Literature DB >> 27127329

Evaluation of Body-Wise and Organ-Wise Registrations For Abdominal Organs.

Zhoubing Xu1, Sahil A Panjwani1, Christopher P Lee1, Ryan P Burke2, Rebeccah B Baucom3, Benjamin K Poulose3, Richard G Abramson4, Bennett A Landman5.   

Abstract

Identifying cross-sectional and longitudinal correspondence in the abdomen on computed tomography (CT) scans is necessary for quantitatively tracking change and understanding population characteristics, yet abdominal image registration is a challenging problem. The key difficulty in solving this problem is huge variations in organ dimensions and shapes across subjects. The current standard registration method uses the global or body-wise registration technique, which is based on the global topology for alignment. This method (although producing decent results) has substantial influence of outliers, thus leaving room for significant improvement. Here, we study a new image registration approach using local (organ-wise registration) by first creating organ-specific bounding boxes and then using these regions of interest (ROIs) for aligning references to target. Based on Dice Similarity Coefficient (DSC), Mean Surface Distance (MSD) and Hausdorff Distance (HD), the organ-wise approach is demonstrated to have significantly better results by minimizing the distorting effects of organ variations. This paper compares exclusively the two registration methods by providing novel quantitative and qualitative comparison data and is a subset of the more comprehensive problem of improving the multi-atlas segmentation by using organ normalization.

Entities:  

Keywords:  Organ localization; abdomen; image registration; random forest

Year:  2016        PMID: 27127329      PMCID: PMC4845963          DOI: 10.1117/12.2217082

Source DB:  PubMed          Journal:  Proc SPIE Int Soc Opt Eng        ISSN: 0277-786X


  14 in total

1.  Nonrigid registration using free-form deformations: application to breast MR images.

Authors:  D Rueckert; L I Sonoda; C Hayes; D L Hill; M O Leach; D J Hawkes
Journal:  IEEE Trans Med Imaging       Date:  1999-08       Impact factor: 10.048

2.  Slipping objects in image registration: improved motion field estimation with direction-dependent regularization.

Authors:  Alexander Schmidt-Richberg; Jan Ehrhardt; Rene Werner; Heinz Handels
Journal:  Med Image Comput Comput Assist Interv       Date:  2009

3.  Super-resolution registration using tissue-classified distance fields.

Authors:  G Elisabeta Marai; David H Laidlaw; Joseph J Crisco
Journal:  IEEE Trans Med Imaging       Date:  2006-02       Impact factor: 10.048

4.  Automated abdominal multi-organ segmentation with subject-specific atlas generation.

Authors:  Robin Wolz; Chengwen Chu; Kazunari Misawa; Michitaka Fujiwara; Kensaku Mori; Daniel Rueckert
Journal:  IEEE Trans Med Imaging       Date:  2013-06-03       Impact factor: 10.048

5.  Fast free-form deformation using graphics processing units.

Authors:  Marc Modat; Gerard R Ridgway; Zeike A Taylor; Manja Lehmann; Josephine Barnes; David J Hawkes; Nick C Fox; Sébastien Ourselin
Journal:  Comput Methods Programs Biomed       Date:  2009-10-08       Impact factor: 5.428

6.  Efficient multi-atlas abdominal segmentation on clinically acquired CT with SIMPLE context learning.

Authors:  Zhoubing Xu; Ryan P Burke; Christopher P Lee; Rebeccah B Baucom; Benjamin K Poulose; Richard G Abramson; Bennett A Landman
Journal:  Med Image Anal       Date:  2015-05-21       Impact factor: 8.545

7.  Piecewise-diffeomorphic image registration: application to the motion estimation between 3D CT lung images with sliding conditions.

Authors:  Laurent Risser; François-Xavier Vialard; Habib Y Baluwala; Julia A Schnabel
Journal:  Med Image Anal       Date:  2012-11-02       Impact factor: 8.545

8.  Regression forests for efficient anatomy detection and localization in computed tomography scans.

Authors:  A Criminisi; D Robertson; E Konukoglu; J Shotton; S Pathak; S White; K Siddiqui
Journal:  Med Image Anal       Date:  2013-01-27       Impact factor: 8.545

Review 9.  FSL.

Authors:  Mark Jenkinson; Christian F Beckmann; Timothy E J Behrens; Mark W Woolrich; Stephen M Smith
Journal:  Neuroimage       Date:  2011-09-16       Impact factor: 6.556

10.  Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration.

Authors:  Arno Klein; Jesper Andersson; Babak A Ardekani; John Ashburner; Brian Avants; Ming-Chang Chiang; Gary E Christensen; D Louis Collins; James Gee; Pierre Hellier; Joo Hyun Song; Mark Jenkinson; Claude Lepage; Daniel Rueckert; Paul Thompson; Tom Vercauteren; Roger P Woods; J John Mann; Ramin V Parsey
Journal:  Neuroimage       Date:  2009-01-13       Impact factor: 6.556

View more
  2 in total

1.  TernaryNet: faster deep model inference without GPUs for medical 3D segmentation using sparse and binary convolutions.

Authors:  Mattias P Heinrich; Max Blendowski; Ozan Oktay
Journal:  Int J Comput Assist Radiol Surg       Date:  2018-05-30       Impact factor: 2.924

2.  Comparing dual energy CT and subtraction CT on a phantom: which one provides the best contrast in iodine maps for sub-centimetre details?

Authors:  Evelinda Baerends; Luuk J Oostveen; Casper T Smit; Marco Das; Ioannis Sechopoulos; Monique Brink; Frank de Lange; Mathias Prokop
Journal:  Eur Radiol       Date:  2018-05-28       Impact factor: 5.315

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.