Literature DB >> 29850978

TernaryNet: faster deep model inference without GPUs for medical 3D segmentation using sparse and binary convolutions.

Mattias P Heinrich1, Max Blendowski2, Ozan Oktay3.   

Abstract

PURPOSE: Deep convolutional neural networks (DCNN) are currently ubiquitous in medical imaging. While their versatility and high-quality results for common image analysis tasks including segmentation, localisation and prediction is astonishing, the large representational power comes at the cost of highly demanding computational effort. This limits their practical applications for image-guided interventions and diagnostic (point-of-care) support using mobile devices without graphics processing units (GPU).
METHODS: We propose a new scheme that approximates both trainable weights and neural activations in deep networks by ternary values and tackles the open question of backpropagation when dealing with non-differentiable functions. Our solution enables the removal of the expensive floating-point matrix multiplications throughout any convolutional neural network and replaces them by energy- and time-preserving binary operators and population counts.
RESULTS: We evaluate our approach for the segmentation of the pancreas in CT. Here, our ternary approximation within a fully convolutional network leads to more than 90% memory reductions and high accuracy (without any post-processing) with a Dice overlap of 71.0% that comes close to the one obtained when using networks with high-precision weights and activations. We further provide a concept for sub-second inference without GPUs and demonstrate significant improvements in comparison with binary quantisation and without our proposed ternary hyperbolic tangent continuation.
CONCLUSIONS: We present a key enabling technique for highly efficient DCNN inference without GPUs that will help to bring the advances of deep learning to practical clinical applications. It has also great promise for improving accuracies in large-scale medical data retrieval.

Keywords:  Deep learning; Hamming distance; Model compression; Pancreas; Segmentation; Sparsity

Mesh:

Year:  2018        PMID: 29850978     DOI: 10.1007/s11548-018-1797-4

Source DB:  PubMed          Journal:  Int J Comput Assist Radiol Surg        ISSN: 1861-6410            Impact factor:   2.924


  9 in total

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8.  Evaluation of Body-Wise and Organ-Wise Registrations For Abdominal Organs.

Authors:  Zhoubing Xu; Sahil A Panjwani; Christopher P Lee; Ryan P Burke; Rebeccah B Baucom; Benjamin K Poulose; Richard G Abramson; Bennett A Landman
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-03-21

9.  Evaluation of Six Registration Methods for the Human Abdomen on Clinically Acquired CT.

Authors:  Zhoubing Xu; Christopher P Lee; Mattias P Heinrich; Marc Modat; Daniel Rueckert; Sebastien Ourselin; Richard G Abramson; Bennett A Landman
Journal:  IEEE Trans Biomed Eng       Date:  2016-06-01       Impact factor: 4.538

  9 in total
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Authors:  Meixiang Huang; Chongfei Huang; Jing Yuan; Dexing Kong
Journal:  J Healthc Eng       Date:  2021-07-02       Impact factor: 2.682

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Authors:  Kinshuk Sengupta; Praveen Ranjan Srivastava
Journal:  BMC Med Inform Decis Mak       Date:  2021-07-30       Impact factor: 2.796

  4 in total

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