Literature DB >> 29945740

A longitudinal human phantom reliability study of multi-center T1-weighted, DTI, and resting state fMRI data.

Colin Hawco1, Joseph D Viviano2, Sofia Chavez1, Erin W Dickie2, Navona Calarco2, Peter Kochunov3, Miklos Argyelan4, Jessica A Turner5, Anil K Malhotra6, Robert W Buchanan3, Aristotle N Voineskos7.   

Abstract

Multi-center MRI studies can enhance power, generalizability, and discovery for clinical neuroimaging research in brain disorders. Here, we sought to establish the utility of a clustering algorithm as an alternative to more traditional intra-class correlation coefficient approaches in a longitudinal multi-center human phantom study. We completed annual reliability scans on 'travelling human phantoms'. Acquisitions across sites were harmonized prospectively. Twenty-seven MRI sessions were available across four participants, scanned on five scanners, across three years. For each scan, three metrics were extracted: cortical thickness (CT), white matter fractional anisotropy (FA), and resting state functional connectivity (FC). For each metric, hierarchical clustering (Ward's method) was performed. The cluster solutions were compared to participant and scanner using the adjusted Rand index (ARI). For all metrics, data clustered by participant rather than by scanner (ARI > 0.8 comparing clusters to participants, ARI < 0.2 comparing clusters to scanners). These results demonstrate that hierarchical clustering can reliably identify structural and functional scans from different participants imaged on different scanners across time. With increasing interest in data-driven approaches in psychiatric and neurologic brain imaging studies, our findings provide a framework for multi-center analytic approaches aiming to identify subgroups of participants based on brain structure or function.
Copyright © 2018. Published by Elsevier B.V.

Entities:  

Keywords:  Cortical thickness; DTI; Fractional anisotropy; Functional connectivity; Hierarchical clustering; Human phantoms; Multi-site; Scanner reliability; Scanner variability; T1; rsfMRI

Mesh:

Year:  2018        PMID: 29945740      PMCID: PMC6482446          DOI: 10.1016/j.pscychresns.2018.06.004

Source DB:  PubMed          Journal:  Psychiatry Res Neuroimaging        ISSN: 0925-4927            Impact factor:   2.376


  57 in total

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Authors:  Thomas Insel; Bruce Cuthbert; Marjorie Garvey; Robert Heinssen; Daniel S Pine; Kevin Quinn; Charles Sanislow; Philip Wang
Journal:  Am J Psychiatry       Date:  2010-07       Impact factor: 18.112

2.  Retrospective motion correction protocol for high-resolution anatomical MRI.

Authors:  Peter Kochunov; Jack L Lancaster; David C Glahn; David Purdy; Angela R Laird; Feng Gao; Peter Fox
Journal:  Hum Brain Mapp       Date:  2006-12       Impact factor: 5.038

Review 3.  Intraclass correlations: uses in assessing rater reliability.

Authors:  P E Shrout; J L Fleiss
Journal:  Psychol Bull       Date:  1979-03       Impact factor: 17.737

4.  Longitudinal reproducibility of default-mode network connectivity in healthy elderly participants: A multicentric resting-state fMRI study.

Authors:  Jorge Jovicich; Ludovico Minati; Moira Marizzoni; Rocco Marchitelli; Roser Sala-Llonch; David Bartrés-Faz; Jennifer Arnold; Jens Benninghoff; Ute Fiedler; Luca Roccatagliata; Agnese Picco; Flavio Nobili; Oliver Blin; Stephanie Bombois; Renaud Lopes; Régis Bordet; Julien Sein; Jean-Philippe Ranjeva; Mira Didic; Hélène Gros-Dagnac; Pierre Payoux; Giada Zoccatelli; Franco Alessandrini; Alberto Beltramello; Núria Bargalló; Antonio Ferretti; Massimo Caulo; Marco Aiello; Carlo Cavaliere; Andrea Soricelli; Lucilla Parnetti; Roberto Tarducci; Piero Floridi; Magda Tsolaki; Manos Constantinidis; Antonios Drevelegas; Paolo Maria Rossini; Camillo Marra; Peter Schönknecht; Tilman Hensch; Karl-Titus Hoffmann; Joost P Kuijer; Pieter Jelle Visser; Frederik Barkhof; Giovanni B Frisoni
Journal:  Neuroimage       Date:  2015-07-09       Impact factor: 6.556

5.  Reliability of an fMRI paradigm for emotional processing in a multisite longitudinal study.

Authors:  Dylan G Gee; Sarah C McEwen; Jennifer K Forsyth; Kristen M Haut; Carrie E Bearden; Jean Addington; Bradley Goodyear; Kristin S Cadenhead; Heline Mirzakhanian; Barbara A Cornblatt; Doreen Olvet; Daniel H Mathalon; Thomas H McGlashan; Diana O Perkins; Aysenil Belger; Larry J Seidman; Heidi Thermenos; Ming T Tsuang; Theo G M van Erp; Elaine F Walker; Stephan Hamann; Scott W Woods; Todd Constable; Tyrone D Cannon
Journal:  Hum Brain Mapp       Date:  2015-03-28       Impact factor: 5.038

6.  Harmonization of multi-site diffusion tensor imaging data.

Authors:  Jean-Philippe Fortin; Drew Parker; Birkan Tunç; Takanori Watanabe; Mark A Elliott; Kosha Ruparel; David R Roalf; Theodore D Satterthwaite; Ruben C Gur; Raquel E Gur; Robert T Schultz; Ragini Verma; Russell T Shinohara
Journal:  Neuroimage       Date:  2017-08-18       Impact factor: 6.556

7.  Resting-state connectivity biomarkers define neurophysiological subtypes of depression.

Authors:  Andrew T Drysdale; Logan Grosenick; Jonathan Downar; Katharine Dunlop; Farrokh Mansouri; Yue Meng; Robert N Fetcho; Benjamin Zebley; Desmond J Oathes; Amit Etkin; Alan F Schatzberg; Keith Sudheimer; Jennifer Keller; Helen S Mayberg; Faith M Gunning; George S Alexopoulos; Michael D Fox; Alvaro Pascual-Leone; Henning U Voss; B J Casey; Marc J Dubin; Conor Liston
Journal:  Nat Med       Date:  2016-12-05       Impact factor: 53.440

8.  Functional System and Areal Organization of a Highly Sampled Individual Human Brain.

Authors:  Timothy O Laumann; Evan M Gordon; Babatunde Adeyemo; Abraham Z Snyder; Sung Jun Joo; Mei-Yen Chen; Adrian W Gilmore; Kathleen B McDermott; Steven M Nelson; Nico U F Dosenbach; Bradley L Schlaggar; Jeanette A Mumford; Russell A Poldrack; Steven E Petersen
Journal:  Neuron       Date:  2015-07-23       Impact factor: 17.173

9.  A novel DTI-QA tool: Automated metric extraction exploiting the sphericity of an agar filled phantom.

Authors:  Sofia Chavez; Joseph Viviano; Mojdeh Zamyadi; Peter B Kingsley; Peter Kochunov; Stephen Strother; Aristotle Voineskos
Journal:  Magn Reson Imaging       Date:  2017-10-17       Impact factor: 2.546

10.  Reproducibility of structural, resting-state BOLD and DTI data between identical scanners.

Authors:  Lejian Huang; Xue Wang; Marwan N Baliki; Lei Wang; A Vania Apkarian; Todd B Parrish
Journal:  PLoS One       Date:  2012-10-25       Impact factor: 3.240

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  9 in total

1.  A longitudinal multi-scanner multimodal human neuroimaging dataset.

Authors:  Colin Hawco; Erin W Dickie; Gabrielle Herman; Jessica A Turner; Miklos Argyelan; Anil K Malhotra; Robert W Buchanan; Aristotle N Voineskos
Journal:  Sci Data       Date:  2022-06-14       Impact factor: 8.501

2.  Multiscale neural signatures of major depressive, anxiety, and stress-related disorders.

Authors:  Peter Zhukovsky; Michael Wainberg; Milos Milic; Shreejoy J Tripathy; Benoit H Mulsant; Daniel Felsky; Aristotle N Voineskos
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-01       Impact factor: 12.779

3.  Lifespan Volume Trajectories From Non-harmonized T1-Weighted MRI Do Not Differ After Site Correction Based on Traveling Human Phantoms.

Authors:  Sarah Treit; Emily Stolz; Julia N Rickard; Cheryl R McCreary; Mercedes Bagshawe; Richard Frayne; Catherine Lebel; Derek Emery; Christian Beaulieu
Journal:  Front Neurol       Date:  2022-05-09       Impact factor: 4.086

4.  Resting-State Connectivity Biomarkers of Cognitive Performance and Social Function in Individuals With Schizophrenia Spectrum Disorder and Healthy Control Subjects.

Authors:  Joseph D Viviano; Robert W Buchanan; Navona Calarco; James M Gold; George Foussias; Nikhil Bhagwat; Laura Stefanik; Colin Hawco; Pamela DeRosse; Miklos Argyelan; Jessica Turner; Sofia Chavez; Peter Kochunov; Peter Kingsley; Xiangzhi Zhou; Anil K Malhotra; Aristotle N Voineskos
Journal:  Biol Psychiatry       Date:  2018-04-13       Impact factor: 13.382

5.  Social Cognitive Networks and Social Cognitive Performance Across Individuals With Schizophrenia Spectrum Disorders and Healthy Control Participants.

Authors:  Lindsay D Oliver; Colin Hawco; Philipp Homan; Junghee Lee; Michael F Green; James M Gold; Pamela DeRosse; Miklos Argyelan; Anil K Malhotra; Robert W Buchanan; Aristotle N Voineskos
Journal:  Biol Psychiatry Cogn Neurosci Neuroimaging       Date:  2020-12-05

6.  Structural brain networks in remitted psychotic depression.

Authors:  Nicholas H Neufeld; Antonia N Kaczkurkin; Aristeidis Sotiras; Benoit H Mulsant; Erin W Dickie; Alastair J Flint; Barnett S Meyers; George S Alexopoulos; Anthony J Rothschild; Ellen M Whyte; Linda Mah; Jay Nierenberg; Matthew J Hoptman; Christos Davatzikos; Theodore D Satterthwaite; Aristotle N Voineskos
Journal:  Neuropsychopharmacology       Date:  2020-02-28       Impact factor: 8.294

7.  Greater Individual Variability in Functional Brain Activity during Working Memory Performance in young people with Autism and Executive Function Impairment.

Authors:  Colin Hawco; Laagishan Yoganathan; Aristotle N Voineskos; Rachael Lyon; Thomas Tan; Zafiris J Daskalakis; Daniel M Blumberger; Paul E Croarkin; Meng-Chuan Lai; Peter Szatmari; Stephanie H Ameis
Journal:  Neuroimage Clin       Date:  2020-04-23       Impact factor: 4.881

Review 8.  Insight Into the Effects of Clinical Repetitive Transcranial Magnetic Stimulation on the Brain From Positron Emission Tomography and Magnetic Resonance Imaging Studies: A Narrative Review.

Authors:  Lucero Aceves-Serrano; Jason L Neva; Doris J Doudet
Journal:  Front Neurosci       Date:  2022-02-21       Impact factor: 4.677

9.  Scanner invariant representations for diffusion MRI harmonization.

Authors:  Daniel Moyer; Greg Ver Steeg; Chantal M W Tax; Paul M Thompson
Journal:  Magn Reson Med       Date:  2020-04-06       Impact factor: 3.737

  9 in total

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