| Literature DB >> 29930523 |
Victoria Hayman1, Thomas V Fernandez2.
Abstract
ADHD is a neurobiological disorder with a large worldwide prevalence causing significant impairment in children, adolescents, and adults. While there is general agreement about genetic contributions toward the disorder, progress in leveraging genetics to learn more about the biology and risk factors for ADHD has been limited. In this perspective, we identified 105 genes from the literature showing at least nominal statistical significance in association with ADHD. We analyzed these genes for enrichment in biological pathways and in known interacting biological networks. We also analyzed the expression patterns of candidate genes across brain regions and across periods of human development. From our analysis, we identify 14 genes that cluster within an interactive gene network, with enrichment in nitric oxide synthase and alpha-1 adrenergic pathways. Furthermore, these genes show enrichment for expression in the cerebellum during childhood through young adulthood, and in the cortex in adolescence and young adulthood. Gene discovery holds great potential for elucidating the unknown biological underpinnings of ADHD. Genome-wide sequencing efforts are underway and are likely to provide important insights that can be leveraged for new treatments and interventions.Entities:
Keywords: GWAS (genome-wide association study); attention-deficit/hyperactivity disorder; candidate gene association; cerebellum; copy number variation (CNV); expression profiling; network analysis; pathway analysis
Year: 2018 PMID: 29930523 PMCID: PMC5999780 DOI: 10.3389/fpsyt.2018.00251
Source DB: PubMed Journal: Front Psychiatry ISSN: 1664-0640 Impact factor: 4.157
Figure 1ADHD candidate gene network interaction analysis. Using the GeNets network analysis tool (https://apps.broadinstitute.org/genets), we mapped all 105 ADHD candidate genes obtained from the literature (see Supplementary Table S1) onto the InWeb3 meta-network to determine whether they are functionally connected. The density of the mapped network (density = number of edges/number of possible edges) was greater than 95% of randomly sampled gene sets, indicating that the network is significantly more connected than random (p < 2.3E-03). In the network, node (gene) size is proportional to the number of connections. The color is assigned by community, defined as a gene set that is more connected to one another than to another group of genes. Results from this analysis are available in interactive form here: https://www.broadinstitute.org/genets#/computations/5a5d08f9a81b0d6eff609b4b.
Selected ADHD candidate genes based on gene network interaction analysis.
| 1 | DIRAS family, GTP-binding RAS-like 2 | |
| 1 | glutamate receptor, ionotropic, N-methyl D-aspartate 2B | |
| 1 | glutamate receptor, metabotropic 1 | |
| 1 | nitric oxide synthase 1 (neuronal) | |
| 1 | parkin RBR E3 ubiquitin protein ligase | |
| 1 | synaptosomal-associated protein, 25kDa | |
| 1 | synaptotagmin II | |
| 2 | ataxia telangiectasia mutated | |
| 2 | calcium/calmodulin-dependent protein kinase II delta | |
| 2 | calcium/calmodulin-dependent protein kinase II gamma | |
| 2 | phosphodiesterase 4D, cAMP-specific | |
| 3 | adrenoceptor alpha 1A | |
| 3 | adrenoceptor alpha 1B | |
| 3 | solute carrier family 6 (neurotransmitter transporter, glycine), member 9 |