| Literature DB >> 29933592 |
Tao Zhang1, Gaia Scalabrino2, Neil Frankish3,4, Helen Sheridan5,6.
Abstract
PH46A is a single enantiomer and a member of the 1,2-indane dimer family. It has two contiguous stereogenic centers with S,S configurations, one of which being a quaternary center, which has been developed as a clinical candidate for the treatment of inflammatory and autoimmune conditions. The current synthetic route to PH46A involves the generation of an unwanted enantiomer (R,R)-7, thus reducing the final yield significantly. Therefore, we have investigated potential alternatives to improve the efficiency of this synthesis. The first phase of the study has demonstrated proof of principle for a chiral alkylation of ketone 3 using phase-transfer catalysis, providing a key intermediate ketone (S)-4. The parent alkaloids required for the synthesis of PH46A, quinine or cinchonidine, have also been identified. Promising enantiomeric excesses of up to 50% have been achieved to date, and the use of an alternative substrate, unsaturated ketone 9, has also opened up further avenues for optimisation in future studies. The second part of the study involved preliminary screening the effects of a panel of hydrolase enzymes on (rac)-4 in order to identify a potential chemo-enzymatic route to optimise the introduction of chirality into PH46A at early stage of the synthesis. The hydrolase module has also yielded positive results; enzyme AH-46 with MtBE providing a selectivity factor of 8.4 with enantiomeric excess of 77%. Overall, positive results were obtained in this proof of concept study described herein. It is believed that conditions of both chiral PTC alkylation and biocatalytic hydrolysis could be optimised to further enhance the selectivity and improve the overall yield. This work is currently ongoing.Entities:
Keywords: PH46A; bioactive indanes; biocatalysis; enantioselective; hydrolases; phase-transfer catalyst (PTC)
Mesh:
Substances:
Year: 2018 PMID: 29933592 PMCID: PMC6099954 DOI: 10.3390/molecules23071503
Source DB: PubMed Journal: Molecules ISSN: 1420-3049 Impact factor: 4.411
Scheme 1The current synthetic scheme of manufacturing PH46A [7,10]. Reagnets and Conditions: (I) trimethylsilyl trifluoromethanesulfonate, TEA, DCM, −70 °C to −75 °C, 3 h; (II) methyl 4-(bromomethyl)benzoate, potassium t-butoxide, MtBE, t-BuOH, room temperature, 3 h; (III) triisobutylaluminium (1.1 M) solution in toluene, toluene, −12 °C to 10 °C, 2 h; (IV) 30% NaOH, MeOH, reflux, 24 h; (V) chiral separation by simulated moving bed technology; (VI) N-methyl-d-glucamine, EtOH, water, 55 °C, 5 h.
Scheme 2(a) Synthesis of (S)-4 via proposed enantioselective benzylation of ketone 3 or unsaturated ketone 9; (b) synthesis of (S)-10 via proposed enantioselective biocatalytic hydrolysis of racemate (R,S)-4.
Scheme 3Synthetic scheme of chiral molecule standards (S)-4, (R)-4, (S)-10 and (R)-10.
Scheme 4(a) Alkylations of ketone 3 using chiral PTCs; (b) general structures of cinchona alkaloids derived PTCs.
Chiral PTC promoted alkylation of ketone 3 and t-butyl(4-bromomethyl)benzoate.
| Entry | PTC & Conditions | Time | e.e. (Major Enantiomer a) |
|---|---|---|---|
| 1A | <2 h | 11% ( | |
| 1B | <2 h | 12% ( | |
| 1C | <2 h | 12% ( | |
| 1D | 6 < t < 20 h | 24% ( | |
| 1E | 2 < t < 6 h | 4% ( | |
| 1F | 2 < t < 6 h | 12% ( | |
| 2A | <16 h RT | 22% ( | |
| 2B | <16 h RT | 25% ( | |
| 2C | <16 h RT | 25% ( | |
| 2D | 16 h RT + <6 h 70 °C | 34% ( | |
| 2E | <16 h RT | 23% ( | |
| 2F | <16 h RT | No expected product | |
| 2G | <16 h RT | 9% ( | |
| 2H | <16 h RT | No expected product | |
| 2I | <16 h RT | 14% ( | |
| 2J | <16 h RT | 19% ( | |
| 2K | >3 h 60 °C | 30% ( |
Conditions: 0.50 mmol each reactant & 20 mg PTC (Entries 1A–F:); 0.25 mmol each reactant & 10 mg PTC (Entries 2A–K). a S & R refer to the configuration of enantiomers eluted on the chiral IC column. b Within the likely margin of error for e.e. determination. c Ketone 3 conversion >90% by area after heating. d e.e. measured at ~30% ketone 3 conversion by area. TOL: toluene. e.e.: enantiomeric excess.
PTC Reactions using a Range of Catalysts.
| Entry | PTC Core | -CH2Ar | -OR′ | X− | Time | e.e. (Major Enantiomer a) |
|---|---|---|---|---|---|---|
| 3G | Cinchonine | -CH2(2-NO2-Ph) | -OH | Br− | >16 h b | 32% ( |
| 3H | Cinchonine | -CH2(2-MeO-Ph) | -OH | Br− | <16 h | 28% ( |
| 3I | Cinchonine | -CH2(2-CN-Ph) | -OH | Br− | <16 h | 15% ( |
| 3J | Cinchonine | -CH2(1-Np) | -OH | Cl− | <16 h | 27% ( |
| 3K | Cinchonine | -CH2(8-Me-1-Np) | -OH | Cl− | <16 h | 42% ( |
| 3L | Quinidine | -CH2(2-CN-Ph) | -OH | Br− | <16 h | 4% ( |
| 3M | Quinidine | -CH2(1-Np) | -OH | Cl− | <16 h | 33% ( |
| 3N | Quinidine | -CH2(2,4-Cl2-Ph) | -OH | Br− | <16 h | 7% ( |
| 3O | Quinidine | -CH2(2-Pyr) | -OH | Cl− | <16 h | 18% ( |
| 3P | Cinchonidine | -CH2Ph | -O-allyl | Br− | <16 h | 13% ( |
| 3Q | Cinchonidine | -CH2(9-anthryl) | -O-allyl | Br− | >16 h b | 7% ( |
| 3R | Cinchonidine | -CH2(9-anthryl) | -OH | Cl− | <16 h | 41% ( |
| 4S | Quinine | -CH2(3,5-di( | -OH | Br− | <16 h | 3% ( |
| 4T | Cinchonidine | -CH2(3,5-di( | -OH | Br− | <16 h | 11% ( |
| 4U | Quinine | -CH2C(O)(2-NO2-Ph) | -OH | Br− | ~16 h | 33% ( |
| 4V | Cinchonidine | -CH2C(O)(2-NO2-Ph) | -OH | Br− | >>16 h c | 23% ( |
| 4W | Quinine | -CH2(3,5-alkaloid+-Ph) d | -OH | Br− | ~16 h | 9% ( |
| 4X | Cinchonidine | -CH2(3,5-alkaloid+-Ph) d | -OH | Br− | <16 h | 12% ( |
| 4Y | Quinine | -CH2(4- | -OH | Br− | >16 h | 26% ( |
| 4Z | Cinchonidine | -CH2(4- | -OH | Br− | <16 h | 35% ( |
| 5K | Cinchonine | -CH2(8-Me-1-Np) | -OH | Cl− | >16 h | 46% ( |
| 5R | Cinchonidine | -CH2(9-anthryl) | -OH | Br− | >16 h | 38% ( |
Conditions: catalysts at 0.50 or 0.25 mmol scale, PTC (40 mg/mmol, except 14W & 14X at 100 mg/mmol), toluene (10 mL/mol), 25% aq. NaOH (2 mL/mmol) at room temperature. t-butyl ester alkylating agent was used in all reactions, except Entries 5K & 5R used methyl ester alkylating agent. a R or S refers to the configuration of the major enantiomer eluted on the chiral IC column. b <10% ketone 3 by area at 16 h. c Conversion <<50%. d Trimeric PTC. e Presumed species formed in situ.
Scheme 5Successful and unsuccessful attempts of bulky PTCs preparation.
Scheme 6Two possible routes for PTC promoted alkylation/elimination of ketone 3.
PTC Reactions of Unsaturated Ketone 9.
| Entry | PTC Core | -CH2Ar | -OR′ | e.e. (Major Enantiomer a) | X− | Reference e.e. of Reaction of Ketone 3 |
|---|---|---|---|---|---|---|
| 6D | Quinidine | -CH2(2-NO2-Ph) | -OH | 28% ( | Br− | 24% ( |
| 6K | Cinchonine | -CH2(8-Me-1-Np) | -OH | 50% ( | Cl− | 42% ( |
| 6R | Cinchonidine | -CH2(9-anthryl) | -OH | 50% ( | Cl− | 41% ( |
| 6Z | Cinchonidine | -CH2(4- | -OH | 43% ( | Br− | 35% ( |
Conditions: PTC 40 mg/mmol, selected catalysts 0.25 mmol scale, toluene 10 mL/mmol, 25% aq. NaOH 10 mL/mmol, RT, 21 h. a R or S refers to the configuration of the major enantiomer eluted on chiral IC column. b Presumed species formed in situ.
Positive hits for hydrolase screen of (rac)-4 using DMSO as cosolvent.
| Entry | Hydrolase | e.e. (Substrate) | e.e. (Product) | Major Enantiomer | E | Conversion |
|---|---|---|---|---|---|---|
| 7 | AH-06 | N/A | N/A | Racemic | N/A | Trace |
| 8 | AH-09 | 3% | 20% |
| 1.5 | 16% |
| 9 | AH-24 | N/A | N/A |
| N/A | Trace |
| 10 | AH-46 | 46% | 46% |
| 3 | 17% |
e.e.: enantiomeric excess. E: enantiomeric ratio. S or R refers to configuration.
Representative results of cosolvent screens of (rac)-4 with selected enzymes AH-09, AH-24 and AH-46.
| Entry | Hydrolase | Solvent | e.e. (Substrate) | e.e. (Product) | Major Product | E | Conversion |
|---|---|---|---|---|---|---|---|
| 11 | AH-09 | MtBE | 1% | 2% |
| <1 | 3% |
| 12 | AH-09 | Diethyl ether | 2% | 28% |
| 1.8 | 6% |
| 13 | AH-09 | Pentane | 1% | 8% |
| 1.2 | 9% |
| 14 | AH-09 | Hexane | 1% | 35% |
| 2.1 | 5% |
| 15 | AH-09 | DMSO | 3% | 20% |
| 1.5 | 16% |
| 16 | AH-09 | DMF | - | - | - | - | Trace |
| 17 | AH-09 | Dioxane | - | - | - | - | Trace |
| 18 | AH-46 | MtBE | 9% | 77% |
| 8.4 | 10% |
| 19 | AH-46 | Toluene | 6% | 73% |
| 6.8 | 8% |
| 20 | AH-46 | Pentane | 1% | 7% |
| 1.2 | 9% |
| 21 | AH-46 | Hexane | 1% | 13% |
| 1.3 | 9% |
| 22 | AH-46 | DMSO | 9% | 46% |
| 3 | 17% |
| 23 | AH-46 | Diethyl ether | - | - | - | - | Trace |
| 24 | AH-46 | Dioxane | - | - | - | - | Trace |
| 25 | AH-24 | DMSO | - | - |
| - | Trace |
| 26 | AH-24 | Ethanol | - | - | - | - | Trace |
| 27 | AH-24 | None | - | - | - | - | Trace |
e.e.: enantiomeric excess. E: enantiomeric ratio. S or R refers to configuration.
Figure 1Plot of substrate & product e.e. vs. conversion for kinetic resolution of (rac)-4.
Hydrolase enzymes used to screen against (rac)-4.
| Code | Hydrolase | Code | Hydrolase |
|---|---|---|---|
| AH-01 | Lipase A from | AH-25 | Lipase from |
| AH-02 | Lipase B from | AH-26 | Protease from |
| AH-03 | Lipase C from | AH-27 | Lipase from |
| AH-04 | Lipase from | AH-28 | Lipase from |
| AH-05 | Lipase from | AH-29 | Protease from |
| AH-06 | Lipase A from | AH-30 | Lipase from |
| AH-07 | Lipase D from | AH-31 | Protease from |
| AH-08 | Lipase E from | AH-32 | Lipase from |
| AH-09 | Lipase B from | AH-33 | Protease C from |
| AH-10 | Lipase F from | AH-34 | Protease B from |
| AH-11 | Lipase from | AH-35 | Lipase from |
| AH-12 | Protease A from | AH-36 | Lipase A from |
| AH-13 | Phytase | AH-37 | Lipase B from |
| AH-14 | Alkaline protease A | AH-38 | Lipase A from |
| AH-15 | Alkaline lipase A | AH-39 | Lipase from |
| AH-16 | Lipase from | AH-40 | Lipase from |
| AH-17 | Lipase from | AH-41 | Protease A from |
| AH-18 | Neutral protease A | AH-42 | Lipase B from |
| AH-19 | Alkaline protease B | AH-43 | Lipase A from |
| AH-20 | Acidic protease A | AH-44 | Protease B from |
| AH-21 | Protease A from | AH-45 | Lipase from |
| AH-22 | Protease B from | AH-46 | Lipase C from |
| AH-23 | Acylase from | AH-47 | Lipase Porcine |
| AH-24 | Lipase B from | AH-48 | Ficin |