesh:

Substances:

Year:  2018        PMID: 29961174     DOI: 10.1007/s10689-018-0095-1

Source DB:  PubMed          Journal:  Fam Cancer        ISSN: 1389-9600            Impact factor:   2.375


  37 in total

1.  Fusion of two novel genes, RBM15 and MKL1, in the t(1;22)(p13;q13) of acute megakaryoblastic leukemia.

Authors:  Z Ma; S W Morris; V Valentine; M Li; J A Herbrick; X Cui; D Bouman; Y Li; P K Mehta; D Nizetic; Y Kaneko; G C Chan; L C Chan; J Squire; S W Scherer; J K Hitzler
Journal:  Nat Genet       Date:  2001-07       Impact factor: 38.330

2.  Germline BAP1 mutation predisposes to uveal melanoma, lung adenocarcinoma, meningioma, and other cancers.

Authors:  Mohamed H Abdel-Rahman; Robert Pilarski; Colleen M Cebulla; James B Massengill; Benjamin N Christopher; Getachew Boru; Peter Hovland; Frederick H Davidorf
Journal:  J Med Genet       Date:  2011-09-22       Impact factor: 6.318

3.  MutationTaster2: mutation prediction for the deep-sequencing age.

Authors:  Jana Marie Schwarz; David N Cooper; Markus Schuelke; Dominik Seelow
Journal:  Nat Methods       Date:  2014-04       Impact factor: 28.547

4.  The nuclear deubiquitinase BAP1 is commonly inactivated by somatic mutations and 3p21.1 losses in malignant pleural mesothelioma.

Authors:  Matthew Bott; Marie Brevet; Barry S Taylor; Shigeki Shimizu; Tatsuo Ito; Lu Wang; Jenette Creaney; Richard A Lake; Maureen F Zakowski; Boris Reva; Chris Sander; Robert Delsite; Simon Powell; Qin Zhou; Ronglai Shen; Adam Olshen; Valerie Rusch; Marc Ladanyi
Journal:  Nat Genet       Date:  2011-06-05       Impact factor: 38.330

5.  Germline mutations in DNA repair genes predispose asbestos-exposed patients to malignant pleural mesothelioma.

Authors:  Marta Betti; Elisabetta Casalone; Daniela Ferrante; Anna Aspesi; Giulia Morleo; Alessandra Biasi; Marika Sculco; Giuseppe Mancuso; Simonetta Guarrera; Luisella Righi; Federica Grosso; Roberta Libener; Mansueto Pavesi; Narciso Mariani; Caterina Casadio; Renzo Boldorini; Dario Mirabelli; Barbara Pasini; Corrado Magnani; Giuseppe Matullo; Irma Dianzani
Journal:  Cancer Lett       Date:  2017-07-04       Impact factor: 8.679

6.  Involvement of a human gene related to the Drosophila spen gene in the recurrent t(1;22) translocation of acute megakaryocytic leukemia.

Authors:  T Mercher; M B Coniat; R Monni; M Mauchauffe; F Nguyen Khac; L Gressin; F Mugneret; T Leblanc; N Dastugue; R Berger; O A Bernard
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-08       Impact factor: 11.205

7.  Hereditary uveal melanoma: a report of a germline mutation in BAP1.

Authors:  Veronica Höiom; Daniel Edsgärd; Hildur Helgadottir; Hanna Eriksson; Charlotta All-Ericsson; Rainer Tuominen; Ivayla Ivanova; Joakim Lundeberg; Olof Emanuelsson; Johan Hansson
Journal:  Genes Chromosomes Cancer       Date:  2013-01-23       Impact factor: 5.006

8.  A recurrent germline BAP1 mutation and extension of the BAP1 tumor predisposition spectrum to include basal cell carcinoma.

Authors:  K A W Wadt; L G Aoude; P Johansson; A Solinas; A Pritchard; O Crainic; M T Andersen; J F Kiilgaard; S Heegaard; L Sunde; B Federspiel; J Madore; J F Thompson; S W McCarthy; A Goodwin; H Tsao; G Jönsson; K Busam; R Gupta; J M Trent; A-M Gerdes; K M Brown; R A Scolyer; N K Hayward
Journal:  Clin Genet       Date:  2014-11-06       Impact factor: 4.438

9.  Germline mutations in BAP1 predispose to melanocytic tumors.

Authors:  Thomas Wiesner; Anna C Obenauf; Rajmohan Murali; Isabella Fried; Klaus G Griewank; Peter Ulz; Christian Windpassinger; Werner Wackernagel; Shea Loy; Ingrid Wolf; Agnes Viale; Alex E Lash; Mono Pirun; Nicholas D Socci; Arno Rütten; Gabriele Palmedo; David Abramson; Kenneth Offit; Arthur Ott; Jürgen C Becker; Lorenzo Cerroni; Heinz Kutzner; Boris C Bastian; Michael R Speicher
Journal:  Nat Genet       Date:  2011-08-28       Impact factor: 38.330

10.  VariantDB: a flexible annotation and filtering portal for next generation sequencing data.

Authors:  Geert Vandeweyer; Lut Van Laer; Bart Loeys; Tim Van den Bulcke; R Frank Kooy
Journal:  Genome Med       Date:  2014-10-02       Impact factor: 11.117

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