| Literature DB >> 29861846 |
Long Su1, YeHui Tan1, Hai Lin1, XiaoLiang Liu1, Li Yu2, YanPing Yang1, ShanShan Liu1, Ou Bai1, Yan Yang1, FengYan Jin1, JingNan Sun1, ChunShui Liu1, QiuJu Liu1, SuJun Gao1, Wei Li1.
Abstract
The aim of this study was to profile the spectrum of genetic mutations in acute myeloid leukemia (AML) patients co-occurring with CEBPA double mutation (CEBPAdm). Between January 1, 2012, and June 30, 2017, 553 consecutive patients with de novo AML were screened for CEBPA mutations. Out of these, 81 patients classified as CEBPAdm were analyzed further by a sensitive next-generation sequencing assay for mutations in 112 candidate genes. Within the CEBPA gene itself, we found 164 mutations. The most common mutated sites were c.936_937insGAG (n = 11/164, 6.71%) and c.939_940insAAG (n = 11/164, 6.71%), followed by c.68dupC (n = 10/164, 6.10%). The most common co-occurring mutations were found in the CSF3R (n = 16/81, 19.75%), WT1 (n = 15/81, 18.52%), and GATA2 (n = 13/81, 16.05%) genes. Patients with CSF3R mutations had an inferior four-year relapse-free survival (RFS) than those with the wild-type gene (15.3% versus 46.8%, respectively; P = 0.021). Patients with WT1 mutations had an inferior five-year RFS compared with those without such mutations (0% versus 26.6%, respectively, P = 0.003). However, GATA2, CSF3R, WT1 mutations had no significant influence on the overall survival. There were some differences in the location of mutational hotspots within the CEBPA gene, as well as hotspots of other co-occurring genetic mutations, between AML patients from Chinese and Caucasian populations. Some co-occurring mutations may be potential candidates for refining the prognoses of AML patients with CEBPAdm in the Chinese population.Entities:
Keywords: CEBPA mutations; Chinese population; acute myeloid leukemia; next generation sequencing; prognoses
Year: 2018 PMID: 29861846 PMCID: PMC5982761 DOI: 10.18632/oncotarget.23873
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
The characteristics of 81 AML patients with CEBPAdm
| Characteristics | Number of patients | Percentage |
|---|---|---|
| Age (years), median (range) | 44 (9 ~ 67) | |
| Gender | ||
| Male | 45 | 55.56% |
| Female | 36 | 44.44% |
| FAB classification | ||
| M1 | 2 | 2.47% |
| M2 | 47 | 58.02% |
| M4 | 24 | 29.63% |
| M5 | 5 | 6.17% |
| M6 | 3 | 3.70% |
| Cytogenetics | ||
| Normal karyotype | 60 | 92.31% |
| Abnormal karyotypes | 5 | 7.69% |
| Peripheral blood | ||
| White blood cells (×10^9/L) | 17.10 [8.84, 62.64] | |
| Hemoglobin (g/L) | 97.56 ± 27.85 | |
| Platelets (×10^9/L) | 23.00 [12.00, 41.00] | |
| Marrow blasts (%) | 61.00 ± 17.38 | |
Figure 1The mutation locations of CEBPA gene in AML patients with CEBPAdm
Figure 2Amino acid alterations in CEBPA protein in AML patients with CEBPAdm
Figure 3The distribution of co-occurring mutations in AML patients with CEBPAdm
Figure 4Relapse-free survival (A) and overall survival (B) in AML patients with CEBPAdm.
Figure 5The influence of CSF3R, WT1, and GATA2 mutations on outcomes in AML patients with CEBPAdm
Mutations of 112 genes analyzed in this study
| Number | Gene | Number | Gene | Number | Gene | Number | Gene |
|---|---|---|---|---|---|---|---|
| 1 | 29 | 57 | 85 | ||||
| 2 | 30 | 58 | 86 | ||||
| 3 | 31 | 59 | 87 | ||||
| 4 | 32 | 60 | 88 | ||||
| 5 | 33 | 61 | 89 | ||||
| 6 | 34 | 62 | 90 | ||||
| 7 | 35 | 63 | 91 | ||||
| 8 | 36 | 64 | 92 | ||||
| 9 | 37 | 65 | 93 | ||||
| 10 | 38 | 66 | 94 | ||||
| 11 | 39 | 67 | 95 | ||||
| 12 | 40 | 68 | 96 | ||||
| 13 | 41 | 69 | 97 | ||||
| 14 | 42 | 70 | 98 | ||||
| 15 | 43 | 71 | 99 | ||||
| 16 | 44 | 72 | 100 | ||||
| 17 | 45 | 73 | 101 | ||||
| 18 | 46 | 74 | 102 | ||||
| 19 | 47 | 75 | 103 | ||||
| 20 | 48 | 76 | 104 | ||||
| 21 | 49 | 77 | 105 | ||||
| 22 | 50 | 78 | 106 | ||||
| 23 | 51 | 79 | 107 | ||||
| 24 | 52 | 80 | 108 | ||||
| 25 | 53 | 81 | 109 | ||||
| 26 | 54 | 82 | 110 | ||||
| 27 | 55 | 83 | 111 | ||||
| 28 | 56 | 84 | 112 |
| Mutations (n = 16) | Wide-type (n = 65) | Mutations (n = 14) | Wide-type (n = 67) | Mutations (n = 13) | Wide-type (n = 68) | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| Age (years) | 38.88 ± 13.54 | 40.35 ± 14.52 | 28.14 ± 12.13 | 42.56 ± 13.46* | 37.38 ± 14.75 | 40.57 ± 14.22 | ||||
| Gender | ||||||||||
| Male | 10 (62.50%) | 35 (53.85%) | 10 (71.43%) | 35 (52.24%) | 8 (61.54%) | 37 (54.41%) | ||||
| Female | 6 (37.50%) | 30 (46.15%) | 4 (28.57%) | 32 (47.76%) | 5 (38.46%) | 31 (45.59%) | ||||
| FAB classification | ||||||||||
| M1 | 0 (0.00%) | 2 (3.08%) | 1 (7.14%) | 1 (1.49%) | 0 (0.00%) | 2 (2.94%) | ||||
| M2 | 6 (37.50%) | 33 (50.77%) | 6 (42.86%) | 33 (49.25%) | 10 (76.92%) | 29 (42.65%) | ||||
| M4 | 9 (56.25%) | 23 (35.38%) | 6 (42.86%) | 26 (38.81%) | 2 (15.38%) | 30 (44.12%) | ||||
| M5 | 1 (6.25%) | 4 (6.15%) | 1 (7.14%) | 4 (5.97%) | 1 (7.69%) | 4 (5.88%) | ||||
| M6 | 0 (0.00%) | 3 (4.62%) | 0 (0.00%) | 3 (4.48%) | 0 (0.00%) | 3 (4.41%) | ||||
| Cytogenetics | ||||||||||
| Normal karyotype | 12 (92.31%) | 48 (92.31%) | 9 (100.00%) | 51 (91.07%) | 11 (100.00%) | 49 (90.74%) | ||||
| Abnormal karyotypes | 1 (7.69%) | 4 (7.69%) | 0 (0.00%) | 5 (8.93%) | 0 (0.00%) | 5 (9.26%) | ||||
| Peripheral blood | ||||||||||
| White blood cells (×10^9/L) | 53.57 [28.76, 73.39] | 14.00 [7.33, 36.44]* | 36.22 [13.22, 121.31] | 16.36 [7.00, 50.00] * | 16.45 [11.44, 67.81] | 18.06 [8.48, 62.64] | ||||
| Hemoglobin (g/L) | 96.00 ± 25.10 | 97.94 ± 28.65 | 84.71 ± 27.94 | 100.24 ± 27.27 | 86.15 ± 28.57 | 99.74 ± 27.38 | ||||
| Platelets (×10^9/L) | 18.50 [11.25, 32.75] | 23.00 [13.50, 47.00]* | 23.00 [10.75, 46.50] | 23.00 [12.00, 40.00] | 25.00 [9.50, 43.50] | 23.00 [12.00, 39.75] | ||||
| Marrow blasts (%) | 53.63 ± 18.55 | 63.00 ± 16.66 | 62.07 ± 20.14 | 60.75± 16.86 | 59.23 ± 12.45 | 61.37 ± 18.31 | ||||
| Mutations (n = 12) | Wide-type (n = 69) | Mutations (n = 10) | Wide-type (n = 71) | |
|---|---|---|---|---|
| Age (years) | 37.38 ± 14.75 | 40.57 ± 14.22 | 44.10 ± 11.20 | 39.49 ± 14.61 |
| Gender | ||||
| Male | 6 (50.00%) | 39 (56.52%) | 3 (30.00%) | 42 (59.15%) |
| Female | 6 (50.00%) | 30 (43.48%) | 7 (70.00%) | 29 (40.85%) |
| FAB classification | ||||
| M1 | 1 (8.33%) | 1 (1.45%) | 1 (10.00%) | 1 (1.41%) |
| M2 | 6 (50.00%) | 33 (47.83%) | 6 (60.00%) | 33 (46.48%) |
| M4 | 2 (16.67%) | 30 (43.38%) | 3 (30.00%) | 29 (40.85%) |
| M5 | 3 (25.00%) | 2 (2.90%) | 0 (0.00%) | 5 (7.04%) |
| M6 | 0 (0.00%) | 3 (4.35%) | 0 (0.00%) | 3 (4.23%) |
| Cytogenetics | ||||
| Normal karyotype | 6 (75.00%) | 54 (94.74%) | 9 (90.00%) | 51 (92.73%) |
| Abnormal karyotypes | 2 (25.00%) | 3 (5.26%) | 1 (10.00%) | 4 (7.27%) |
| Peripheral blood | ||||
| White blood cells (×10^9/L) | 25.70 [9.72, 93.26] | 17.10 [8.43, 62.64] | 34.72 [21.35, 72.37] | 16.36 [7.66, 50.00] |
| Hemoglobin (g/L) | 86.15 ± 28.57 | 99.74 ± 27.38 | 87.80 ± 27.35 | 98.93 ± 27.83 |
| Platelets (×10^9/L) | 22.00 [14.00, 23.00] | 23.00 [12.00, 42.00] | 23.00 [12.50, 24.50] | 23.00 [12.00, 45.00] |
| Marrow blasts (%) | 59.23 ± 12.45 | 61.37 ± 18.31 | 69.49 ± 12.60 | 59.69 ± 17.72 |
* Compared with patients with mutations, P < 0.05.