Literature DB >> 29846734

Modeling Hybridization Under the Network Multispecies Coalescent.

James H Degnan1.   

Abstract

Simultaneously modeling hybridization and the multispecies coalescent is becoming increasingly common, and inference of species networks in this context is now implemented in several software packages. This article addresses some of the conceptual issues and decisions to be made in this modeling, including whether or not to use branch lengths and issues with model identifiability. This article is based on a talk given at a Spotlight Session at Evolution 2017 meeting in Portland, Oregon. This session included several talks about modeling hybridization and gene flow in the presence of incomplete lineage sorting. Other talks given at this meeting are also included in this special issue of Systematic Biology.

Mesh:

Year:  2018        PMID: 29846734      PMCID: PMC6101600          DOI: 10.1093/sysbio/syy040

Source DB:  PubMed          Journal:  Syst Biol        ISSN: 1063-5157            Impact factor:   15.683


  87 in total

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Authors:  Laura S Kubatko; Bryan C Carstens; L Lacey Knowles
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8.  Estimation of hominoid ancestral population sizes under bayesian coalescent models incorporating mutation rate variation and sequencing errors.

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Authors:  Yun Yu; Luay Nakhleh
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  16 in total

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Journal:  Genetics       Date:  2019-01-22       Impact factor: 4.562

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5.  On the inference of complex phylogenetic networks by Markov Chain Monte-Carlo.

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6.  Rampant Genome-Wide Admixture across the Heliconius Radiation.

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7.  The rigid hybrid number for two phylogenetic trees.

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8.  Plastid phylogenomics of tribe Perseeae (Lauraceae) yields insights into the evolution of East Asian subtropical evergreen broad-leaved forests.

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9.  A Bayesian Implementation of the Multispecies Coalescent Model with Introgression for Phylogenomic Analysis.

Authors:  Tomáš Flouri; Xiyun Jiao; Bruce Rannala; Ziheng Yang
Journal:  Mol Biol Evol       Date:  2020-04-01       Impact factor: 16.240

10.  How to Tackle Phylogenetic Discordance in Recent and Rapidly Radiating Groups? Developing a Workflow Using Loricaria (Asteraceae) as an Example.

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